Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.7C8SEE Arachis hypogaea HOM05D003720 ORTHO05D005312 2.2e-61 238.8 124 100.0
arahy.Tifrunner.gnm1.ann1.PTA25Z Arachis hypogaea HOM05D003720 ORTHO05D005312 1.4e-42 176.4 174 60.3
arahy.Tifrunner.gnm1.ann1.F3YJTF Arachis hypogaea HOM05D003720 ORTHO05D005312 2.5e-41 172.2 202 54.5
arahy.Tifrunner.gnm1.ann1.S8F21X Arachis hypogaea HOM05D003720 ORTHO05D005312 7.4e-41 170.6 202 54.0
Glyma.17G120500 Glycine max HOM05D003720 ORTHO05D005312 1.1e-39 166.8 202 53.0
Lj4g0009521 Lotus japonicus HOM05D003720 ORTHO05D005312 3.1e-39 165.2 202 53.0
TPR.G26776 Trifolium pratense HOM05D003720 ORTHO05D005312 3.1e-39 165.2 202 52.5
Glyma.05G012400 Glycine max HOM05D003720 ORTHO05D005312 4.1e-39 164.9 202 52.5
Medtr4g112045 Medicago truncatula HOM05D003720 ORTHO05D005312 5.3e-39 164.5 202 52.5
Phvul.003G176300 Phaseolus vulgaris HOM05D003720 ORTHO05D005312 9.1e-39 163.7 202 52.5
GSVIVG01015441001 Vitis vinifera HOM05D003720 ORTHO05D005312 1.2e-38 163.3 149 63.8
Psat4g042800 Pisum sativum HOM05D003720 ORTHO05D005312 1.5e-38 162.9 202 52.0
Lalb_Chr12g0197621 Lupinus albus HOM05D003720 ORTHO05D005312 4.5e-38 161.4 202 51.0
VMungo1215G1596 Vigna mungo HOM05D003720 ORTHO05D005312 4.5e-38 161.4 202 51.5
Ca_02544_v3 Cicer arietinum L. HOM05D003720 ORTHO05D005312 5.9e-38 161.0 202 51.5
QL02p086231 Quercus lobata HOM05D003720 ORTHO05D005312 7.7e-38 160.6 203 51.2
COL.COLO4_34940 Corchorus olitorius HOM05D003720 ORTHO05D005312 1.7e-37 159.5 203 50.7
Duzib168G1140 Durio zibethinus HOM05D003720 ORTHO05D005312 2.2e-37 159.1 203 51.2
CiPaw.03G235900 Carya illinoinensis HOM05D003720 ORTHO05D005312 2.9e-37 158.7 203 51.2
TAR626G1854 Trochodendron aralioides HOM05D003720 ORTHO05D005312 2.9e-37 158.7 203 50.7
Nn8g39280 Nelumbo nucifera HOM05D003720 ORTHO05D005312 3.8e-37 158.3 202 48.5
Thecc.09G115700 Theobroma cacao HOM05D003720 ORTHO05D005312 6.5e-37 157.5 203 50.7
FvH4_1g04290 Fragaria vesca HOM05D003720 ORTHO05D005312 8.5e-37 157.1 203 49.3
FAN19G2601 Fragaria x ananassa HOM05D003720 ORTHO05D005312 8.5e-37 157.1 203 49.3
FAN26G1450 Fragaria x ananassa HOM05D003720 ORTHO05D005312 8.5e-37 157.1 203 49.3
RcHm_v2.0_Chr2g0089861 Rosa chinensis HOM05D003720 ORTHO05D005312 8.5e-37 157.1 203 49.3
MD15G1181200 Malus domestica HOM05D003720 ORTHO05D005312 1.4e-36 156.4 203 50.2
Prupe.7G234400 Prunus persica HOM05D003720 ORTHO05D005312 1.4e-36 156.4 203 50.2
