Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.6D7HHK Arachis hypogaea HOM05D006161 ORTHO05D007483 1.3e-71 273.1 154 100.0
arahy.Tifrunner.gnm1.ann1.75PVJ4 Arachis hypogaea HOM05D006161 ORTHO05D007483 1.3e-71 273.1 154 100.0
Lalb_Chr10g0097811 Lupinus albus HOM05D006161 ORTHO05D007483 7.2e-62 240.7 153 86.3
PGR142G0837 Punica granatum HOM05D006161 ORTHO05D007483 2.3e-60 235.7 150 88.7
MD05G1163200 Malus domestica HOM05D006161 ORTHO05D007483 3.0e-60 235.3 153 87.6
Prupe.8G061800 Prunus persica HOM05D006161 ORTHO05D007483 6.8e-60 234.2 151 87.4
MD10G1152800 Malus domestica HOM05D006161 ORTHO05D007483 2.6e-59 232.3 151 86.8
Eucgr.I02667 Eucalyptus grandis HOM05D006161 ORTHO05D007483 3.4e-59 231.9 152 86.2
MD05G1163000 Malus domestica HOM05D006161 ORTHO05D007483 1.3e-58 229.9 153 86.3
GSVIVG01003100001 Vitis vinifera HOM05D006161 ORTHO05D007483 2.9e-58 228.8 152 84.9
Manes.14G166201 Manihot esculenta HOM05D006161 ORTHO05D007483 1.8e-57 226.1 149 85.2
RcHm_v2.0_Chr3g0485521 Rosa chinensis HOM05D006161 ORTHO05D007483 2.4e-57 225.7 148 87.2
TWI14G1433 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 2.4e-57 225.7 149 85.2
Atru.chr12.1730 Acer truncatum HOM05D006161 ORTHO05D007483 9.2e-57 223.8 149 83.9
Psat7g098400 Pisum sativum HOM05D006161 ORTHO05D007483 1.6e-56 223.0 146 84.9
FvH4_1g26050 Fragaria vesca HOM05D006161 ORTHO05D007483 2.0e-56 222.6 149 85.2
FAN26G2610 Fragaria x ananassa HOM05D006161 ORTHO05D007483 2.0e-56 222.6 149 85.2
Oeu047362.1 Olea europaea HOM05D006161 ORTHO05D007483 2.7e-56 222.2 150 82.7
Ciclev10029442m.g Citrus clementina HOM05D006161 ORTHO05D007483 3.5e-56 221.9 149 83.2
MD00G1096800 Malus domestica HOM05D006161 ORTHO05D007483 3.5e-56 221.9 154 85.1
Rhsim05G0107700 Rhododendron simsii HOM05D006161 ORTHO05D007483 3.5e-56 221.9 150 83.3
FAN28G0148 Fragaria x ananassa HOM05D006161 ORTHO05D007483 4.6e-56 221.5 149 84.6
Potri.012G022200 Populus trichocarpa HOM05D006161 ORTHO05D007483 4.6e-56 221.5 148 83.8
VMungo0251G3203 Vigna mungo HOM05D006161 ORTHO05D007483 4.6e-56 221.5 151 82.1
CsaV3_7G006450 Cucumis sativus L. HOM05D006161 ORTHO05D007483 5.9e-56 221.1 148 81.8
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 1.3e-55 219.9 147 82.3
MELO3C018647.2 Cucumis melo HOM05D006161 ORTHO05D007483 1.3e-55 219.9 148 81.8
Dinv09035 Davidia involucrata HOM05D006161 ORTHO05D007483 1.3e-55 219.9 146 84.2
FAN23G0154 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.3e-55 219.9 149 83.9
FAN23G2587 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.3e-55 219.9 149 83.9
Medtr4g094242 Medicago truncatula HOM05D006161 ORTHO05D007483 1.3e-55 219.9 147 83.0
Peaxi162Scf00001g00019 Petunia axillaris HOM05D006161 ORTHO05D007483 1.3e-55 219.9 155 79.4
