Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.78KFMW Arachis hypogaea HOM05D006072 ORTHO05D007363 1.7e-102 375.9 184 100.0
arahy.Tifrunner.gnm1.ann1.G5ZNF6 Arachis hypogaea HOM05D006072 ORTHO05D007363 3.1e-83 312.0 150 100.0
arahy.Tifrunner.gnm1.ann1.U641A1 Arachis hypogaea HOM05D006072 ORTHO05D007363 3.1e-83 312.0 150 100.0
arahy.Tifrunner.gnm1.ann1.W4NXZ5 Arachis hypogaea HOM05D006072 ORTHO05D007363 3.1e-83 312.0 150 100.0
Ca_17713_v3 Cicer arietinum L. HOM05D006072 ORTHO05D007363 1.9e-56 223.0 188 66.0
Medtr8g091400 Medicago truncatula HOM05D006072 ORTHO05D007363 3.0e-54 215.7 187 64.7
Medtr8g092370 Medicago truncatula HOM05D006072 ORTHO05D007363 5.1e-54 214.9 187 64.7
Medtr8g092700 Medicago truncatula HOM05D006072 ORTHO05D007363 5.1e-54 214.9 187 64.7
Lj4g0019082 Lotus japonicus HOM05D006072 ORTHO05D007363 1.5e-53 213.4 189 63.5
Psat7g053120 Pisum sativum HOM05D006072 ORTHO05D007363 2.1e-52 209.5 189 62.4
Phvul.002G262300 Phaseolus vulgaris HOM05D006072 ORTHO05D007363 2.8e-52 209.1 190 62.6
Medtr4g075230 Medicago truncatula HOM05D006072 ORTHO05D007363 1.1e-51 207.2 187 62.6
TPR.G2161 Trifolium pratense HOM05D006072 ORTHO05D007363 1.4e-51 206.8 189 61.9
VMungo0251G2066 Vigna mungo HOM05D006072 ORTHO05D007363 1.8e-51 206.5 190 62.1
Glyma.05G181300 Glycine max HOM05D006072 ORTHO05D007363 2.4e-51 206.1 192 62.5
Lalb_Chr07g0184981 Lupinus albus HOM05D006072 ORTHO05D007363 5.8e-50 201.4 189 60.8
Glyma.08G139000 Glycine max HOM05D006072 ORTHO05D007363 1.2e-47 193.7 194 60.8
CiPaw.03G138500 Carya illinoinensis HOM05D006072 ORTHO05D007363 1.0e-46 190.7 187 59.4
Haze_24990 Corylus avellana HOM05D006072 ORTHO05D007363 2.3e-46 189.5 186 59.1
Lalb_Chr12g0203671 Lupinus albus HOM05D006072 ORTHO05D007363 3.9e-46 188.7 188 58.0
Atru.chr4.239 Acer truncatum HOM05D006072 ORTHO05D007363 7.4e-45 184.5 186 57.5
Cfa002714 Carpinus fangiana HOM05D006072 ORTHO05D007363 1.3e-44 183.7 186 55.9
QL06p050421 Quercus lobata HOM05D006072 ORTHO05D007363 4.8e-44 181.8 189 58.7
Ciclev10025690m.g Citrus clementina HOM05D006072 ORTHO05D007363 3.4e-42 175.6 186 53.2
Duzib187G0709 Durio zibethinus HOM05D006072 ORTHO05D007363 5.8e-42 174.9 195 50.8
Duzib147G1157 Durio zibethinus HOM05D006072 ORTHO05D007363 3.8e-41 172.2 186 52.2
DCAR_023269 Daucus carota HOM05D006072 ORTHO05D007363 4.9e-41 171.8 185 54.1
Sabra07G0072700 Salix brachista HOM05D006072 ORTHO05D007363 1.1e-40 170.6 191 55.0
Potri.005G079500 Populus trichocarpa HOM05D006072 ORTHO05D007363 2.5e-40 169.5 194 53.6
