Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.6YLD65 Arachis hypogaea HOM05D002092 ORTHO05D084942 1.3e-57 226.1 112 100.0
Ca_21373_v3 Cicer arietinum L. HOM05D002092 ORTHO05D007041 1.5e-16 89.7 47 87.2
Glyma.13G119100 Glycine max HOM05D002092 ORTHO05D007041 1.5e-16 89.7 47 87.2
Glyma.17G041100 Glycine max HOM05D002092 ORTHO05D007041 1.5e-16 89.7 47 87.2
Medtr4g123980 Medicago truncatula HOM05D002092 ORTHO05D007041 1.5e-16 89.7 47 87.2
Psat4g021200 Pisum sativum HOM05D002092 ORTHO05D007041 1.5e-16 89.7 47 87.2
TPR.G12594 Trifolium pratense HOM05D002092 ORTHO05D007041 1.5e-16 89.7 47 87.2
EL10Ac3g06236 Beta vulgaris HOM05D002092 ORTHO05D007041 3.3e-16 88.6 47 87.2
Lj4g0022953 Lotus japonicus HOM05D002092 ORTHO05D007041 3.3e-16 88.6 47 85.1
Atru.chr4.3168 Acer truncatum HOM05D002092 ORTHO05D007041 5.7e-16 87.8 47 85.1
Actinidia18512 Actinidia chinensis HOM05D002092 ORTHO05D007041 5.7e-16 87.8 47 85.1
CSS0002469 Camellia sinensis var. sinensis HOM05D002092 ORTHO05D007041 5.7e-16 87.8 47 85.1
CiPaw.01G128500 Carya illinoinensis HOM05D002092 ORTHO05D007041 5.7e-16 87.8 47 85.1
AUR62002541 Chenopodium quinoa HOM05D002092 ORTHO05D007041 5.7e-16 87.8 47 85.1
Ciclev10004546m.g Citrus clementina HOM05D002092 ORTHO05D007041 5.7e-16 87.8 47 85.1
Dinv01476 Davidia involucrata HOM05D002092 ORTHO05D007041 5.7e-16 87.8 47 85.1
Lj6A702T45 Lonicera japonica HOM05D002092 ORTHO05D007041 5.7e-16 87.8 47 85.1
Nn4g25366 Nelumbo nucifera HOM05D002092 ORTHO05D007041 5.7e-16 87.8 47 85.1
Phvul.003G122300 Phaseolus vulgaris HOM05D002092 ORTHO05D007041 5.7e-16 87.8 47 85.1
Potri.008G205900 Populus trichocarpa HOM05D002092 ORTHO05D007041 5.7e-16 87.8 47 85.1
Potri.010G002900 Populus trichocarpa HOM05D002092 ORTHO05D007041 5.7e-16 87.8 47 85.1
PGR004G1753 Punica granatum HOM05D002092 ORTHO05D007041 5.7e-16 87.8 47 85.1
Sabra10G0002300 Salix brachista HOM05D002092 ORTHO05D007041 5.7e-16 87.8 47 85.1
Hund22644 Selenicereus undatus HOM05D002092 ORTHO05D007041 5.7e-16 87.8 47 85.1
vmacro08015 Vaccinium macrocarpon HOM05D002092 ORTHO05D007041 5.7e-16 87.8 47 85.1
CANSAT78G1398 Cannabis sativa HOM05D002092 ORTHO05D007041 9.7e-16 87.0 47 83.0
MSTRG.10185 Avicennia marina HOM05D002092 ORTHO05D007041 1.3e-15 86.7 47 83.0
CiPaw.02G068900 Carya illinoinensis HOM05D002092 ORTHO05D007041 1.3e-15 86.7 47 83.0
Cc03_g00070 Coffea canephora HOM05D002092 ORTHO05D007041 1.3e-15 86.7 47 83.0
DCAR_023413 Daucus carota HOM05D002092 ORTHO05D007041 1.3e-15 86.7 47 83.0
Migut.C00318 Erythranthe guttata HOM05D002092 ORTHO05D007041 1.3e-15 86.7 47 83.0
Migut.G00901 Erythranthe guttata HOM05D002092 ORTHO05D007041 1.3e-15 86.7 47 83.0
Eucgr.H04128 Eucalyptus grandis HOM05D002092 ORTHO05D007041 1.3e-15 86.7 47 83.0
HanXRQChr05g0148981 Helianthus annuus HOM05D002092 ORTHO05D007041 1.3e-15 86.7 47 83.0
Hma1.2p1_1449F.1_g284065 Hydrangea macrophylla HOM05D002092 ORTHO05D007041 1.3e-15 86.7 47 85.1
Hma1.2p1_2234F.1_g317640 Hydrangea macrophylla HOM05D002092 ORTHO05D007041 1.3e-15 86.7 47 85.1
Phvul.009G220400 Phaseolus vulgaris HOM05D002092 ORTHO05D007041 1.3e-15 86.7 47 83.0
QL06p014379 Quercus lobata HOM05D002092 ORTHO05D007041 1.3e-15 86.7 47 83.0
