Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.6XTR6T Arachis hypogaea HOM05D007481 ORTHO05D009444 4.0e-164 581.3 273 100.0
arahy.Tifrunner.gnm1.ann1.7RHW31 Arachis hypogaea HOM05D007481 ORTHO05D009444 3.8e-138 495.0 247 96.0
Lj3g0018029 Lotus japonicus HOM05D007481 ORTHO05D009444 1.3e-114 416.8 248 80.6
Phvul.010G001400 Phaseolus vulgaris HOM05D007481 ORTHO05D009444 5.5e-113 411.4 248 79.4
Glyma.03G058200 Glycine max HOM05D007481 ORTHO05D009444 1.6e-112 409.8 248 79.4
Medtr4g012440 Medicago truncatula HOM05D007481 ORTHO05D009444 3.9e-111 405.2 250 77.2
Ca_20231_v3 Cicer arietinum L. HOM05D007481 ORTHO05D009444 1.1e-110 403.7 248 76.6
Lalb_Chr07g0193571 Lupinus albus HOM05D007481 ORTHO05D009444 1.1e-110 403.7 249 79.1
Psat7g244960 Pisum sativum HOM05D007481 ORTHO05D009444 1.5e-107 393.3 249 74.3
TPR.G13336 Trifolium pratense HOM05D007481 ORTHO05D009444 2.6e-107 392.5 252 75.4
QL07p035708 Quercus lobata HOM05D007481 ORTHO05D009444 1.6e-99 366.7 245 71.8
RcHm_v2.0_Chr3g0463171 Rosa chinensis HOM05D007481 ORTHO05D009444 3.8e-98 362.1 245 71.4
Prupe.6G277100 Prunus persica HOM05D007481 ORTHO05D009444 6.5e-98 361.3 246 70.7
Dinv04699 Davidia involucrata HOM05D007481 ORTHO05D009444 1.5e-97 360.1 245 70.2
Gohir.D09G160700 Gossypium hirsutum HOM05D007481 ORTHO05D009444 5.5e-97 358.2 249 67.9
Manes.09G104600 Manihot esculenta HOM05D007481 ORTHO05D009444 1.6e-96 356.7 244 71.7
CSS0016102 Camellia sinensis var. sinensis HOM05D007481 ORTHO05D009444 2.7e-96 355.9 246 68.3
MD04G1152000 Malus domestica HOM05D007481 ORTHO05D009444 3.6e-96 355.5 246 70.3
CiPaw.10G156500 Carya illinoinensis HOM05D007481 ORTHO05D009444 4.7e-96 355.1 246 70.3
Actinidia11588 Actinidia chinensis HOM05D007481 ORTHO05D009444 1.4e-95 353.6 246 68.7
CANSAT35G1044 Cannabis sativa HOM05D007481 ORTHO05D009444 1.8e-95 353.2 244 70.5
FAN05G5358 Fragaria x ananassa HOM05D007481 ORTHO05D009444 1.8e-95 353.2 247 70.4
COL.COLO4_14539 Corchorus olitorius HOM05D007481 ORTHO05D009444 2.3e-95 352.8 252 66.7
HanXRQChr01g0007111 Helianthus annuus HOM05D007481 ORTHO05D009444 2.3e-95 352.8 242 71.5
Thecc.05G016400 Theobroma cacao HOM05D007481 ORTHO05D009444 5.2e-95 351.7 246 68.3
TWI74G0365 Tripterygium wilfordii HOM05D007481 ORTHO05D009444 8.8e-95 350.9 246 69.1
Potri.006G100100 Populus trichocarpa HOM05D007481 ORTHO05D009444 2.6e-94 349.4 247 68.8
PGR031G3607 Punica granatum HOM05D007481 ORTHO05D009444 2.2e-93 346.3 240 67.9
Gorai.006G182400 Gossypium raimondii HOM05D007481 ORTHO05D009444 6.3e-93 344.7 284 59.5
Aa31LG1G23100 Aethionema arabicum HOM05D007481 ORTHO05D009444 1.1e-92 344.0 248 65.7
Cc06_g01380 Coffea canephora HOM05D007481 ORTHO05D009444 1.1e-92 344.0 244 68.9
Eucgr.B02817 Eucalyptus grandis HOM05D007481 ORTHO05D009444 3.1e-92 342.4 245 68.6
Sed0020862 Sechium edule HOM05D007481 ORTHO05D009444 3.1e-92 342.4 243 69.5
Cfa017210 Carpinus fangiana HOM05D007481 ORTHO05D009444 4.1e-92 342.0 225 71.1
ECA248G3524 Erigeron canadensis HOM05D007481 ORTHO05D009444 2.0e-91 339.7 242 68.6