Manes.12G138600 Manihot esculenta HOM05D006072 ORTHO05D007363 3.2e-40 169.1 187 50.8
Nn3g18504 Nelumbo nucifera HOM05D006072 ORTHO05D007363 5.5e-40 168.3 189 51.9
Thecc.01G107000 Theobroma cacao HOM05D006072 ORTHO05D007363 5.5e-40 168.3 194 49.5
Lsat_1_v5_gn_3_92501 Lactuca sativa HOM05D006072 ORTHO05D007363 9.3e-40 167.5 186 52.2
TAR629G3443 Trochodendron aralioides HOM05D006072 ORTHO05D007363 2.7e-39 166.0 185 53.0
ECA246G2885 Erigeron canadensis HOM05D006072 ORTHO05D007363 6.0e-39 164.9 195 50.3
Ca_20317_v3 Cicer arietinum L. HOM05D006072 ORTHO05D007363 2.3e-38 162.9 186 56.5
Gorai.007G241900 Gossypium raimondii HOM05D006072 ORTHO05D007363 6.7e-38 161.4 186 50.0
Gohir.A11G199500 Gossypium hirsutum HOM05D006072 ORTHO05D007363 1.1e-37 160.6 186 49.5
Gohir.D11G224600 Gossypium hirsutum HOM05D006072 ORTHO05D007363 1.1e-37 160.6 186 50.0
Cpa.g.sc131.23 Carica papaya HOM05D006072 ORTHO05D007363 1.3e-36 157.1 184 51.6
CANSAT01G0770 Cannabis sativa HOM05D006072 ORTHO05D007363 4.8e-36 155.2 196 48.0
TAR622G0191 Trochodendron aralioides HOM05D006072 ORTHO05D007363 1.4e-35 153.7 186 51.1
Gorai.008G103500 Gossypium raimondii HOM05D006072 ORTHO05D007363 1.8e-35 153.3 186 48.4
Gohir.A12G093200 Gossypium hirsutum HOM05D006072 ORTHO05D007363 2.4e-35 152.9 186 47.8
Gohir.D12G095100 Gossypium hirsutum HOM05D006072 ORTHO05D007363 1.2e-34 150.6 186 47.3
GSVIVG01011570001 Vitis vinifera HOM05D006072 ORTHO05D007363 2.0e-34 149.8 184 47.3
Eucgr.H00590 Eucalyptus grandis HOM05D006072 ORTHO05D007363 1.7e-33 146.7 189 47.1
Medtr0082s0140 Medicago truncatula HOM05D006072 ORTHO05D007363 3.2e-32 142.5 87 86.2
PGR083G2817 Punica granatum HOM05D006072 ORTHO05D007363 4.2e-32 142.1 183 44.8
GSVIVG01011560001 Vitis vinifera HOM05D006072 ORTHO05D007363 2.7e-31 139.4 184 46.2
GSVIVG01011561001 Vitis vinifera HOM05D006072 ORTHO05D007363 3.9e-30 135.6 185 43.8
Sc18g0004880 Simmondsia chinensis HOM05D006072 ORTHO05D007363 1.1e-29 134.0 185 44.3
AUR62002207 Chenopodium quinoa HOM05D006072 ORTHO05D007363 9.7e-29 131.0 185 44.3
Nitab4.5_0000876g0020 Nicotiana tabacum HOM05D006072 ORTHO05D007363 1.3e-28 130.6 190 42.6
AUR62015493 Chenopodium quinoa HOM05D006072 ORTHO05D007363 1.6e-28 130.2 185 44.3
MBI19_g02922_MAGBIO Magnolia biondii HOM05D006072 ORTHO05D007363 1.6e-28 130.2 184 42.9
EL10Ac1g00741 Beta vulgaris HOM05D006072 ORTHO05D007363 8.2e-28 127.9 185 42.7
AUR62003481 Chenopodium quinoa HOM05D006072 ORTHO05D007363 8.2e-28 127.9 185 41.1
