Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.74ATFD Arachis hypogaea HOM05D006591 ORTHO05D007861 1.1e-53 214.2 237 100.0
arahy.Tifrunner.gnm1.ann1.09DLU7 Arachis hypogaea HOM05D006591 ORTHO05D007861 4.6e-39 165.6 236 90.3
TPR.G2283 Trifolium pratense HOM05D006591 ORTHO05D007861 1.8e-35 153.7 114 70.2
QL03p070967 Quercus lobata HOM05D006591 ORTHO05D007861 5.2e-35 152.1 120 69.2
Phvul.002G068900 Phaseolus vulgaris HOM05D006591 ORTHO05D007861 9.8e-34 147.9 118 68.6
PGR119G1238 Punica granatum HOM05D006591 ORTHO05D007861 7.1e-32 141.7 115 66.1
COL.COLO4_05797 Corchorus olitorius HOM05D006591 ORTHO05D007861 2.1e-31 140.2 106 72.6
Glyma.02G113900 Glycine max HOM05D006591 ORTHO05D007861 4.6e-31 139.0 119 64.7
Gorai.009G326200 Gossypium raimondii HOM05D006591 ORTHO05D007861 1.0e-30 137.9 106 71.7
Gohir.D05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 1.7e-30 137.1 106 71.7
Cpa.g.sc1.95 Carica papaya HOM05D006591 ORTHO05D007861 2.3e-30 136.7 120 64.2
Solyc05g012590.4 Solanum lycopersicum HOM05D006591 ORTHO05D007861 2.3e-30 136.7 106 68.9
MELO3C002930.2 Cucumis melo HOM05D006591 ORTHO05D007861 3.0e-30 136.3 120 62.5
Gohir.A05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 3.0e-30 136.3 106 70.8
Duzib268G0337 Durio zibethinus HOM05D006591 ORTHO05D007861 9.5e-29 131.3 101 73.3
vmacro16368 Vaccinium macrocarpon HOM05D006591 ORTHO05D007861 1.2e-28 131.0 114 64.0
Hund25197 Selenicereus undatus HOM05D006591 ORTHO05D007861 1.4e-27 127.5 110 63.6
CSS0032544 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 2.3e-27 126.7 124 58.1
Haze_11932 Corylus avellana HOM05D006591 ORTHO05D007861 5.2e-27 125.6 145 53.1
Peaxi162Scf00314g00027 Petunia axillaris HOM05D006591 ORTHO05D007861 1.5e-26 124.0 110 61.8
Actinidia19919 Actinidia chinensis HOM05D006591 ORTHO05D007861 2.0e-26 123.6 122 56.6
Cc11_g12350 Coffea canephora HOM05D006591 ORTHO05D007861 9.9e-26 121.3 99 66.7
Rhsim12G0134100 Rhododendron simsii HOM05D006591 ORTHO05D007861 1.7e-25 120.6 148 51.4
BcaC04g21487 Brassica carinata HOM05D006591 ORTHO05D007861 8.3e-25 118.2 115 55.7
C09p31230 Brassica napus HOM05D006591 ORTHO05D007861 8.3e-25 118.2 115 55.7
BolC9t55979H Brassica oleracea HOM05D006591 ORTHO05D007861 8.3e-25 118.2 115 55.7
Psat2g128080 Pisum sativum HOM05D006591 ORTHO05D007861 3.2e-24 116.3 113 57.5
Ciclev10032613m.g Citrus clementina HOM05D006591 ORTHO05D007861 7.1e-24 115.2 115 56.5
Lj2g0025600 Lotus japonicus HOM05D006591 ORTHO05D007861 1.6e-23 114.0 123 54.5
Thhalv10004832m.g Eutrema salsugineum HOM05D006591 ORTHO05D007861 3.5e-23 112.8 115 55.7
Glyma.01G055500 Glycine max HOM05D006591 ORTHO05D007861 3.5e-23 112.8 121 55.4
Sopen05g007420 Solanum pennellii HOM05D006591 ORTHO05D007861 7.8e-23 111.7 106 59.4
PGSC0003DMG400028326 Solanum tuberosum HOM05D006591 ORTHO05D007861 7.8e-23 111.7 106 59.4
CSS0024373 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.3e-22 110.9 111 59.5
HanXRQChr17g0545461 Helianthus annuus HOM05D006591 ORTHO05D007861 1.7e-22 110.5 111 57.7
Actinidia31944 Actinidia chinensis HOM05D006591 ORTHO05D007861 3.9e-22 109.4 116 55.2
GSVIVG01012181001 Vitis vinifera HOM05D006591 ORTHO05D007861 3.9e-22 109.4 118 54.2
CSS0002938 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.9e-21 107.1 111 57.7
