Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.72JBMR Arachis hypogaea HOM05D008547 ORTHO05D010515 1.4e-223 779.2 372 100.0
arahy.Tifrunner.gnm1.ann1.MSS51R Arachis hypogaea HOM05D008547 ORTHO05D010515 9.5e-217 756.5 372 97.3
Lj2g0004475 Lotus japonicus HOM05D008547 ORTHO05D010515 2.6e-137 492.7 372 65.3
Medtr8g027525 Medicago truncatula HOM05D008547 ORTHO05D010515 9.3e-55 218.4 369 37.4
Medtr1g102770 Medicago truncatula HOM05D008547 ORTHO05D010515 1.8e-50 204.1 369 35.8
Medtr5g009560 Medicago truncatula HOM05D008547 ORTHO05D010515 1.0e-48 198.4 368 35.3
TPR.G16819 Trifolium pratense HOM05D008547 ORTHO05D010515 1.3e-48 198.0 374 33.7
Medtr8g027595 Medicago truncatula HOM05D008547 ORTHO05D010515 1.6e-46 191.0 386 34.5
Medtr5g090860 Medicago truncatula HOM05D008547 ORTHO05D010515 1.9e-44 184.1 397 31.5
TPR.G16823 Trifolium pratense HOM05D008547 ORTHO05D010515 5.7e-44 182.6 399 32.6
Ca_23530_v3 Cicer arietinum L. HOM05D008547 ORTHO05D010515 7.4e-44 182.2 386 31.3
Psat4g161600 Pisum sativum HOM05D008547 ORTHO05D010515 2.2e-43 180.6 394 32.7
TPR.G26111 Trifolium pratense HOM05D008547 ORTHO05D010515 2.8e-43 180.3 373 33.5
CSS0006076 Camellia sinensis var. sinensis HOM05D006664 ORTHO05D009007 1.1e-42 178.3 368 33.7
CSS0029898 Camellia sinensis var. sinensis HOM05D006664 ORTHO05D009007 4.1e-42 176.4 368 33.2
TPR.G39730 Trifolium pratense HOM05D008547 ORTHO05D010515 2.6e-41 173.7 394 33.5
Psat4g161480 Pisum sativum HOM05D008547 ORTHO05D010515 1.3e-40 171.4 366 31.1
Dinv12850 Davidia involucrata HOM05D006664 ORTHO05D009007 1.9e-39 167.5 365 34.0
TPR.G12161 Trifolium pratense HOM05D008547 ORTHO05D010515 1.9e-39 167.5 376 32.7
Psat4g187360 Pisum sativum HOM05D008547 ORTHO05D010515 1.8e-37 161.0 372 30.9
TPR.G8333 Trifolium pratense HOM05D008547 ORTHO05D010515 2.3e-37 160.6 365 31.8
Dinv07586 Davidia involucrata HOM05D006664 ORTHO05D009007 6.7e-37 159.1 331 31.4
CSS0003999 Camellia sinensis var. sinensis HOM05D006664 ORTHO05D009007 2.5e-36 157.1 369 31.7
Psat1g047400 Pisum sativum HOM05D008547 ORTHO05D010515 8.2e-35 152.1 371 29.4
TPR.G27684 Trifolium pratense HOM05D008547 ORTHO05D010515 8.2e-35 152.1 342 32.5
Ca_17126_v3 Cicer arietinum L. HOM05D008547 ORTHO05D010515 2.4e-34 150.6 369 32.0
TPR.G32061 Trifolium pratense HOM05D008547 ORTHO05D010515 4.1e-34 149.8 398 30.7
Medtr8g065650 Medicago truncatula HOM05D008547 ORTHO05D010515 9.1e-34 148.7 400 29.8
Medtr6g004080 Medicago truncatula HOM05D008547 ORTHO05D010515 2.9e-32 143.7 287 33.8
Psat4g206720 Pisum sativum HOM05D008547 ORTHO05D010515 1.6e-30 137.9 250 38.8
Ca_14816_v3 Cicer arietinum L. HOM05D008547 ORTHO05D010515 2.7e-30 137.1 369 30.9
Ca_15277_v3 Cicer arietinum L. HOM05D008547 ORTHO05D010515 3.6e-30 136.7 357 31.7