BolC7t44483H Brassica oleracea HOM05D002092 ORTHO05D007041 1.7e-15 86.3 47 85.1
Cfa015737 Carpinus fangiana HOM05D002092 ORTHO05D007041 1.7e-15 86.3 47 83.0
Duzib212G0591 Durio zibethinus HOM05D002092 ORTHO05D007041 1.7e-15 86.3 47 85.1
FvH4_4g21590 Fragaria vesca HOM05D002092 ORTHO05D007041 1.7e-15 86.3 47 83.0
FAN07G0083 Fragaria x ananassa HOM05D002092 ORTHO05D007041 1.7e-15 86.3 47 83.0
FAN17G1215 Fragaria x ananassa HOM05D002092 ORTHO05D007041 1.7e-15 86.3 47 83.0
Gohir.A02G059000 Gossypium hirsutum HOM05D002092 ORTHO05D007041 1.7e-15 86.3 47 85.1
Gorai.005G073300 Gossypium raimondii HOM05D002092 ORTHO05D007041 1.7e-15 86.3 47 85.1
Lalb_Chr12g0200551 Lupinus albus HOM05D002092 ORTHO05D007041 1.7e-15 86.3 47 85.1
MD13G1140600 Malus domestica HOM05D002092 ORTHO05D007041 1.7e-15 86.3 47 83.0
MD16G1135200 Malus domestica HOM05D002092 ORTHO05D007041 1.7e-15 86.3 47 83.0
RcHm_v2.0_Chr4g0427701 Rosa chinensis HOM05D002092 ORTHO05D007041 1.7e-15 86.3 47 83.0
SGA_v2.0_scaffold157G37393 Striga asiatica HOM05D002092 ORTHO05D007041 1.7e-15 86.3 47 85.1
Thecc.04G313900 Theobroma cacao HOM05D002092 ORTHO05D007041 1.7e-15 86.3 47 85.1
BcaC03g17690 Brassica carinata HOM05D002092 ORTHO05D007041 2.2e-15 85.9 58 72.4
A02p37830 Brassica napus HOM05D002092 ORTHO05D007041 2.2e-15 85.9 58 72.4
C02p56990 Brassica napus HOM05D002092 ORTHO05D007041 2.2e-15 85.9 58 72.4
BolC2t11769H Brassica oleracea HOM05D002092 ORTHO05D007041 2.2e-15 85.9 58 72.4
BraA02t08765Z Brassica rapa HOM05D002092 ORTHO05D007041 2.2e-15 85.9 58 72.4
SalBow8G4005 Salvia bowleyana HOM05D002092 ORTHO05D007041 2.2e-15 85.9 47 80.9
VMungo1215G0636 Vigna mungo HOM05D002092 ORTHO05D007041 2.2e-15 85.9 47 85.1
GSVIVG01017695001 Vitis vinifera HOM05D002092 ORTHO05D007041 2.2e-15 85.9 47 83.0
AL8G22200 Arabidopsis lyrata HOM05D002092 ORTHO05D007041 2.8e-15 85.5 55 74.5
AT5G48960 Arabidopsis thaliana HOM05D002092 ORTHO05D007041 2.8e-15 85.5 55 74.5
BcaB07g34209 Brassica carinata HOM05D002092 ORTHO05D007041 2.8e-15 85.5 55 74.5
BcaC06g30737 Brassica carinata HOM05D002092 ORTHO05D007041 2.8e-15 85.5 55 74.5
A06p38670 Brassica napus HOM05D002092 ORTHO05D007041 2.8e-15 85.5 55 74.5
C07p39590 Brassica napus HOM05D002092 ORTHO05D007041 2.8e-15 85.5 55 74.5
BraA06t26781Z Brassica rapa HOM05D002092 ORTHO05D007041 2.8e-15 85.5 55 74.5
Carub.0008s0871 Capsella rubella HOM05D002092 ORTHO05D007041 2.8e-15 85.5 55 74.5
CAN.G484.114 Capsicum annuum HOM05D002092 ORTHO05D007041 2.8e-15 85.5 47 80.9
CARHR284570 Cardamine hirsuta HOM05D002092 ORTHO05D007041 2.8e-15 85.5 55 74.5
ClCG06G004150 Citrullus lanatus HOM05D002092 ORTHO05D007041 2.8e-15 85.5 47 83.0
Dinv29498 Davidia involucrata HOM05D002092 ORTHO05D007041 2.8e-15 85.5 47 83.0
Thhalv10003802m.g Eutrema salsugineum HOM05D002092 ORTHO05D007041 2.8e-15 85.5 55 74.5
Nitab4.5_0000978g0080 Nicotiana tabacum HOM05D002092 ORTHO05D007041 2.8e-15 85.5 47 80.9
Nitab4.5_0002466g0050 Nicotiana tabacum HOM05D002092 ORTHO05D007041 2.8e-15 85.5 47 80.9
Peaxi162Scf00323g00822 Petunia axillaris HOM05D002092 ORTHO05D007041 2.8e-15 85.5 47 80.9
Prupe.1G104000 Prunus persica HOM05D002092 ORTHO05D007041 2.8e-15 85.5 47 83.0
Solyc12g098830.2 Solanum lycopersicum HOM05D002092 ORTHO05D007041 2.8e-15 85.5 47 80.9