Nn2g13707 Nelumbo nucifera HOM05D007481 ORTHO05D009444 3.5e-91 339.0 245 66.5
GSVIVG01033961001 Vitis vinifera HOM05D007481 ORTHO05D009444 7.7e-91 337.8 246 67.1
FAN02G0465 Fragaria x ananassa HOM05D007481 ORTHO05D009444 1.3e-90 337.0 239 69.5
CAN.G616.2 Capsicum annuum HOM05D007481 ORTHO05D009444 5.0e-90 335.1 243 66.3
Ciclev10012584m.g Citrus clementina HOM05D007481 ORTHO05D009444 5.0e-90 335.1 244 67.2
Sabra06G0076900 Salix brachista HOM05D007481 ORTHO05D009444 1.9e-89 333.2 247 65.6
THA.LOC104816191 Tarenaya hassleriana HOM05D007481 ORTHO05D009444 2.5e-89 332.8 248 63.7
CsaV3_4G026270 Cucumis sativus L. HOM05D007481 ORTHO05D009444 4.2e-89 332.0 241 67.6
Aqoxy2G00902 Aquilegia oxysepala HOM05D007481 ORTHO05D009444 5.5e-89 331.6 242 64.5
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 1.2e-88 330.5 267 63.7
C02p00150 Brassica napus HOM05D007481 ORTHO05D009444 1.6e-88 330.1 247 64.8
Thhalv10014504m.g Eutrema salsugineum HOM05D007481 ORTHO05D009444 2.1e-88 329.7 243 65.4
BcaC03g13078 Brassica carinata HOM05D007481 ORTHO05D009444 3.6e-88 328.9 247 64.4
FAN14G0098 Fragaria x ananassa HOM05D007481 ORTHO05D009444 8.0e-88 327.8 307 56.7
Sp6g40760 Schrenkiella parvula HOM05D007481 ORTHO05D009444 1.0e-87 327.4 244 64.3
BolC2t06012H Brassica oleracea HOM05D007481 ORTHO05D009444 1.4e-87 327.0 247 64.0
BraA02t04685Z Brassica rapa HOM05D007481 ORTHO05D009444 1.4e-87 327.0 245 64.1
BcaB05g21923 Brassica carinata HOM05D007481 ORTHO05D009444 1.8e-87 326.6 240 65.0
Lj3A953G52 Lonicera japonica HOM05D007481 ORTHO05D009444 5.2e-87 325.1 242 65.7
Migut.L02012 Erythranthe guttata HOM05D007481 ORTHO05D009444 6.8e-87 324.7 246 64.6
AL6G10600 Arabidopsis lyrata HOM05D007481 ORTHO05D009444 8.8e-87 324.3 248 63.3
AT5G01470 Arabidopsis thaliana HOM05D007481 ORTHO05D009444 2.0e-86 323.2 252 63.5
ClCG04G007010 Citrullus lanatus HOM05D007481 ORTHO05D009444 2.0e-86 323.2 242 65.3
Solyc10g085160.2 Solanum lycopersicum HOM05D007481 ORTHO05D009444 2.0e-86 323.2 244 64.3
Sopen10g034630 Solanum pennellii HOM05D007481 ORTHO05D009444 2.0e-86 323.2 248 64.5
PGSC0003DMG400011097 Solanum tuberosum HOM05D007481 ORTHO05D009444 5.7e-86 321.6 244 63.5
MSTRG.10219 Avicennia marina HOM05D007481 ORTHO05D009444 1.3e-85 320.5 256 62.1
Carub.0006s0036 Capsella rubella HOM05D007481 ORTHO05D009444 1.3e-85 320.5 242 63.6
CARHR211840 Cardamine hirsuta HOM05D007481 ORTHO05D009444 1.3e-85 320.5 244 63.9
Peaxi162Scf00009g01813 Petunia axillaris HOM05D007481 ORTHO05D009444 1.3e-85 320.5 243 63.4
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 4.8e-85 318.5 256 60.9
Nitab4.5_0003666g0020 Nicotiana tabacum HOM05D007481 ORTHO05D009444 4.8e-85 318.5 243 65.0
Lsat_1_v5_gn_5_149561 Lactuca sativa HOM05D007481 ORTHO05D009444 1.1e-84 317.4 237 65.8
PSO801G0715 Papaver somniferum HOM05D007481 ORTHO05D009444 1.1e-84 317.4 245 61.2
Sc07g0006570 Simmondsia chinensis HOM05D007481 ORTHO05D009444 1.1e-84 317.4 243 65.4