Phvul.002G208400 Phaseolus vulgaris HOM05D006161 ORTHO05D007483 2.3e-55 219.2 151 81.5
FAN19G1889 Fragaria x ananassa HOM05D006161 ORTHO05D007483 2.9e-55 218.8 149 83.9
CSS0044873 Camellia sinensis var. sinensis HOM05D006161 ORTHO05D007483 5.0e-55 218.0 149 81.9
Nitab4.5_0003858g0050 Nicotiana tabacum HOM05D006161 ORTHO05D007483 6.6e-55 217.6 153 80.4
Glyma.05G117900 Glycine max HOM05D006161 ORTHO05D007483 1.1e-54 216.9 154 77.9
Glyma.08G072800 Glycine max HOM05D006161 ORTHO05D007483 1.5e-54 216.5 154 78.6
Nitab4.5_0002576g0040 Nicotiana tabacum HOM05D006161 ORTHO05D007483 1.5e-54 216.5 153 79.1
Hund06386 Selenicereus undatus HOM05D006161 ORTHO05D007483 1.5e-54 216.5 150 80.7
THA.LOC104799966 Tarenaya hassleriana HOM05D006161 ORTHO05D007483 1.5e-54 216.5 146 80.8
Sed0024565 Sechium edule HOM05D006161 ORTHO05D007483 1.9e-54 216.1 148 80.4
CANSAT11G1086 Cannabis sativa HOM05D006161 ORTHO05D007483 4.3e-54 214.9 148 79.7
Sc18g0006920 Simmondsia chinensis HOM05D006161 ORTHO05D007483 5.6e-54 214.5 150 80.0
PGSC0003DMG400012586 Solanum tuberosum HOM05D006161 ORTHO05D007483 7.3e-54 214.2 153 79.7
vmacro19927 Vaccinium macrocarpon HOM05D006161 ORTHO05D007483 7.3e-54 214.2 149 81.9
CAN.G523.74 Capsicum annuum HOM05D006161 ORTHO05D007483 9.5e-54 213.8 154 77.9
Sopen01g047660 Solanum pennellii HOM05D006161 ORTHO05D007483 1.2e-53 213.4 153 79.1
Sabra15G0004000 Salix brachista HOM05D006161 ORTHO05D007483 2.1e-53 212.6 164 75.6
Aqoxy3G03670 Aquilegia oxysepala HOM05D006161 ORTHO05D007483 2.8e-53 212.2 149 79.9
Solyc01g105130.4 Solanum lycopersicum HOM05D006161 ORTHO05D007483 3.6e-53 211.8 153 78.4
EL10Ac9g21470 Beta vulgaris HOM05D006161 ORTHO05D007483 4.7e-53 211.5 148 81.1
Cfa005604 Carpinus fangiana HOM05D006161 ORTHO05D007483 6.1e-53 211.1 153 80.4
Lsat_1_v5_gn_5_107281 Lactuca sativa HOM05D006161 ORTHO05D007483 6.1e-53 211.1 146 78.1
BcaB02g09779 Brassica carinata HOM05D006161 ORTHO05D007483 1.8e-52 209.5 152 76.3
C03p62070 Brassica napus HOM05D006161 ORTHO05D007483 1.8e-52 209.5 152 75.7
BolC3t18468H Brassica oleracea HOM05D006161 ORTHO05D007483 1.8e-52 209.5 152 76.3
Thhalv10005060m.g Eutrema salsugineum HOM05D006161 ORTHO05D007483 1.8e-52 209.5 152 76.3
SalBow6G1080 Salvia bowleyana HOM05D006161 ORTHO05D007483 2.3e-52 209.1 146 77.4
SalBow6G1732 Salvia bowleyana HOM05D006161 ORTHO05D007483 2.3e-52 209.1 146 77.4
AL8G41450 Arabidopsis lyrata HOM05D006161 ORTHO05D007483 4.0e-52 208.4 148 76.4
AUR62013116 Chenopodium quinoa HOM05D006161 ORTHO05D007483 4.0e-52 208.4 151 78.1
AT5G64180 Arabidopsis thaliana HOM05D006161 ORTHO05D007483 6.8e-52 207.6 148 75.7
MSTRG.20298 Avicennia marina HOM05D006161 ORTHO05D007483 6.8e-52 207.6 149 75.2
Aa31LG1G17750 Aethionema arabicum HOM05D006161 ORTHO05D007483 8.9e-52 207.2 146 78.1