Haze_25676 Corylus avellana HOM05D003720 ORTHO05D005312 1.9e-36 156.0 203 48.3
PSO170G5328 Papaver somniferum HOM05D003720 ORTHO05D005312 1.9e-36 156.0 203 49.3
FAN28G0537 Fragaria x ananassa HOM05D003720 ORTHO05D005312 2.5e-36 155.6 203 48.8
Aqoxy7G01852 Aquilegia oxysepala HOM05D003720 ORTHO05D005312 3.2e-36 155.2 203 49.3
Lalb_Chr13g0302281 Lupinus albus HOM05D003720 ORTHO05D005312 3.2e-36 155.2 202 50.0
Eucgr.C04138 Eucalyptus grandis HOM05D003720 ORTHO05D005312 4.2e-36 154.8 203 49.8
Gohir.A06G060200 Gossypium hirsutum HOM05D003720 ORTHO05D005312 4.2e-36 154.8 203 50.2
Gohir.D06G058501 Gossypium hirsutum HOM05D003720 ORTHO05D005312 4.2e-36 154.8 203 50.2
Gorai.010G068600 Gossypium raimondii HOM05D003720 ORTHO05D005312 4.2e-36 154.8 203 50.2
PSO357G0216 Papaver somniferum HOM05D003720 ORTHO05D005312 4.2e-36 154.8 203 49.3
PGR102G1985 Punica granatum HOM05D003720 ORTHO05D005312 4.2e-36 154.8 203 49.3
FAN23G2146 Fragaria x ananassa HOM05D003720 ORTHO05D005312 5.5e-36 154.5 203 48.8
MELO3C025310.2 Cucumis melo HOM05D003720 ORTHO05D005312 7.2e-36 154.1 203 49.8
CsaV3_1G030910 Cucumis sativus L. HOM05D003720 ORTHO05D005312 7.2e-36 154.1 203 49.8
Dinv36598 Davidia involucrata HOM05D003720 ORTHO05D005312 7.2e-36 154.1 203 49.8
ClCG06G010450 Citrullus lanatus HOM05D003720 ORTHO05D005312 9.4e-36 153.7 203 48.8
Ciclev10007224m.g Citrus clementina HOM05D003720 ORTHO05D005312 9.4e-36 153.7 203 49.8
CSS0011692 Camellia sinensis var. sinensis HOM05D003720 ORTHO05D005312 1.2e-35 153.3 203 49.3
CSS0041174 Camellia sinensis var. sinensis HOM05D003720 ORTHO05D005312 1.2e-35 153.3 203 49.3
Sed0024242 Sechium edule HOM05D003720 ORTHO05D005312 1.2e-35 153.3 203 49.3
MSTRG.6069 Avicennia marina HOM05D003720 ORTHO05D005312 2.1e-35 152.5 203 48.3
CANSAT56G4488 Cannabis sativa HOM05D003720 ORTHO05D005312 2.7e-35 152.1 205 47.8
Cfa003295 Carpinus fangiana HOM05D003720 ORTHO05D005312 2.7e-35 152.1 203 49.3
Migut.J01184 Erythranthe guttata HOM05D003720 ORTHO05D005312 3.6e-35 151.8 203 48.3
Hund12707 Selenicereus undatus HOM05D003720 ORTHO05D005312 4.7e-35 151.4 203 49.3
Cpa.g.sc23.154 Carica papaya HOM05D003720 ORTHO05D005312 6.1e-35 151.0 203 49.3
Cc06_g09260 Coffea canephora HOM05D003720 ORTHO05D005312 7.9e-35 150.6 203 46.8
MD02G1042600 Malus domestica HOM05D003720 ORTHO05D005312 7.9e-35 150.6 203 48.8
Manes.03G068200 Manihot esculenta HOM05D003720 ORTHO05D005312 7.9e-35 150.6 203 48.8
TAR383G0813 Trochodendron aralioides HOM05D003720 ORTHO05D005312 7.9e-35 150.6 203 47.8