Ca_15416_v3 Cicer arietinum L. HOM05D008547 ORTHO05D010515 3.6e-30 136.7 357 31.7
Medtr1g017800 Medicago truncatula HOM05D008547 ORTHO05D010515 3.9e-29 133.3 354 30.5
TPR.G16818 Trifolium pratense HOM05D008547 ORTHO05D010515 3.9e-29 133.3 288 33.3
COL.COLO4_24243 Corchorus olitorius HOM05D050221 ORTHO05D010515 6.7e-29 132.5 381 30.2
Dinv12853 Davidia involucrata HOM05D006664 ORTHO05D009007 8.8e-29 132.1 330 31.5
COL.COLO4_15201 Corchorus olitorius HOM05D008547 ORTHO05D010515 1.1e-28 131.7 238 35.3
TPR.G23739 Trifolium pratense HOM05D008547 ORTHO05D010515 1.3e-27 128.3 228 33.8
Medtr5g090850 Medicago truncatula HOM05D008547 ORTHO05D010515 1.7e-27 127.9 347 28.5
Migut.D00751 Erythranthe guttata HOM05D006664 ORTHO05D009007 8.5e-24 115.5 380 23.9
Medtr5g012050 Medicago truncatula HOM05D008547 ORTHO05D010515 8.5e-24 115.5 174 37.9
CiPaw.05G236300 Carya illinoinensis HOM05D006664 ORTHO05D009007 2.7e-22 110.5 364 26.9
Migut.A00601 Erythranthe guttata HOM05D006664 ORTHO05D009007 6.1e-22 109.4 365 25.8
Migut.A00604 Erythranthe guttata HOM05D006664 ORTHO05D009007 8.8e-21 105.5 361 26.9
Migut.D00613 Erythranthe guttata HOM05D006664 ORTHO05D009007 1.8e-18 97.8 272 27.9
TAR185G0005 Trochodendron aralioides HOM05D008437 ORTHO05D008819 2.4e-18 97.4 361 25.8
Migut.A00598 Erythranthe guttata HOM05D006664 ORTHO05D009007 2.6e-17 94.0 269 27.5
SalBow1G5157 Salvia bowleyana HOM05D006664 ORTHO05D009007 1.0e-16 92.0 272 27.9
Migut.A00619 Erythranthe guttata HOM05D006664 ORTHO05D009007 1.3e-16 91.7 359 24.8
Actinidia38558 Actinidia chinensis HOM05D006664 ORTHO05D009007 2.2e-16 90.9 313 30.4
SalBow1G5395 Salvia bowleyana HOM05D006664 ORTHO05D009007 5.0e-16 89.7 277 26.0
Medtr3g023820 Medicago truncatula HOM05D008547 ORTHO05D010515 1.9e-15 87.8 168 34.5
TPR.G21917 Trifolium pratense HOM05D008547 ORTHO05D010515 1.9e-15 87.8 142 35.9
Migut.A00599 Erythranthe guttata HOM05D006664 ORTHO05D009007 4.2e-15 86.7 268 26.9
SalBow1G1774 Salvia bowleyana HOM05D006664 ORTHO05D009007 9.4e-15 85.5 361 26.0
Cpa.g.sc73.88 Carica papaya HOM05D006664 ORTHO05D009007 1.6e-14 84.7 268 29.9
SalBow1G3386 Salvia bowleyana HOM05D006664 ORTHO05D009007 1.6e-14 84.7 271 25.8
SalBow1G6396 Salvia bowleyana HOM05D006664 ORTHO05D009007 1.6e-14 84.7 268 26.9
SalBow1G5259 Salvia bowleyana HOM05D006664 ORTHO05D009007 2.7e-14 84.0 351 24.2
SalBow1G1867 Salvia bowleyana HOM05D006664 ORTHO05D009007 3.6e-14 83.6 351 24.2
Migut.E01487 Erythranthe guttata HOM05D006664 ORTHO05D009007 6.1e-14 82.8 379 24.5
SalBow1G5785 Salvia bowleyana HOM05D006664 ORTHO05D009007 6.1e-14 82.8 265 24.5
Migut.A00602 Erythranthe guttata HOM05D006664 ORTHO05D009007 8.0e-14 82.4 228 27.6
