Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.78M82M Arachis hypogaea HOM05D007678 ORTHO05D009658 3.1e-75 285.0 141 100.0
arahy.Tifrunner.gnm1.ann1.EB95VJ Arachis hypogaea HOM05D007678 ORTHO05D009658 1.6e-39 166.4 103 82.5
arahy.Tifrunner.gnm1.ann1.1DGF2A Arachis hypogaea HOM05D007678 ORTHO05D009658 5.7e-37 157.9 89 86.5
arahy.Tifrunner.gnm1.ann1.6E2HM0 Arachis hypogaea HOM05D007678 ORTHO05D009658 2.5e-29 132.5 74 90.5
arahy.Tifrunner.gnm1.ann1.L3S1G4 Arachis hypogaea HOM05D007678 ORTHO05D009658 3.7e-28 128.6 76 82.9
Glyma.18G256300 Glycine max HOM05D007678 ORTHO05D009658 4.4e-21 105.1 93 59.1
Lj1g0010481 Lotus japonicus HOM05D007678 ORTHO05D009658 1.8e-19 99.8 64 78.1
Glyma.09G240200 Glycine max HOM05D007678 ORTHO05D009658 5.3e-19 98.2 66 74.2
Psat3g196520 Pisum sativum HOM05D007678 ORTHO05D009658 9.1e-19 97.4 64 73.4
Lalb_Chr17g0337231 Lupinus albus HOM05D007678 ORTHO05D009658 7.7e-18 94.4 64 71.9
Medtr7g009670 Medicago truncatula HOM05D007678 ORTHO05D009658 1.0e-17 94.0 64 71.9
Ca_04109_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 1.7e-17 93.2 64 73.4
Ca_04118_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 1.7e-17 93.2 64 73.4
VMungo1383G0210 Vigna mungo HOM05D000430 ORTHO05D009658 1.7e-17 93.2 66 72.7
Haze_02966 Corylus avellana HOM05D007678 ORTHO05D009658 2.2e-17 92.8 64 71.9
QL04p021923 Quercus lobata HOM05D007678 ORTHO05D009658 8.5e-17 90.9 64 73.4
QL04p021970 Quercus lobata HOM05D007678 ORTHO05D009658 8.5e-17 90.9 69 68.1
Duzib106G1843 Durio zibethinus HOM05D007678 ORTHO05D009658 7.2e-16 87.8 66 68.2
QL04p022035 Quercus lobata HOM05D007678 ORTHO05D009658 9.4e-16 87.4 67 67.2
CiPaw.14G011000 Carya illinoinensis HOM05D007678 ORTHO05D009658 1.2e-15 87.0 70 64.3
COL.COLO4_04659 Corchorus olitorius HOM05D007678 ORTHO05D009658 1.2e-15 87.0 64 68.8
Atru.chr2.1713_Atru.chr2.1714 Acer truncatum HOM05D007678 ORTHO05D009658 1.6e-15 86.7 66 66.7
Actinidia01693 Actinidia chinensis HOM05D007678 ORTHO05D009658 2.7e-15 85.9 64 70.3
FAN06G1516 Fragaria x ananassa HOM05D007678 ORTHO05D009658 2.7e-15 85.9 78 61.5
Rhsim01G0121700 Rhododendron simsii HOM05D007678 ORTHO05D009658 6.1e-15 84.7 66 66.7
CSS0047660 Camellia sinensis var. sinensis HOM05D007678 ORTHO05D009658 7.9e-15 84.3 79 57.0
Cpa.g.sc33.162 Carica papaya HOM05D007678 ORTHO05D009658 7.9e-15 84.3 64 73.4
Thecc.10G137600 Theobroma cacao HOM05D007678 ORTHO05D009658 7.9e-15 84.3 66 65.2
RcHm_v2.0_Chr1g0328821 Rosa chinensis HOM05D007678 ORTHO05D009658 1.0e-14 84.0 64 67.2
Prupe.2G048500 Prunus persica HOM05D007678 ORTHO05D009658 1.8e-14 83.2 64 68.8
FAN10G0661 Fragaria x ananassa HOM05D007678 ORTHO05D009658 2.3e-14 82.8 64 67.2
FvH4_7g04260 Fragaria vesca HOM05D007678 ORTHO05D009658 3.0e-14 82.4 64 65.6
CAN.G128.118 Capsicum annuum HOM05D001269 ORTHO05D001083 6.7e-14 81.3 78 57.7
AUR62031676 Chenopodium quinoa HOM05D007678 ORTHO05D009658 6.7e-14 81.3 64 65.6
Dinv31528 Davidia involucrata HOM05D007678 ORTHO05D009658 6.7e-14 81.3 64 65.6
Eucgr.G03196 Eucalyptus grandis HOM05D007678 ORTHO05D009658 8.8e-14 80.9 64 70.3
EL10Ac2g02701 Beta vulgaris HOM05D007678 ORTHO05D009658 1.1e-13 80.5 64 62.5
MD02G1272300 Malus domestica HOM05D007678 ORTHO05D009658 1.5e-13 80.1 70 61.4
Zm00001eb303400 Zea mays HOM05D007678 ORTHO05D009658 2.0e-13 79.7 66 59.1
Solyc10g081280.2 Solanum lycopersicum HOM05D007678 ORTHO05D009658 2.6e-13 79.3 66 62.1
TAR623G0324 Trochodendron aralioides HOM05D007678 ORTHO05D009658 2.6e-13 79.3 64 62.5
DCAR_001914 Daucus carota HOM05D007678 ORTHO05D009658 3.3e-13 79.0 63 61.9