Dinv16779 Davidia involucrata HOM05D006072 ORTHO05D007363 1.8e-27 126.7 189 43.4
Dinv07032 Davidia involucrata HOM05D006072 ORTHO05D007363 6.9e-27 124.8 188 43.6
Ah.09g224330 Amaranthus hybridus HOM05D006072 ORTHO05D007363 1.2e-26 124.0 185 38.4
Ah.14g079240 Amaranthus hybridus HOM05D006072 ORTHO05D007363 1.2e-26 124.0 184 39.1
Hma1.2p1_0523F.1_g172190 Hydrangea macrophylla HOM05D006072 ORTHO05D007363 1.2e-26 124.0 189 42.9
Ah.14g079100 Amaranthus hybridus HOM05D006072 ORTHO05D007363 7.7e-26 121.3 186 39.2
Peaxi162Scf00003g00145 Petunia axillaris HOM05D006072 ORTHO05D007363 1.3e-25 120.6 195 40.0
CAN.G1.46 Capsicum annuum HOM05D006072 ORTHO05D007363 2.2e-25 119.8 190 40.5
Nitab4.5_0006309g0060 Nicotiana tabacum HOM05D006072 ORTHO05D007363 2.2e-25 119.8 187 41.2
Sopen10g022790 Solanum pennellii HOM05D006072 ORTHO05D007363 2.2e-25 119.8 190 39.5
SGA_v2.0_scaffold55G19813 Striga asiatica HOM05D006072 ORTHO05D007363 2.2e-25 119.8 190 40.0
Oeu007228.1 Olea europaea HOM05D006072 ORTHO05D007363 6.5e-25 118.2 191 41.4
Solyc10g051090.3 Solanum lycopersicum HOM05D006072 ORTHO05D007363 6.5e-25 118.2 190 38.9
Actinidia24189 Actinidia chinensis HOM05D006072 ORTHO05D007363 1.4e-24 117.1 185 40.0
Nitab4.5_0004318g0070 Nicotiana tabacum HOM05D006072 ORTHO05D007363 3.2e-24 115.9 187 39.6
Lsat_1_v5_gn_5_36701 Lactuca sativa HOM05D006072 ORTHO05D007363 5.5e-24 115.2 185 40.0
Migut.N01215 Erythranthe guttata HOM05D006072 ORTHO05D007363 7.2e-24 114.8 187 38.5
Oeu025733.1 Olea europaea HOM05D006072 ORTHO05D007363 9.4e-24 114.4 190 40.5
Dinv12556 Davidia involucrata HOM05D006072 ORTHO05D007363 1.2e-23 114.0 119 51.3
ATR0598G256 Amborella trichopoda HOM05D006072 ORTHO05D007363 7.9e-23 111.3 197 40.6
Peaxi162Scf00003g00149 Petunia axillaris HOM05D006072 ORTHO05D007363 7.9e-23 111.3 199 37.7
Rhsim09G0083300 Rhododendron simsii HOM05D006072 ORTHO05D007363 3.9e-22 109.0 189 38.6
AUR62017790 Chenopodium quinoa HOM05D006072 ORTHO05D007363 1.1e-21 107.5 166 38.6
Peaxi162Scf00641g00039 Petunia axillaris HOM05D006072 ORTHO05D007363 1.1e-21 107.5 186 36.0
Sopen09g027060 Solanum pennellii HOM05D006072 ORTHO05D007363 1.5e-21 107.1 187 39.0
CSS0004323 Camellia sinensis var. sinensis HOM05D006072 ORTHO05D007363 2.0e-21 106.7 120 46.7
CSS0011017 Camellia sinensis var. sinensis HOM05D006072 ORTHO05D007363 2.0e-21 106.7 182 40.7
SalBow3G0772 Salvia bowleyana HOM05D006072 ORTHO05D007363 2.0e-21 106.7 190 37.4
