Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.6XKU3R Arachis hypogaea HOM05D000156 ORTHO05D014440 1.1e-42 176.4 99 100.0
arahy.Tifrunner.gnm1.ann1.Z80TVC Arachis hypogaea HOM05D000156 ORTHO05D014440 1.6e-38 162.5 99 88.9
arahy.Tifrunner.gnm1.ann1.D9LWMF Arachis hypogaea HOM05D000156 ORTHO05D014440 2.1e-38 162.2 99 88.9
arahy.Tifrunner.gnm1.ann1.DC19D2 Arachis hypogaea HOM05D000156 ORTHO05D014440 1.0e-37 159.8 106 83.0
arahy.Tifrunner.gnm1.ann1.R7R8HY Arachis hypogaea HOM05D000156 ORTHO05D014440 1.0e-37 159.8 106 88.7
arahy.Tifrunner.gnm1.ann1.77VAAJ Arachis hypogaea HOM05D000156 ORTHO05D014440 1.2e-36 156.4 106 82.1
arahy.Tifrunner.gnm1.ann1.L2VTFG Arachis hypogaea HOM05D000156 ORTHO05D014440 2.6e-36 155.2 106 81.1
arahy.Tifrunner.gnm1.ann1.262QVK Arachis hypogaea HOM05D041518 ORTHO05D014440 7.5e-36 153.7 105 80.0
arahy.Tifrunner.gnm1.ann1.7J6E5P Arachis hypogaea HOM05D000156 ORTHO05D014440 2.9e-27 125.2 93 78.5
arahy.Tifrunner.gnm1.ann1.T1YWIV Arachis hypogaea HOM05D000156 ORTHO05D014440 1.6e-17 92.8 77 72.7
arahy.Tifrunner.gnm1.ann1.4011JQ Arachis hypogaea HOM05D000156 ORTHO05D014440 1.3e-16 89.7 71 76.1
Medtr8g017570 Medicago truncatula HOM05D000156 ORTHO05D001290 1.4e-13 79.7 75 65.3
Psat4g187560 Pisum sativum HOM05D000156 ORTHO05D001290 1.4e-13 79.7 75 65.3
TPR.G3205 Trifolium pratense HOM05D000156 ORTHO05D001290 2.2e-11 72.4 74 60.8
Psat5g291920 Pisum sativum HOM05D000156 ORTHO05D001290 4.1e-10 68.2 77 66.2
Ca_01211_v3 Cicer arietinum L. HOM05D000521 ORTHO05D000384 7.1e-10 67.4 73 68.5
Lj3g0023807 Lotus japonicus HOM05D000521 ORTHO05D000384 7.1e-10 67.4 81 64.2
TPR.G6560 Trifolium pratense HOM05D000156 ORTHO05D001290 7.1e-10 67.4 75 65.3
Glyma.07G008400 Glycine max HOM05D000156 ORTHO05D001290 2.1e-09 65.9 100 48.0
Phvul.005G157700 Phaseolus vulgaris HOM05D000156 ORTHO05D001290 2.7e-09 65.5 80 63.8
QL05p010081 Quercus lobata HOM05D000156 ORTHO05D001290 3.5e-09 65.1 82 61.0
Duzib235G1491 Durio zibethinus HOM05D000156 ORTHO05D001290 4.6e-09 64.7 76 64.5
Atru.chr1.3783 Acer truncatum HOM05D000156 ORTHO05D001290 6.0e-09 64.3 77 62.3
arahy.Tifrunner.gnm1.ann1.RNX0AV Arachis hypogaea HOM05D000156 ORTHO05D001290 3.0e-08 62.0 81 59.3
Medtr2g099780 Medicago truncatula HOM05D000156 ORTHO05D001290 3.0e-08 62.0 77 63.6
Rhsim08G0235100 Rhododendron simsii HOM05D000521 ORTHO05D000384 8.6e-08 60.5 79 53.2
VMungo1080G0289 Vigna mungo HOM05D000156 ORTHO05D001290 8.6e-08 60.5 80 60.0
arahy.Tifrunner.gnm1.ann1.CJC4X3 Arachis hypogaea HOM05D000156 ORTHO05D001290 1.1e-07 60.1 75 64.0
Glyma.15G025400 Glycine max HOM05D000156 ORTHO05D001290 1.9e-07 59.3 80 58.8
arahy.Tifrunner.gnm1.ann1.ND64R3 Arachis hypogaea HOM05D000156 ORTHO05D001290 2.5e-07 58.9 75 62.7
Dinv37900 Davidia involucrata HOM05D000156 ORTHO05D001290 2.5e-07 58.9 79 53.2
Potri.003G042700 Populus trichocarpa HOM05D000156 ORTHO05D001290 2.5e-07 58.9 79 54.4
Cpa.g.sc25.70 Carica papaya HOM05D000156 ORTHO05D001290 3.3e-07 58.5 79 59.5
Hma1.2p1_0496F.1_g165910 Hydrangea macrophylla HOM05D000156 ORTHO05D001290 4.3e-07 58.2 73 64.4
CiPaw.01G223300 Carya illinoinensis HOM05D000156 ORTHO05D001290 5.6e-07 57.8 81 58.0
vmacro23047 Vaccinium macrocarpon HOM05D000156 ORTHO05D001290 5.6e-07 57.8 79 49.4
Nitab4.5_0007622g0010 Nicotiana tabacum HOM05D000156 ORTHO05D001290 7.3e-07 57.4 75 54.7
CSS0020649 Camellia sinensis var. sinensis HOM05D000156 ORTHO05D001290 9.5e-07 57.0 75 49.3
Cc04_g01760 Coffea canephora HOM05D000156 ORTHO05D001290 9.5e-07 57.0 81 53.1
Eucgr.F03144 Eucalyptus grandis HOM05D000156 ORTHO05D001290 1.2e-06 56.6 79 58.2
Manes.11G024600 Manihot esculenta HOM05D000156 ORTHO05D001290 1.2e-06 56.6 79 59.5
Ciclev10027246m.g Citrus clementina HOM05D000521 ORTHO05D000384 2.8e-06 55.5 80 51.2
Manes.04G140900 Manihot esculenta HOM05D000156 ORTHO05D001290 3.6e-06 55.1 79 58.2
Glyma.13G348400 Glycine max HOM05D000156 ORTHO05D001290 4.7e-06 54.7 77 58.4
Sabra03G0023300 Salix brachista HOM05D000156 ORTHO05D001290 4.7e-06 54.7 79 51.9
Thecc.09G056600 Theobroma cacao HOM05D000156 ORTHO05D001290 4.7e-06 54.7 75 57.3
Potri.018G062001 Populus trichocarpa HOM05D000156 ORTHO05D001290 6.2e-06 54.3 75 60.0
Zm00001eb155230 Zea mays HOM05D000156 ORTHO05D001290 6.2e-06 54.3 79 46.8
Lj5g0009584 Lotus japonicus HOM05D000156 ORTHO05D001290 8.1e-06 53.9 79 55.7
THA.LOC104803724 Tarenaya hassleriana HOM05D000156 ORTHO05D001290 8.1e-06 53.9 75 54.7


User provided reference genes

Program Settings