Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.7D98FQ Arachis hypogaea HOM05D000963 ORTHO05D004715 3.9e-63 244.6 119 100.0
arahy.Tifrunner.gnm1.ann1.U095GY Arachis hypogaea HOM05D000963 ORTHO05D004715 3.9e-63 244.6 119 100.0
arahy.Tifrunner.gnm1.ann1.00W2W5 Arachis hypogaea HOM05D000963 ORTHO05D004715 4.6e-24 114.8 82 76.8
arahy.Tifrunner.gnm1.ann1.KMV1WU Arachis hypogaea HOM05D000963 ORTHO05D004715 4.6e-24 114.8 82 76.8
arahy.Tifrunner.gnm1.ann1.P25ESR Arachis hypogaea HOM05D000963 ORTHO05D004715 4.6e-24 114.8 82 76.8
arahy.Tifrunner.gnm1.ann1.R0HXDD Arachis hypogaea HOM05D000963 ORTHO05D004715 4.6e-24 114.8 82 76.8
arahy.Tifrunner.gnm1.ann1.RJ0C0L Arachis hypogaea HOM05D000963 ORTHO05D004715 4.6e-24 114.8 82 76.8
arahy.Tifrunner.gnm1.ann1.Z5J7KL Arachis hypogaea HOM05D000963 ORTHO05D004715 4.6e-24 114.8 82 76.8
arahy.Tifrunner.gnm1.ann1.0QCF99 Arachis hypogaea HOM05D000963 ORTHO05D004715 7.9e-24 114.0 58 96.6
arahy.Tifrunner.gnm1.ann1.6K111H Arachis hypogaea HOM05D000963 ORTHO05D004715 7.9e-24 114.0 58 96.6
arahy.Tifrunner.gnm1.ann1.B9EW81 Arachis hypogaea HOM05D000963 ORTHO05D004715 7.9e-24 114.0 58 96.6
arahy.Tifrunner.gnm1.ann1.NMB5YK Arachis hypogaea HOM05D000963 ORTHO05D004715 7.9e-24 114.0 58 96.6
arahy.Tifrunner.gnm1.ann1.Q6P5E1 Arachis hypogaea HOM05D000963 ORTHO05D004715 7.9e-24 114.0 58 96.6
arahy.Tifrunner.gnm1.ann1.QIDR5S Arachis hypogaea HOM05D000963 ORTHO05D004715 7.9e-24 114.0 58 96.6
Sopen07g011090 Solanum pennellii HOM05D000963 ORTHO05D004715 1.0e-23 113.6 58 96.6
HPP92_028383 Vanilla planifolia HOM05D000963 ORTHO05D004715 3.0e-23 112.1 58 96.6
HPP92_028406 Vanilla planifolia HOM05D000963 ORTHO05D004715 3.0e-23 112.1 58 96.6
HPP92_028415 Vanilla planifolia HOM05D000963 ORTHO05D004715 3.0e-23 112.1 58 96.6
HPP92_028419 Vanilla planifolia HOM05D000963 ORTHO05D004715 3.0e-23 112.1 58 96.6
HPP92_028432 Vanilla planifolia HOM05D000963 ORTHO05D004715 3.0e-23 112.1 58 96.6
arahy.Tifrunner.gnm1.ann1.MEH7YS Arachis hypogaea HOM05D000963 ORTHO05D004715 8.7e-23 110.5 58 93.1
Lsat_1_v5_gn_4_68181 Lactuca sativa HOM05D008016 ORTHO05D010055 9.7e-22 107.1 82 72.0
arahy.Tifrunner.gnm1.ann1.BA1T4G Arachis hypogaea HOM05D000963 ORTHO05D004715 2.2e-21 105.9 58 91.4
Medtr7g012800 Medicago truncatula HOM05D000963 ORTHO05D004715 2.8e-21 105.5 55 92.7
arahy.Tifrunner.gnm1.ann1.V4KXIX Arachis hypogaea HOM05D009726 ORTHO05D010588 4.8e-21 104.8 91 56.0
arahy.Tifrunner.gnm1.ann1.PRQI1Y Arachis hypogaea HOM05D008016 ORTHO05D010588 5.3e-20 101.3 62 74.2
BolSC35t60714H Brassica oleracea HOM05D008016 ORTHO05D004271 6.9e-20 100.9 65 78.5
BolSC49t61153H Brassica oleracea HOM05D008016 ORTHO05D010588 6.9e-20 100.9 65 78.5
BraSC103t45496Z Brassica rapa HOM05D008016 ORTHO05D004271 6.9e-20 100.9 65 78.5
BolSC44t60832H Brassica oleracea HOM05D008016 ORTHO05D010588 5.9e-19 97.8 82 64.6
unitig_91.g26526 Utricularia gibba HOM05D000963 ORTHO05D010073 5.9e-19 97.8 51 94.1
arahy.Tifrunner.gnm1.ann1.FN06MZ Arachis hypogaea HOM05D000533 ORTHO05D006151 2.2e-18 95.9 44 100.0