Gohir.D10G198600 Gossypium hirsutum HOM05D007678 ORTHO05D009658 3.3e-13 79.0 66 62.1
TPR.G4277 Trifolium pratense HOM05D007678 ORTHO05D009658 3.3e-13 79.0 51 72.5
Nitab4.5_0008005g0010 Nicotiana tabacum HOM05D007678 ORTHO05D009658 4.4e-13 78.6 66 62.1
Potri.001G033500 Populus trichocarpa HOM05D007678 ORTHO05D009658 4.4e-13 78.6 64 64.1
Sopen10g031780 Solanum pennellii HOM05D007678 ORTHO05D009658 4.4e-13 78.6 66 60.6
PGSC0003DMG401028118 Solanum tuberosum HOM05D007678 ORTHO05D009658 4.4e-13 78.6 66 62.1
Ah.12g064780 Amaranthus hybridus HOM05D007678 ORTHO05D009658 5.7e-13 78.2 64 62.5
CDE09G0612 Ceratophyllum demersum HOM05D007678 ORTHO05D009658 5.7e-13 78.2 64 57.8
vmacro20847 Vaccinium macrocarpon HOM05D007678 ORTHO05D009658 5.7e-13 78.2 79 57.0
Gohir.A10G190900 Gossypium hirsutum HOM05D007678 ORTHO05D009658 7.4e-13 77.8 66 60.6
Sabra01G0023800 Salix brachista HOM05D007678 ORTHO05D009658 1.3e-12 77.0 65 61.5
TWI38G1059 Tripterygium wilfordii HOM05D007678 ORTHO05D009658 1.3e-12 77.0 66 59.1
Oeu044217.3 Olea europaea HOM05D007678 ORTHO05D009658 1.7e-12 76.6 65 61.5
Gorai.011G222500 Gossypium raimondii HOM05D007678 ORTHO05D009658 2.2e-12 76.3 66 59.1
PGR031G1114 Punica granatum HOM05D007678 ORTHO05D009658 2.8e-12 75.9 64 62.5
ATR0307G037 Amborella trichopoda HOM05D007678 ORTHO05D009658 3.7e-12 75.5 63 60.3
Peaxi162Scf00153g00057 Petunia axillaris HOM05D007678 ORTHO05D009658 6.3e-12 74.7 78 51.3
Phvul.008G043200 Phaseolus vulgaris HOM05D007678 ORTHO05D009658 6.3e-12 74.7 53 71.7
Nn7g37012 Nelumbo nucifera HOM05D007678 ORTHO05D009658 8.2e-12 74.3 64 56.2
CsaV3_5G029470 Cucumis sativus L. HOM05D007678 ORTHO05D000003 1.4e-11 73.6 64 57.8
Sed0019894 Sechium edule HOM05D000001 ORTHO05D000003 1.4e-11 73.6 64 62.5
SalBow6G2419 Salvia bowleyana HOM05D007678 ORTHO05D009658 2.4e-11 72.8 64 57.8
Cc06_g20600 Coffea canephora HOM05D007678 ORTHO05D009658 4.1e-11 72.0 64 56.2
MBI13_g30074_MAGBIO Magnolia biondii HOM05D007678 ORTHO05D009658 7.0e-11 71.2 69 55.1
HPP92_018248 Vanilla planifolia HOM05D007678 ORTHO05D009658 9.1e-11 70.9 70 48.6
MELO3C034052.2 Cucumis melo HOM05D007678 ORTHO05D009658 1.2e-10 70.5 64 56.2
Migut.J01589 Erythranthe guttata HOM05D007678 ORTHO05D009658 1.2e-10 70.5 64 57.8
HanXRQChr12g0376111 Helianthus annuus HOM05D007678 ORTHO05D009658 1.6e-10 70.1 64 60.9
Hund13420 Selenicereus undatus HOM05D007678 ORTHO05D009658 2.0e-10 69.7 72 56.9
Sc10g0003150 Simmondsia chinensis HOM05D007678 ORTHO05D009658 2.0e-10 69.7 58 58.6
ECA248G0545 Erigeron canadensis HOM05D007678 ORTHO05D009658 7.7e-10 67.8 64 57.8
unitig_37.g12769 Utricularia gibba HOM05D007678 ORTHO05D009658 5.0e-09 65.1 64 53.1
Lsat_1_v5_gn_7_114920 Lactuca sativa HOM05D007678 ORTHO05D009658 6.5e-09 64.7 65 58.5
Manes.04G155050 Manihot esculenta HOM05D007678 ORTHO05D009658 6.5e-09 64.7 98 42.9
arahy.Tifrunner.gnm1.ann1.MMNX5U Arachis hypogaea HOM05D000747 ORTHO05D009658 2.5e-08 62.8 52 71.2
CBR_g30334 Chara braunii HOM05D007678 ORTHO05D009658 9.4e-08 60.8 63 46.0
Nitab4.5_0000062g0570 Nicotiana tabacum HOM05D007678 ORTHO05D009658 1.2e-07 60.5 66 53.0
arahy.Tifrunner.gnm1.ann1.NH3ZAS Arachis hypogaea HOM05D007678 ORTHO05D009658 1.0e-06 57.4 43 65.1
Mapoly0003s0067 Marchantia polymorpha HOM05D007678 ORTHO05D009658 1.0e-06 57.4 63 46.0
MCO01G505 Micromonas commoda HOM05D007678 ORTHO05D009658 8.8e-06 54.3 64 35.9
SMO174G0167 Selaginella moellendorffii HOM05D007678 ORTHO05D009658 8.8e-06 54.3 63 42.9


User provided reference genes

Program Settings