PSO339G5056 Papaver somniferum HOM05D007481 ORTHO05D009444 1.3e-82 310.5 246 62.2
Nitab4.5_0003024g0060 Nicotiana tabacum HOM05D007481 ORTHO05D009444 2.3e-82 309.7 256 61.3
unitig_736.g22787 Utricularia gibba HOM05D007481 ORTHO05D009444 2.3e-82 309.7 233 64.8
vmacro20262 Vaccinium macrocarpon HOM05D007481 ORTHO05D009444 2.9e-82 309.3 250 62.8
FAN09G2325 Fragaria x ananassa HOM05D007481 ORTHO05D009444 1.5e-81 307.0 247 63.2
Duzib093G0021 Durio zibethinus HOM05D007481 ORTHO05D009444 7.2e-81 304.7 207 70.5
ATR0618G339 Amborella trichopoda HOM05D007481 ORTHO05D009444 4.7e-80 302.0 246 58.5
Rhsim05G0214800 Rhododendron simsii HOM05D007481 ORTHO05D009444 4.0e-79 298.9 302 51.3
Hund11009 Selenicereus undatus HOM05D007481 ORTHO05D009444 4.5e-75 285.4 266 56.8
SEGI_08492 Sequoiadendron giganteum HOM05D007481 ORTHO05D009444 3.9e-74 282.3 279 52.3
Haze_20985 Corylus avellana HOM05D007481 ORTHO05D009444 6.6e-74 281.6 246 58.1
Gohir.A09G165100 Gossypium hirsutum HOM05D007481 ORTHO05D009444 3.3e-73 279.3 193 67.4
Zm00001eb063270 Zea mays HOM05D007481 ORTHO05D009444 9.5e-73 277.7 255 54.9
Os03g0826700 Oryza sativa ssp. japonica HOM05D007481 ORTHO05D009444 1.4e-71 273.9 249 55.4
FvH4_6g11480 Fragaria vesca HOM05D007481 ORTHO05D009444 1.8e-71 273.5 188 71.8
Pp3c17_21930 Physcomitrium patens HOM05D007481 ORTHO05D009444 5.4e-68 261.9 273 50.2
Cpa.g.sc11.154 Carica papaya HOM05D007481 ORTHO05D009444 1.7e-66 256.9 246 54.9
MELO3C003292.2 Cucumis melo HOM05D007481 ORTHO05D009444 3.0e-66 256.1 177 69.5
TAR633G1799 Trochodendron aralioides HOM05D007481 ORTHO05D009444 1.1e-65 254.2 247 54.3
CDE02G3625 Ceratophyllum demersum HOM05D007481 ORTHO05D009444 1.9e-65 253.4 184 66.3
Mapoly0103s0024 Marchantia polymorpha HOM05D007481 ORTHO05D009444 1.9e-65 253.4 270 49.6
SalBow4G1731 Salvia bowleyana HOM05D007481 ORTHO05D009444 3.3e-65 252.7 183 66.7
AagrBONN_evm.TU.Sc2ySwM_228.1780 Anthoceros agrestis HOM05D007481 ORTHO05D009444 7.5e-62 241.5 215 54.9
SMO119G0350 Selaginella moellendorffii HOM05D007481 ORTHO05D009444 7.5e-62 241.5 207 56.5
VMungo0331G0457 Vigna mungo HOM05D007481 ORTHO05D009444 1.6e-56 223.8 135 80.7
CBR_g4113 Chara braunii HOM05D007481 ORTHO05D009444 6.8e-55 218.4 283 42.4
MBI14_g30737_MAGBIO Magnolia biondii HOM05D007481 ORTHO05D009444 6.8e-55 218.4 251 47.8
FAN14G2270 Fragaria x ananassa HOM05D000872 ORTHO05D000777 7.5e-54 214.9 294 45.2
DCAR_015418 Daucus carota HOM05D007481 ORTHO05D009444 4.3e-49 199.1 138 69.6
HPP92_003771 Vanilla planifolia HOM05D007481 ORTHO05D009444 5.6e-49 198.7 175 54.3
Atru.chr8.2241 Acer truncatum HOM05D007481 ORTHO05D009444 4.4e-38 162.5 115 64.3
EL10Ac5g12562 Beta vulgaris HOM05D007481 ORTHO05D009444 3.9e-26 122.9 95 65.3
Oeu006297.1 Olea europaea HOM05D007481 ORTHO05D009444 5.1e-26 122.5 87 70.1
Eucgr.B02818 Eucalyptus grandis HOM05D007481 ORTHO05D009444 3.7e-24 116.3 87 64.4
AUR62030437 Chenopodium quinoa HOM05D007481 ORTHO05D009444 1.6e-11 74.3 36 83.3


User provided reference genes

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