Gohir.D05G022400 Gossypium hirsutum HOM05D003720 ORTHO05D005312 1.0e-34 150.2 203 49.8
Gorai.009G022700 Gossypium raimondii HOM05D003720 ORTHO05D005312 1.0e-34 150.2 203 49.8
THA.LOC104809021 Tarenaya hassleriana HOM05D003720 ORTHO05D005312 1.0e-34 150.2 203 48.3
EL10Ac8g19346 Beta vulgaris HOM05D003720 ORTHO05D005312 1.8e-34 149.4 203 49.3
SalBow6G2056 Salvia bowleyana HOM05D003720 ORTHO05D005312 1.8e-34 149.4 203 47.3
Gohir.A05G021000 Gossypium hirsutum HOM05D003720 ORTHO05D005312 3.0e-34 148.7 203 49.8
Lj7C641G5 Lonicera japonica HOM05D003720 ORTHO05D005312 3.0e-34 148.7 203 47.8
Potri.018G072600 Populus trichocarpa HOM05D003720 ORTHO05D005312 3.0e-34 148.7 203 49.3
Rhsim03G0245400 Rhododendron simsii HOM05D003720 ORTHO05D005312 3.0e-34 148.7 203 46.8
Sabra18G0064000 Salix brachista HOM05D003720 ORTHO05D005312 3.0e-34 148.7 203 49.3
vmacro06189 Vaccinium macrocarpon HOM05D003720 ORTHO05D005312 3.0e-34 148.7 203 47.8
Oeu002223.1 Olea europaea HOM05D003720 ORTHO05D005312 3.9e-34 148.3 203 46.8
Atru.chr7.1286 Acer truncatum HOM05D003720 ORTHO05D005312 5.1e-34 147.9 203 48.3
Peaxi162Scf00256g00817 Petunia axillaris HOM05D003720 ORTHO05D005312 5.1e-34 147.9 203 47.8
SGA_v2.0_scaffold45G17079 Striga asiatica HOM05D003720 ORTHO05D005312 5.1e-34 147.9 203 46.3
Actinidia07451 Actinidia chinensis HOM05D003720 ORTHO05D005312 6.7e-34 147.5 203 47.8
Sopen08g011820 Solanum pennellii HOM05D003720 ORTHO05D005312 6.7e-34 147.5 203 47.8
TWI63G0927 Tripterygium wilfordii HOM05D003720 ORTHO05D005312 1.1e-33 146.7 203 46.8
Manes.16G064500 Manihot esculenta HOM05D003720 ORTHO05D005312 1.5e-33 146.4 203 47.8
Nitab4.5_0000100g0300 Nicotiana tabacum HOM05D003720 ORTHO05D005312 1.5e-33 146.4 203 47.3
PGSC0003DMG400013949 Solanum tuberosum HOM05D003720 ORTHO05D005312 1.5e-33 146.4 203 46.3
CAN.G368.4 Capsicum annuum HOM05D003720 ORTHO05D005312 3.3e-33 145.2 203 46.3
AUR62027382 Chenopodium quinoa HOM05D003720 ORTHO05D005312 3.3e-33 145.2 203 46.8
Sc08g0004790 Simmondsia chinensis HOM05D003720 ORTHO05D005312 3.3e-33 145.2 203 48.3
unitig_22.g6632 Utricularia gibba HOM05D003720 ORTHO05D005312 3.3e-33 145.2 203 46.8
Zm00001eb390320 Zea mays HOM05D003720 ORTHO05D005312 4.4e-33 144.8 203 47.8
AUR62031297 Chenopodium quinoa HOM05D003720 ORTHO05D005312 7.4e-33 144.1 203 45.8
ECA234G2971 Erigeron canadensis HOM05D003720 ORTHO05D005312 1.3e-32 143.3 203 46.3
Lsat_1_v5_gn_5_99761 Lactuca sativa HOM05D003720 ORTHO05D005312 2.2e-32 142.5 203 47.8