Medtr4g006070 Medicago truncatula HOM05D000963 ORTHO05D010073 5.0e-18 94.7 47 95.7
Medtr4g451295 Medicago truncatula HOM05D000963 ORTHO05D010073 5.0e-18 94.7 47 95.7
arahy.Tifrunner.gnm1.ann1.3DS1LI Arachis hypogaea HOM05D004473 ORTHO05D005652 3.2e-17 92.0 46 95.7
arahy.Tifrunner.gnm1.ann1.SGP77C Arachis hypogaea HOM05D004473 ORTHO05D005652 3.2e-17 92.0 46 95.7
FAN06G1734 Fragaria x ananassa HOM05D000963 ORTHO05D010073 3.2e-17 92.0 46 95.7
arahy.Tifrunner.gnm1.ann1.27WM5S Arachis hypogaea HOM05D009726 ORTHO05D010588 4.2e-17 91.7 61 68.9
arahy.Tifrunner.gnm1.ann1.QZA5BL Arachis hypogaea HOM05D000963 ORTHO05D004715 1.0e-15 87.0 43 97.7
Nitab4.5_0003644g0060 Nicotiana tabacum HOM05D000963 ORTHO05D023713 5.1e-15 84.7 53 81.1
Sed0001563 Sechium edule HOM05D000963 ORTHO05D010073 2.8e-13 79.0 43 90.7
Sed0028031 Sechium edule HOM05D000963 ORTHO05D010073 2.8e-13 79.0 43 90.7
arahy.Tifrunner.gnm1.ann1.T4T886 Arachis hypogaea HOM05D009726 ORTHO05D010588 4.8e-13 78.2 47 74.5
BolSC47t61058H Brassica oleracea HOM05D008016 ORTHO05D010588 4.8e-13 78.2 65 63.1
DCAR_001145 Daucus carota HOM05D001966 ORTHO05D010055 1.8e-12 76.3 38 92.1
Oeu051749.1 Olea europaea HOM05D000963 ORTHO05D004715 1.8e-12 76.3 39 89.7
vmacro22395 Vaccinium macrocarpon HOM05D008016 ORTHO05D004271 1.8e-12 76.3 38 92.1
vmacro22417 Vaccinium macrocarpon HOM05D008354 ORTHO05D010055 1.8e-12 76.3 38 92.1
vmacro22420 Vaccinium macrocarpon HOM05D008016 ORTHO05D010055 1.8e-12 76.3 38 92.1
arahy.Tifrunner.gnm1.ann1.WRM2YP Arachis hypogaea HOM05D009726 ORTHO05D010588 3.1e-12 75.5 51 66.7
EL10As10g23964 Beta vulgaris HOM05D001966 ORTHO05D010055 3.1e-12 75.5 94 45.7
TPR.G31570 Trifolium pratense HOM05D000963 ORTHO05D004715 3.1e-12 75.5 52 75.0
LjContig00319g0016523 Lotus japonicus HOM05D000963 ORTHO05D010073 4.1e-12 75.1 35 97.1
VMungo1024G0003 Vigna mungo HOM05D009256 ORTHO05D011704 9.1e-12 73.9 57 70.2
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 1.2e-11 73.6 43 81.4
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 1.2e-11 73.6 43 81.4
Peaxi162Scf00687g00611 Petunia axillaris HOM05D001966 ORTHO05D010055 1.5e-11 73.2 61 62.3
Sed0006309 Sechium edule HOM05D010190 ORTHO05D009823 2.0e-11 72.8 35 94.3
FAN13G1706 Fragaria x ananassa HOM05D000963 ORTHO05D004715 5.9e-11 71.2 52 69.2
Hma1.2p1_0594F.1_g185800 Hydrangea macrophylla HOM05D001966 ORTHO05D010986 1.3e-10 70.1 34 91.2
Medtr5g080940 Medicago truncatula HOM05D000963 ORTHO05D004715 1.3e-10 70.1 34 97.1
Nitab4.5_0001761g0150 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.3e-10 70.1 32 96.9
FAN26G1474 Fragaria x ananassa HOM05D001966 ORTHO05D010986 1.7e-10 69.7 38 84.2
Solyc11g021160.1 Solanum lycopersicum HOM05D001966 ORTHO05D010055 1.7e-10 69.7 57 61.4
Nitab4.5_0001170g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 2.2e-10 69.3 37 83.8
CAN.G134.6 Capsicum annuum HOM05D008037 ORTHO05D004271 5.0e-10 68.2 38 84.2
arahy.Tifrunner.gnm1.ann1.CK4XFX Arachis hypogaea HOM05D009726 ORTHO05D010055 8.5e-10 67.4 119 41.2
arahy.Tifrunner.gnm1.ann1.LM30Y3 Arachis hypogaea HOM05D000963 ORTHO05D004715 8.5e-10 67.4 35 91.4