CSS0020090 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.9e-21 107.1 111 57.7
CANSAT64G0984 Cannabis sativa HOM05D006591 ORTHO05D007861 1.9e-21 107.1 121 52.9
DCAR_027452 Daucus carota HOM05D006591 ORTHO05D007861 2.5e-21 106.7 117 52.1
Dinv16706 Davidia involucrata HOM05D006591 ORTHO05D007861 2.5e-21 106.7 121 53.7
Lalb_Chr10g0098581 Lupinus albus HOM05D006591 ORTHO05D007861 4.3e-21 105.9 113 55.8
TWI79G1606 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 1.6e-20 104.0 120 50.0
Lj3C1032T3 Lonicera japonica HOM05D006591 ORTHO05D007861 8.1e-20 101.7 121 51.2
VMungo1215G0675 Vigna mungo HOM05D006591 ORTHO05D007861 8.1e-20 101.7 104 53.8
Atru.chr11.1685 Acer truncatum HOM05D006591 ORTHO05D007861 1.1e-19 101.3 122 50.8
Cfa008903 Carpinus fangiana HOM05D006591 ORTHO05D007861 2.4e-19 100.1 120 51.7
CSS0029304 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 3.1e-19 99.8 111 54.1
CAN.G1340.9 Capsicum annuum HOM05D006591 ORTHO05D007861 3.1e-19 99.8 101 56.4
TPR.G24426 Trifolium pratense HOM05D006591 ORTHO05D007861 4.0e-19 99.4 114 50.9
CiPaw.06G090100 Carya illinoinensis HOM05D006591 ORTHO05D007861 6.8e-19 98.6 120 51.7
Nn4g23331 Nelumbo nucifera HOM05D006591 ORTHO05D007861 8.9e-19 98.2 121 50.4
Prupe.1G282400 Prunus persica HOM05D006591 ORTHO05D007861 1.2e-18 97.8 121 50.4
Ah.02g126600 Amaranthus hybridus HOM05D006591 ORTHO05D007861 2.0e-18 97.1 114 50.9
Medtr5g043640 Medicago truncatula HOM05D006591 ORTHO05D007861 2.6e-18 96.7 113 52.2
MD16G1064400 Malus domestica HOM05D006591 ORTHO05D007861 5.8e-18 95.5 119 49.6
Gohir.D10G139700 Gossypium hirsutum HOM05D006591 ORTHO05D007861 7.6e-18 95.1 63 84.1
Sc11g0002290 Simmondsia chinensis HOM05D006591 ORTHO05D007861 7.6e-18 95.1 115 51.3
ECA246G1963 Erigeron canadensis HOM05D006591 ORTHO05D007861 1.3e-17 94.4 114 51.8
Manes.05G107800 Manihot esculenta HOM05D006591 ORTHO05D007861 1.7e-17 94.0 113 52.2
Nitab4.5_0000334g0240 Nicotiana tabacum HOM05D006591 ORTHO05D007861 1.7e-17 94.0 97 56.7
MD13G1065800 Malus domestica HOM05D006591 ORTHO05D007861 2.2e-17 93.6 119 47.9
TWI75G0359 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 2.9e-17 93.2 120 48.3
Oeu028261.1 Olea europaea HOM05D006591 ORTHO05D007861 3.8e-17 92.8 103 50.5
THA.LOC104801815 Tarenaya hassleriana HOM05D006591 ORTHO05D007861 6.4e-17 92.0 109 51.4
CsaV3_5G025480 Cucumis sativus L. HOM05D006591 ORTHO05D007861 8.4e-17 91.7 120 48.3
SEGI_35394 Sequoiadendron giganteum HOM05D006591 ORTHO05D007861 2.4e-16 90.1 99 48.5
SGA_v2.0_scaffold287G47153 Striga asiatica HOM05D006591 ORTHO05D007861 2.4e-16 90.1 106 55.7
CSS0029980 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 3.2e-16 89.7 100 56.0
Thecc.02G335700 Theobroma cacao HOM05D006591 ORTHO05D007861 3.2e-16 89.7 120 50.8
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 4.2e-16 89.4 98 52.0
Lsat_1_v5_gn_3_56260 Lactuca sativa HOM05D006591 ORTHO05D007861 4.2e-16 89.4 116 50.9
FAN22G1196 Fragaria x ananassa HOM05D006591 ORTHO05D007861 5.4e-16 89.0 110 50.0
Mapoly0001s0139 Marchantia polymorpha HOM05D006591 ORTHO05D007861 7.1e-16 88.6 100 49.0
RcHm_v2.0_Chr4g0438821 Rosa chinensis HOM05D006591 ORTHO05D007861 9.3e-16 88.2 109 50.5
AagrBONN_evm.TU.Sc2ySwM_344.1136 Anthoceros agrestis HOM05D006591 ORTHO05D007861 1.6e-15 87.4 104 49.0