BraA09t36505Z Brassica rapa HOM05D006161 ORTHO05D007483 8.9e-52 207.2 152 75.0
SGA_v2.0_scaffold14G07119 Striga asiatica HOM05D006161 ORTHO05D007483 8.9e-52 207.2 150 75.3
A09p08560 Brassica napus HOM05D006161 ORTHO05D007483 1.2e-51 206.8 152 75.0
HanXRQChr10g0295861 Helianthus annuus HOM05D006161 ORTHO05D007483 1.2e-51 206.8 150 76.7
Sp2g27240 Schrenkiella parvula HOM05D006161 ORTHO05D007483 1.2e-51 206.8 152 75.7
BolC9t53879H Brassica oleracea HOM05D006161 ORTHO05D007483 1.5e-51 206.5 152 75.0
PSO017G6730 Papaver somniferum HOM05D006161 ORTHO05D007483 1.5e-51 206.5 146 79.5
PSO478G0074 Papaver somniferum HOM05D006161 ORTHO05D007483 1.5e-51 206.5 146 79.5
BraA06t26029Z Brassica rapa HOM05D006161 ORTHO05D007483 2.6e-51 205.7 149 77.2
Carub.0008s2497 Capsella rubella HOM05D006161 ORTHO05D007483 3.4e-51 205.3 149 74.5
ECA234G1571 Erigeron canadensis HOM05D006161 ORTHO05D007483 3.4e-51 205.3 147 75.5
C09p09680 Brassica napus HOM05D006161 ORTHO05D007483 4.4e-51 204.9 152 74.3
CARHR278090 Cardamine hirsuta HOM05D006161 ORTHO05D007483 5.8e-51 204.5 148 75.0
Migut.B00613 Erythranthe guttata HOM05D006161 ORTHO05D007483 5.8e-51 204.5 148 78.4
TAR622G1105 Trochodendron aralioides HOM05D006161 ORTHO05D007483 7.5e-51 204.1 149 76.5
MSTRG.16580 Avicennia marina HOM05D006161 ORTHO05D007483 1.7e-50 203.0 149 75.8
BcaC01g02675 Brassica carinata HOM05D006161 ORTHO05D007483 6.4e-50 201.1 152 73.7
Lj5P240T24 Lonicera japonica HOM05D006161 ORTHO05D007483 9.2e-49 197.2 131 84.0
ATR0177G010 Amborella trichopoda HOM05D006161 ORTHO05D007483 1.6e-48 196.4 145 74.5
Lj4g0015467 Lotus japonicus HOM05D006161 ORTHO05D007483 6.0e-48 194.5 153 73.2
Os12g0502100 Oryza sativa ssp. japonica HOM05D006161 ORTHO05D007483 6.0e-48 194.5 145 73.1
CDE04G2984 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 1.3e-47 193.4 145 73.1
SHI16526 Sapria himalayana HOM05D006161 ORTHO05D007483 3.3e-46 188.7 141 73.8
ClCG09G015360 Citrullus lanatus HOM05D006161 ORTHO05D007483 4.7e-45 184.9 148 73.0
CiPaw.05G036100 Carya illinoinensis HOM05D006161 ORTHO05D007483 8.1e-45 184.1 151 72.2
Cc02_g21600 Coffea canephora HOM05D006161 ORTHO05D007483 5.8e-43 177.9 144 72.2
A06p30900 Brassica napus HOM05D006161 ORTHO05D007483 1.3e-42 176.8 152 67.1
Lj6g0024224 Lotus japonicus HOM05D006161 ORTHO05D007483 1.3e-42 176.8 154 70.1
Cpa.g.sc42.64 Carica papaya HOM05D006161 ORTHO05D007483 2.2e-42 176.0 145 71.7
QL11p020678 Quercus lobata HOM05D006161 ORTHO05D007483 4.9e-42 174.9 112 87.5
Haze_10694 Corylus avellana HOM05D006161 ORTHO05D007483 7.1e-41 171.0 111 86.5
Ca_18349_v3 Cicer arietinum L. HOM05D006161 ORTHO05D007483 2.7e-40 169.1 154 65.6
ECA236G0554 Erigeron canadensis HOM05D006161 ORTHO05D007483 3.5e-40 168.7 144 63.2