SEGI_35777 Sequoiadendron giganteum HOM05D003720 ORTHO05D005312 2.2e-32 142.5 203 47.3
Dinv41570 Davidia involucrata HOM05D003720 ORTHO05D005312 3.7e-32 141.7 203 47.3
Nitab4.5_0002116g0040 Nicotiana tabacum HOM05D003720 ORTHO05D005312 6.3e-32 141.0 203 46.8
DCAR_028737 Daucus carota HOM05D003720 ORTHO05D005312 1.1e-31 140.2 203 45.8
ATR0561G176 Amborella trichopoda HOM05D003720 ORTHO05D005312 2.4e-31 139.0 203 46.8
BcaC02g10846 Brassica carinata HOM05D003720 ORTHO05D005312 3.1e-31 138.7 203 46.8
C04p24570 Brassica napus HOM05D003720 ORTHO05D005312 3.1e-31 138.7 203 46.8
BolC4t23961H Brassica oleracea HOM05D003720 ORTHO05D005312 3.1e-31 138.7 203 46.8
BraA07t29508Z Brassica rapa HOM05D003720 ORTHO05D005312 3.1e-31 138.7 203 46.8
Aa31LG5G8890 Aethionema arabicum HOM05D003720 ORTHO05D005312 9.1e-31 137.1 203 46.8
A07p17900 Brassica napus HOM05D003720 ORTHO05D005312 9.1e-31 137.1 203 46.3
AT2G26890 Arabidopsis thaliana HOM05D003720 ORTHO05D005312 1.2e-30 136.7 203 46.3
SMO358G0126 Selaginella moellendorffii HOM05D003720 ORTHO05D005312 1.2e-30 136.7 203 44.8
Thhalv10001876m.g Eutrema salsugineum HOM05D003720 ORTHO05D005312 1.6e-30 136.3 203 45.8
CARHR119040 Cardamine hirsuta HOM05D003720 ORTHO05D005312 3.5e-30 135.2 203 46.8
Carub.0004s0739 Capsella rubella HOM05D003720 ORTHO05D005312 4.5e-30 134.8 203 47.3
AL4G20110 Arabidopsis lyrata HOM05D003720 ORTHO05D005312 7.7e-30 134.0 203 46.8
Mapoly0043s0138 Marchantia polymorpha HOM05D003720 ORTHO05D005312 1.3e-29 133.3 200 44.0
HanXRQChr10g0317421 Helianthus annuus HOM05D003720 ORTHO05D005312 5.0e-29 131.3 203 43.3
Pp3c13_3460 Physcomitrium patens HOM05D003720 ORTHO05D005312 1.6e-27 126.3 202 42.1
AagrBONN_evm.TU.Sc2ySwM_368.1081 Anthoceros agrestis HOM05D003720 ORTHO05D005312 4.7e-27 124.8 203 40.9
Pp3c4_24650 Physcomitrium patens HOM05D003720 ORTHO05D005312 1.1e-25 120.2 202 40.6
CBR_g4479 Chara braunii HOM05D003720 ORTHO05D005312 3.3e-25 118.6 203 37.4
SHI03186 Sapria himalayana HOM05D003720 ORTHO05D005312 7.0e-23 110.9 195 41.5
HPP92_014850 Vanilla planifolia HOM05D003720 ORTHO05D005312 5.4e-15 84.7 47 83.0
CDE07G1715 Ceratophyllum demersum HOM05D003720 ORTHO05D005312 1.9e-12 76.3 49 81.6
FvH4_1g04984 Fragaria vesca HOM05D003720 ORTHO05D005312 1.6e-11 73.2 63 58.7
vmacro05353 Vaccinium macrocarpon HOM05D004975 ORTHO05D005963 5.2e-10 68.2 50 66.0


User provided reference genes

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