Ca_04911_v3 Cicer arietinum L. HOM05D006591 ORTHO05D007861 2.7e-15 86.7 121 46.3
Potri.010G161300 Populus trichocarpa HOM05D006591 ORTHO05D007861 3.5e-15 86.3 109 50.5
ATR0111G005 Amborella trichopoda HOM05D006591 ORTHO05D007861 7.8e-15 85.1 121 42.1
MSTRG.2323 Avicennia marina HOM05D006591 ORTHO05D007861 7.8e-15 85.1 101 51.5
FAN17G0139 Fragaria x ananassa HOM05D006591 ORTHO05D007861 7.8e-15 85.1 108 49.1
FAN07G2187 Fragaria x ananassa HOM05D006591 ORTHO05D007861 1.0e-14 84.7 100 50.0
Pp3c6_21850 Physcomitrium patens HOM05D006591 ORTHO05D007861 1.3e-14 84.3 101 46.5
Sabra10G0122800 Salix brachista HOM05D006591 ORTHO05D007861 1.3e-14 84.3 110 50.0
BraA09t38037Z Brassica rapa HOM05D006591 ORTHO05D007861 1.7e-14 84.0 116 44.8
FvH4_4g30470 Fragaria vesca HOM05D006591 ORTHO05D007861 1.7e-14 84.0 108 48.1
FAN12G1471 Fragaria x ananassa HOM05D006591 ORTHO05D007861 1.7e-14 84.0 108 48.1
TAR374G1558 Trochodendron aralioides HOM05D006591 ORTHO05D007861 1.7e-14 84.0 119 43.7
BcaC02g07876 Brassica carinata HOM05D006591 ORTHO05D007861 3.9e-14 82.8 112 45.5
A09p24440 Brassica napus HOM05D006591 ORTHO05D007861 5.1e-14 82.4 99 47.5
BcaB07g30669 Brassica carinata HOM05D006591 ORTHO05D007861 1.9e-13 80.5 116 43.1
PSO017G3262 Papaver somniferum HOM05D006591 ORTHO05D007861 3.3e-13 79.7 121 43.8
EL10Ac6g14958 Beta vulgaris HOM05D006591 ORTHO05D007861 5.6e-13 79.0 96 49.0
Cre02.g117550 Chlamydomonas reinhardtii HOM05D006591 ORTHO05D007861 7.3e-13 78.6 98 42.9
Sp2g14340 Schrenkiella parvula HOM05D006591 ORTHO05D007861 9.6e-13 78.2 116 44.0
C06p01310 Brassica napus HOM05D006591 ORTHO05D007861 1.3e-12 77.8 107 47.7
EL10Ac6g14961 Beta vulgaris HOM05D027931 ORTHO05D007861 1.6e-12 77.4 102 41.2
Carub.0005s0239 Capsella rubella HOM05D006591 ORTHO05D007861 1.6e-12 77.4 115 41.7
PSO478G2874 Papaver somniferum HOM05D006591 ORTHO05D007861 2.1e-12 77.0 121 43.8
Migut.E00061 Erythranthe guttata HOM05D006591 ORTHO05D007861 4.8e-12 75.9 101 48.5
Aqoxy3G00449 Aquilegia oxysepala HOM05D006591 ORTHO05D007861 6.2e-12 75.5 97 45.4
HPP92_018457 Vanilla planifolia HOM05D006591 ORTHO05D007861 6.2e-12 75.5 75 53.3
CARHR145770 Cardamine hirsuta HOM05D006591 ORTHO05D007861 1.4e-11 74.3 114 43.0
AL5G13180 Arabidopsis lyrata HOM05D006591 ORTHO05D007861 9.0e-11 71.6 112 40.2
CBR_g23768 Chara braunii HOM05D006591 ORTHO05D007861 1.5e-10 70.9 98 40.8
unitig_22.g5555 Utricularia gibba HOM05D006591 ORTHO05D007861 2.0e-10 70.5 109 44.0
EL10Ac6g14960 Beta vulgaris HOM05D006591 ORTHO05D007861 4.4e-10 69.3 110 40.0
Eucgr.G02461 Eucalyptus grandis HOM05D006591 ORTHO05D007861 7.6e-10 68.6 117 42.7
BolC4t27718H Brassica oleracea HOM05D006591 ORTHO05D007861 1.7e-09 67.4 128 39.1
AT2G03430 Arabidopsis thaliana HOM05D006591 ORTHO05D007861 2.2e-09 67.0 109 40.4
A07p05510 Brassica napus HOM05D006591 ORTHO05D007861 4.9e-09 65.9 51 60.8
Zm00001eb214530 Zea mays HOM05D006591 ORTHO05D007861 8.4e-09 65.1 109 41.3
CDE07G0054 Ceratophyllum demersum HOM05D006591 ORTHO05D007861 1.6e-07 60.8 108 38.9
MBI18_g32376_MAGBIO Magnolia biondii HOM05D006591 ORTHO05D007861 2.1e-07 60.5 47 63.8
Sed0000747 Sechium edule HOM05D006591 ORTHO05D007861 6.0e-07 58.9 105 43.8


User provided reference genes

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