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 1.1e-09 67.0 34 88.2
Sed0000469 Sechium edule HOM05D010190 ORTHO05D009823 1.1e-09 67.0 36 88.9
HPP92_028386 Vanilla planifolia HOM05D009726 ORTHO05D010055 1.1e-09 67.0 40 77.5
EL10Ac6g14593 Beta vulgaris HOM05D001966 ORTHO05D010055 1.4e-09 66.6 29 100.0
BraSC58t46467Z Brassica rapa HOM05D008016 ORTHO05D010588 1.9e-09 66.2 50 72.0
Nitab4.5_0006502g0020 Nicotiana tabacum HOM05D001966 ORTHO05D010055 2.5e-09 65.9 38 76.3
Sopen10g016570 Solanum pennellii HOM05D008037 ORTHO05D004271 4.2e-09 65.1 38 78.9
Nitab4.5_0000002g0300 Nicotiana tabacum HOM05D001966 ORTHO05D010055 5.5e-09 64.7 47 63.8
SHI27036 Sapria himalayana HOM05D001966 ORTHO05D010986 5.5e-09 64.7 32 87.5
Nitab4.5_0008665g0040 Nicotiana tabacum HOM05D001070 ORTHO05D002096 7.2e-09 64.3 46 67.4
Sc25g0002020 Simmondsia chinensis HOM05D000963 ORTHO05D004715 1.2e-08 63.5 31 96.8
arahy.Tifrunner.gnm1.ann1.9FU6Q4 Arachis hypogaea HOM05D009726 ORTHO05D010588 1.6e-08 63.2 54 57.4
CAN.G1298.21 Capsicum annuum HOM05D000445 ORTHO05D000314 2.1e-08 62.8 38 76.3
arahy.Tifrunner.gnm1.ann1.JWI1UU Arachis hypogaea HOM05D009726 ORTHO05D010588 4.7e-08 61.6 39 74.4
arahy.Tifrunner.gnm1.ann1.R58SNE Arachis hypogaea HOM05D008016 ORTHO05D010055 4.7e-08 61.6 41 75.6
Nitab4.5_0003101g0110 Nicotiana tabacum HOM05D008354 ORTHO05D010055 6.1e-08 61.2 37 78.4
arahy.Tifrunner.gnm1.ann1.4W61NZ Arachis hypogaea HOM05D009726 ORTHO05D010588 7.9e-08 60.8 36 77.8
arahy.Tifrunner.gnm1.ann1.FTZ997 Arachis hypogaea HOM05D000445 ORTHO05D000314 1.4e-07 60.1 64 50.0
BolSC29t60497H Brassica oleracea HOM05D008016 ORTHO05D010588 1.4e-07 60.1 28 92.9
BolSC29t60538H Brassica oleracea HOM05D008016 ORTHO05D010986 1.4e-07 60.1 28 92.9
BolSC29t60557H Brassica oleracea HOM05D008016 ORTHO05D010588 1.4e-07 60.1 28 92.9
BolSC29t60625H Brassica oleracea HOM05D008016 ORTHO05D010588 1.4e-07 60.1 28 92.9
BolSC35t60682H Brassica oleracea HOM05D008016 ORTHO05D010588 1.4e-07 60.1 28 92.9
BolSC44t60813H Brassica oleracea HOM05D008016 ORTHO05D010588 1.4e-07 60.1 28 92.9
BolSC45t60920H Brassica oleracea HOM05D008016 ORTHO05D010588 1.4e-07 60.1 28 92.9
BolSC46t60968H Brassica oleracea HOM05D008016 ORTHO05D010588 1.4e-07 60.1 28 92.9
BraSC103t45418Z Brassica rapa HOM05D008016 ORTHO05D010588 1.4e-07 60.1 28 92.9
BraSC25t45901Z Brassica rapa HOM05D008016 ORTHO05D010588 1.4e-07 60.1 28 92.9
BraSC25t45922Z Brassica rapa HOM05D008016 ORTHO05D010588 1.4e-07 60.1 28 92.9
Hma1.2p1_0051F.1_g029250 Hydrangea macrophylla HOM05D000963 ORTHO05D004715 1.4e-07 60.1 29 96.6
BcaC05g27379 Brassica carinata HOM05D008016 ORTHO05D021751 6.7e-07 57.8 49 59.2
Sed0000516 Sechium edule HOM05D008037 ORTHO05D004271 8.8e-07 57.4 27 92.6
Sopen02g009090 Solanum pennellii HOM05D008037 ORTHO05D004271 2.0e-06 56.2 60 51.7
Sc02g0004570 Simmondsia chinensis HOM05D008037 ORTHO05D004271 7.4e-06 54.3 38 68.4
TAR022G0002 Trochodendron aralioides HOM05D003666 ORTHO05D004770 7.4e-06 54.3 56 53.6


User provided reference genes

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