MD02G1067600 Malus domestica HOM05D009792 ORTHO05D009073 1.4e-13 81.6 320 26.2
SalBow1G5956 Salvia bowleyana HOM05D006664 ORTHO05D009007 1.8e-13 81.3 279 25.4
SGA_v2.0_scaffold69G23259 Striga asiatica HOM05D006664 ORTHO05D009007 1.8e-13 81.3 216 32.4
SalBow1G2059 Salvia bowleyana HOM05D006664 ORTHO05D009007 2.3e-13 80.9 270 25.2
Migut.A00481 Erythranthe guttata HOM05D006664 ORTHO05D009007 4.0e-13 80.1 267 24.0
SalBow1G2277 Salvia bowleyana HOM05D006664 ORTHO05D009007 4.0e-13 80.1 353 24.1
SalBow1G7640 Salvia bowleyana HOM05D006664 ORTHO05D009007 6.7e-13 79.3 272 26.1
Migut.E01489 Erythranthe guttata HOM05D006664 ORTHO05D009007 8.8e-13 79.0 315 24.4
SalBow1G0518 Salvia bowleyana HOM05D006664 ORTHO05D009007 8.8e-13 79.0 351 21.9
Migut.A00615 Erythranthe guttata HOM05D006664 ORTHO05D009007 1.5e-12 78.2 284 23.6
SalBow1G0567 Salvia bowleyana HOM05D006664 ORTHO05D009007 1.5e-12 78.2 372 23.1
SalBow1G7502 Salvia bowleyana HOM05D006664 ORTHO05D009007 1.5e-12 78.2 270 25.9
TAR636G0594 Trochodendron aralioides HOM05D006664 ORTHO05D008819 3.3e-12 77.0 184 31.5
SalBow1G2147 Salvia bowleyana HOM05D006664 ORTHO05D009007 4.4e-12 76.6 263 26.2
Medtr5g013170 Medicago truncatula HOM05D008547 ORTHO05D010515 5.7e-12 76.3 100 38.0
SalBow1G3006 Salvia bowleyana HOM05D006664 ORTHO05D009007 7.5e-12 75.9 272 26.1
Migut.A00618 Erythranthe guttata HOM05D006664 ORTHO05D009007 9.7e-12 75.5 296 25.7
Gohir.D05G386150 Gossypium hirsutum HOM05D008437 ORTHO05D010577 1.3e-11 75.1 391 23.3
SalBow1G3269 Salvia bowleyana HOM05D006664 ORTHO05D009007 1.3e-11 75.1 383 22.7
Psat4g188000 Pisum sativum HOM05D008547 ORTHO05D010515 1.7e-11 74.7 145 31.7
Gohir.A04G003750 Gossypium hirsutum HOM05D008437 ORTHO05D010577 2.2e-11 74.3 391 24.0
Aqoxy4G00156 Aquilegia oxysepala HOM05D017325 ORTHO05D008819 2.8e-11 73.9 381 25.7
SalBow1G1554 Salvia bowleyana HOM05D006664 ORTHO05D009007 2.8e-11 73.9 274 25.2
SalBow1G4503 Salvia bowleyana HOM05D000486 ORTHO05D009007 2.8e-11 73.9 258 22.9
Gorai.009G452600 Gossypium raimondii HOM05D008437 ORTHO05D010577 4.8e-11 73.2 391 23.3
Medtr1g103170 Medicago truncatula HOM05D008547 ORTHO05D010515 4.8e-11 73.2 141 36.2
CiPaw.07G234400 Carya illinoinensis HOM05D007726 ORTHO05D008819 1.1e-10 72.0 380 25.0
SalBow1G6969 Salvia bowleyana HOM05D006664 ORTHO05D009007 1.4e-10 71.6 246 26.4
TAR624G0326 Trochodendron aralioides HOM05D000007 ORTHO05D000521 1.4e-10 71.6 245 24.1
Atru.chr13.2339 Acer truncatum HOM05D007726 ORTHO05D008819 2.4e-10 70.9 411 24.1
Migut.A00084 Erythranthe guttata HOM05D006664 ORTHO05D009007 2.4e-10 70.9 363 24.2
Thecc.06G116700 Theobroma cacao HOM05D008547 ORTHO05D010515 4.1e-10 70.1 258 24.8
SalBow1G0552 Salvia bowleyana HOM05D006664 ORTHO05D009007 9.1e-10 68.9 372 23.7