Nn4g23459 Nelumbo nucifera HOM05D006161 ORTHO05D007483 5.1e-39 164.9 149 67.1
unitig_8.g3487 Utricularia gibba HOM05D006161 ORTHO05D007483 1.2e-37 160.2 213 49.3
CDE04G3544 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 1.8e-36 156.4 142 63.4
Gohir.A12G014900 Gossypium hirsutum HOM05D006161 ORTHO05D007483 2.3e-36 156.0 150 64.0
Sabra05G0140100 Salix brachista HOM05D006161 ORTHO05D007483 2.6e-35 152.5 129 70.5
TWI14G1282 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 4.4e-35 151.8 170 59.4
Actinidia00265 Actinidia chinensis HOM05D006161 ORTHO05D007483 7.6e-35 151.0 142 64.1
Hma1.2p1_0704F.1_g206700 Hydrangea macrophylla HOM05D006161 ORTHO05D007483 9.9e-35 150.6 110 77.3
HPP92_024935 Vanilla planifolia HOM05D006161 ORTHO05D007483 6.4e-34 147.9 107 78.5
Mapoly0094s0011 Marchantia polymorpha HOM05D006161 ORTHO05D007483 3.2e-33 145.6 143 55.2
Potri.015G005600 Populus trichocarpa HOM05D006161 ORTHO05D007483 1.6e-32 143.3 150 62.0
Duzib132G0386 Durio zibethinus HOM05D006161 ORTHO05D007483 3.5e-32 142.1 150 60.0
AagrBONN_evm.TU.Sc2ySwM_117.171 Anthoceros agrestis HOM05D006161 ORTHO05D007483 7.8e-32 141.0 144 53.5
DCAR_001788 Daucus carota HOM05D006161 ORTHO05D007483 3.0e-31 139.0 106 69.8
SMO116G0092 Selaginella moellendorffii HOM05D006161 ORTHO05D007483 4.3e-30 135.2 138 51.4
SGA_v2.0_scaffold11G05811 Striga asiatica HOM05D006161 ORTHO05D007483 5.6e-30 134.8 148 56.1
Zm00001eb409430 Zea mays HOM05D006161 ORTHO05D007483 2.1e-29 132.9 118 66.1
CDE07G1624 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 3.6e-29 132.1 92 80.4
Thecc.02G139200 Theobroma cacao HOM05D006161 ORTHO05D007483 3.6e-29 132.1 148 58.8
Zm00001eb138120 Zea mays HOM05D006161 ORTHO05D007483 1.4e-28 130.2 104 71.2
Gohir.D12G015300 Gossypium hirsutum HOM05D006161 ORTHO05D007483 1.2e-27 127.1 150 55.3
Gorai.008G015400 Gossypium raimondii HOM05D006161 ORTHO05D007483 1.2e-27 127.1 150 55.3
arahy.Tifrunner.gnm1.ann1.A44469 Arachis hypogaea HOM05D006161 ORTHO05D007483 4.4e-27 125.2 81 88.9
COL.COLO4_13985 Corchorus olitorius HOM05D006161 ORTHO05D007483 1.5e-22 110.2 126 58.7
arahy.Tifrunner.gnm1.ann1.HFW61Q Arachis hypogaea HOM05D006161 ORTHO05D007483 9.0e-20 100.9 66 84.8
TPR.G10469 Trifolium pratense HOM05D006161 ORTHO05D007483 9.6e-14 80.9 52 76.9
Pp3c24_330 Physcomitrium patens HOM05D006161 ORTHO05D007483 5.3e-12 75.1 141 38.3
VMungo0540G0821 Vigna mungo HOM05D006161 ORTHO05D007483 2.2e-10 69.7 44 79.5
Actinidia23993 Actinidia chinensis HOM05D006161 ORTHO05D007483 2.4e-09 66.2 128 39.8
SalBow1G1176 Salvia bowleyana HOM05D007970 ORTHO05D009943 3.2e-09 65.9 44 75.0
CBR_g70737 Chara braunii HOM05D006161 ORTHO05D007483 2.7e-08 62.8 136 32.4


User provided reference genes

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