Sopen12g033570 Solanum pennellii HOM05D002092 ORTHO05D007041 2.8e-15 85.5 47 80.9
TAR633G1005 Trochodendron aralioides HOM05D002092 ORTHO05D007041 2.8e-15 85.5 47 83.0
ECA246G4720 Erigeron canadensis HOM05D002092 ORTHO05D007041 3.7e-15 85.1 47 83.0
Pp3c8_7530 Physcomitrium patens HOM05D002092 ORTHO05D007041 3.7e-15 85.1 83 54.2
Sed0019064 Sechium edule HOM05D002092 ORTHO05D007041 3.7e-15 85.1 47 83.0
Glyma.15G187000 Glycine max HOM05D002092 ORTHO05D007041 4.8e-15 84.7 47 80.9
Oeu002202.1 Olea europaea HOM05D002092 ORTHO05D007041 4.8e-15 84.7 47 80.9
Sp2g19340 Schrenkiella parvula HOM05D002092 ORTHO05D007041 4.8e-15 84.7 65 66.2
THA.LOC104818932 Tarenaya hassleriana HOM05D002092 ORTHO05D007041 4.8e-15 84.7 47 83.0
Aqoxy2G02499 Aquilegia oxysepala HOM05D002092 ORTHO05D007041 6.3e-15 84.3 47 80.9
PSO210G1155 Papaver somniferum HOM05D002092 ORTHO05D007041 6.3e-15 84.3 47 80.9
PSO761G0176 Papaver somniferum HOM05D002092 ORTHO05D007041 6.3e-15 84.3 47 80.9
CsaV3_6G000280 Cucumis sativus L. HOM05D002092 ORTHO05D007041 8.2e-15 84.0 47 83.0
Lalb_Chr07g0181631 Lupinus albus HOM05D002092 ORTHO05D007041 1.4e-14 83.2 48 79.2
MBI18_g10381_MAGBIO Magnolia biondii HOM05D002092 ORTHO05D007041 1.8e-14 82.8 59 66.1
Manes.03G212300 Manihot esculenta HOM05D002092 ORTHO05D007041 1.8e-14 82.8 68 61.8
CDE02G3170 Ceratophyllum demersum HOM05D002092 ORTHO05D007041 2.4e-14 82.4 61 65.6
Mapoly0044s0089 Marchantia polymorpha HOM05D002092 ORTHO05D007041 2.4e-14 82.4 49 77.6
Sc13g0008030 Simmondsia chinensis HOM05D002092 ORTHO05D007041 2.4e-14 82.4 47 80.9
Zm00001eb333800 Zea mays HOM05D002092 ORTHO05D007041 3.1e-14 82.0 47 78.7
SMO118G0340 Selaginella moellendorffii HOM05D002092 ORTHO05D007041 4.1e-14 81.6 46 80.4
AagrBONN_evm.TU.Sc2ySwM_117.1377 Anthoceros agrestis HOM05D002092 ORTHO05D007041 7.0e-14 80.9 46 80.4
SEGI_14302 Sequoiadendron giganteum HOM05D002092 ORTHO05D007041 7.0e-14 80.9 46 80.4
THA.LOC104827346 Tarenaya hassleriana HOM05D002092 ORTHO05D007041 9.1e-14 80.5 47 78.7
C06p39650 Brassica napus HOM05D002092 ORTHO05D018501 1.2e-13 80.1 56 71.4
ATR0796G082 Amborella trichopoda HOM05D002092 ORTHO05D007041 2.0e-13 79.3 47 74.5
TAR636G2233 Trochodendron aralioides HOM05D001914 ORTHO05D007041 2.7e-13 79.0 104 50.0
Pp3c3_29260 Physcomitrium patens HOM05D002092 ORTHO05D007041 3.5e-13 78.6 81 51.9
Aa31sc279G30 Aethionema arabicum HOM05D002092 ORTHO05D007041 4.5e-13 78.2 57 70.2
BcaC08g46066 Brassica carinata HOM05D002092 ORTHO05D018501 5.9e-13 77.8 56 69.6
CBR_g36890 Chara braunii HOM05D002092 ORTHO05D007041 1.1e-11 73.6 50 72.0
Haze_00759 Corylus avellana HOM05D002092 ORTHO05D007041 3.2e-11 72.0 38 86.8
Cre13.g573150 Chlamydomonas reinhardtii HOM05D002092 ORTHO05D007041 1.8e-09 66.2 45 71.1
arahy.Tifrunner.gnm1.ann1.370KX3 Arachis hypogaea HOM05D002092 ORTHO05D084900 2.2e-07 59.3 31 90.3
BcaC01g02070 Brassica carinata HOM05D002092 ORTHO05D018501 3.7e-07 58.5 64 48.4
A04p00660 Brassica napus HOM05D000494 ORTHO05D000556 1.8e-06 56.2 32 78.1
BraA04t15785Z Brassica rapa HOM05D000494 ORTHO05D000556 1.8e-06 56.2 32 78.1


User provided reference genes

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