TAR381G1565 Trochodendron aralioides HOM05D007726 ORTHO05D008819 1.2e-09 68.6 376 25.8
Nn8g40182 Nelumbo nucifera HOM05D008437 ORTHO05D008819 2.0e-09 67.8 264 25.0
Hma1.2p1_0244F.1_g101190 Hydrangea macrophylla HOM05D008437 ORTHO05D010577 2.7e-09 67.4 293 25.9
SalBow1G1954 Salvia bowleyana HOM05D006664 ORTHO05D009007 2.7e-09 67.4 366 23.2
SalBow1G4853 Salvia bowleyana HOM05D006664 ORTHO05D009007 2.7e-09 67.4 366 23.2
TAR624G0322 Trochodendron aralioides HOM05D000007 ORTHO05D000521 2.7e-09 67.4 191 26.2
Aqoxy4G00777 Aquilegia oxysepala HOM05D017325 ORTHO05D008819 3.5e-09 67.0 381 24.4
Ciclev10020371m.g Citrus clementina HOM05D007726 ORTHO05D008819 5.9e-09 66.2 374 25.7
Migut.H00393 Erythranthe guttata HOM05D006664 ORTHO05D009007 1.0e-08 65.5 238 26.1
COL.COLO4_27629 Corchorus olitorius HOM05D008437 ORTHO05D010577 1.7e-08 64.7 375 22.9
TAR624G0230 Trochodendron aralioides HOM05D000007 ORTHO05D000676 1.7e-08 64.7 248 24.2
unitig_26.g8888 Utricularia gibba HOM05D000007 ORTHO05D000017 2.9e-08 63.9 286 26.6
Medtr5g013160 Medicago truncatula HOM05D008547 ORTHO05D010515 3.8e-08 63.5 112 33.9
Actinidia13257 Actinidia chinensis HOM05D007726 ORTHO05D008819 5.0e-08 63.2 317 23.7
Aqoxy4G00159 Aquilegia oxysepala HOM05D017325 ORTHO05D008819 2.5e-07 60.8 128 32.0
Aqoxy52s004 Aquilegia oxysepala HOM05D017325 ORTHO05D008819 2.5e-07 60.8 139 30.2
Peaxi162Scf00141g00138 Petunia axillaris HOM05D008437 ORTHO05D010577 4.2e-07 60.1 230 23.0
Aqoxy1G01388 Aquilegia oxysepala HOM05D017325 ORTHO05D008819 5.5e-07 59.7 133 33.1
COL.COLO4_14611 Corchorus olitorius HOM05D008437 ORTHO05D010577 5.5e-07 59.7 245 25.3
Aqoxy5G04106 Aquilegia oxysepala HOM05D007726 ORTHO05D008819 9.4e-07 58.9 156 30.1
TPR.G20414 Trifolium pratense HOM05D008547 ORTHO05D010515 9.4e-07 58.9 101 40.6
Lj6A793G95 Lonicera japonica HOM05D006664 ORTHO05D009007 1.6e-06 58.2 109 31.2
AUR62019384 Chenopodium quinoa HOM05D000007 ORTHO05D000017 2.1e-06 57.8 279 22.9
COL.COLO4_32922 Corchorus olitorius HOM05D007560 ORTHO05D005947 2.7e-06 57.4 242 27.7
CSS0044623 Camellia sinensis var. sinensis HOM05D008437 ORTHO05D010577 4.7e-06 56.6 184 28.3
Os04g0191600 Oryza sativa ssp. japonica HOM05D011488 ORTHO05D013340 4.7e-06 56.6 240 25.0
Ah.13g070150 Amaranthus hybridus HOM05D000007 ORTHO05D000017 6.1e-06 56.2 282 23.0
Lj8C593T5 Lonicera japonica HOM05D000007 ORTHO05D000521 6.1e-06 56.2 172 25.6
Medtr8g027530 Medicago truncatula HOM05D008547 ORTHO05D010515 8.0e-06 55.8 120 35.0
Os04g0191800 Oryza sativa ssp. japonica HOM05D011488 ORTHO05D013340 8.0e-06 55.8 245 24.9
PSO832G0564 Papaver somniferum HOM05D000007 ORTHO05D000676 8.0e-06 55.8 269 26.4


User provided reference genes

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