Rhsim09G0083400 Rhododendron simsii HOM05D006072 ORTHO05D007363 3.3e-21 105.9 182 36.8
Cc02_g18000 Coffea canephora HOM05D006072 ORTHO05D007363 4.3e-21 105.5 185 38.4
Cc01_g19360 Coffea canephora HOM05D006072 ORTHO05D007363 5.7e-21 105.1 192 36.5
HPP92_004203 Vanilla planifolia HOM05D006072 ORTHO05D007363 5.7e-21 105.1 146 44.5
Rhsim13G0107200 Rhododendron simsii HOM05D006072 ORTHO05D007363 7.4e-21 104.8 188 37.8
PGSC0003DMG400019330 Solanum tuberosum HOM05D006072 ORTHO05D007363 2.8e-20 102.8 187 37.4
SalBow4G0595 Salvia bowleyana HOM05D006072 ORTHO05D007363 4.8e-20 102.1 200 35.0
CAN.G3.7 Capsicum annuum HOM05D006072 ORTHO05D007363 6.3e-20 101.7 188 36.2
ATR0598G294 Amborella trichopoda HOM05D006072 ORTHO05D007363 8.2e-20 101.3 138 46.4
Migut.D00310 Erythranthe guttata HOM05D006072 ORTHO05D007363 1.4e-19 100.5 183 37.7
PGR083G1472 Punica granatum HOM05D006072 ORTHO05D007363 9.1e-19 97.8 184 34.8
Lsat_1_v5_gn_1_2900 Lactuca sativa HOM05D006072 ORTHO05D007363 7.7e-18 94.7 95 61.1
ATR0598G193 Amborella trichopoda HOM05D006072 ORTHO05D007363 1.7e-17 93.6 135 44.4
Phvul.011G140200 Phaseolus vulgaris HOM05D006072 ORTHO05D007363 3.8e-17 92.4 82 64.6
Solyc09g065320.3 Solanum lycopersicum HOM05D006072 ORTHO05D007363 8.5e-17 91.3 119 42.9
Actinidia12426 Actinidia chinensis HOM05D006072 ORTHO05D007363 4.2e-16 89.0 150 38.0
ATR0598G249 Amborella trichopoda HOM05D006072 ORTHO05D007363 1.2e-15 87.4 137 41.6
Peaxi162Scf00003g01433 Petunia axillaris HOM05D005785 ORTHO05D007962 2.7e-15 86.3 102 52.0
Actinidia07224 Actinidia chinensis HOM05D006072 ORTHO05D007363 3.0e-14 82.8 105 49.5
Ca_22792_v3 Cicer arietinum L. HOM05D006072 ORTHO05D007363 5.1e-14 82.0 61 75.4
Rhsim09G0083000 Rhododendron simsii HOM05D006072 ORTHO05D007363 8.8e-14 81.3 137 38.0
Os02g0491300 Oryza sativa ssp. japonica HOM05D006072 ORTHO05D007363 1.5e-13 80.5 143 37.8
SGA_v2.0_scaffold138G35329 Striga asiatica HOM05D000358 ORTHO05D007363 1.7e-12 77.0 184 34.2
Dinv20308 Davidia involucrata HOM05D006072 ORTHO05D007363 4.1e-11 72.4 93 47.3
Hma1.2p1_0281F.1_g113250 Hydrangea macrophylla HOM05D006072 ORTHO05D007363 2.2e-09 66.6 115 38.3
Lsat_1_v5_gn_1_2880 Lactuca sativa HOM05D006072 ORTHO05D007363 6.5e-09 65.1 37 83.8
Lalb_Chr11g0064561 Lupinus albus HOM05D006072 ORTHO05D007363 6.7e-06 55.1 45 66.7
Dinv07189 Davidia involucrata HOM05D006072 ORTHO05D007363 8.8e-06 54.7 48 50.0


User provided reference genes

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