Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.6VP8YS Arachis hypogaea HOM05D004356 ORTHO05D005542 1.4e-156 556.2 272 100.0
arahy.Tifrunner.gnm1.ann1.L8UQBM Arachis hypogaea HOM05D004356 ORTHO05D005542 2.3e-63 246.5 279 55.2
arahy.Tifrunner.gnm1.ann1.1YQ32R Arachis hypogaea HOM05D004356 ORTHO05D005542 1.4e-60 237.3 295 52.2
arahy.Tifrunner.gnm1.ann1.X0GHYT Arachis hypogaea HOM05D004356 ORTHO05D005542 2.1e-48 196.8 248 51.6
arahy.Tifrunner.gnm1.ann1.JC6ZCB Arachis hypogaea HOM05D004356 ORTHO05D005542 5.2e-47 192.2 122 83.6
arahy.Tifrunner.gnm1.ann1.QY7301 Arachis hypogaea HOM05D004356 ORTHO05D005542 5.2e-47 192.2 122 83.6
arahy.Tifrunner.gnm1.ann1.VLAW7V Arachis hypogaea HOM05D004356 ORTHO05D005542 6.8e-47 191.8 122 83.6
Phvul.008G178500 Phaseolus vulgaris HOM05D004356 ORTHO05D005542 7.5e-46 188.3 122 82.0
VMungo0647G1889 Vigna mungo HOM05D004356 ORTHO05D005542 1.7e-45 187.2 122 81.1
arahy.Tifrunner.gnm1.ann1.3Z7WCZ Arachis hypogaea HOM05D004356 ORTHO05D005542 1.9e-44 183.7 122 80.3
Lalb_Chr10g0102631 Lupinus albus HOM05D004356 ORTHO05D005542 9.2e-44 181.4 122 79.5
TPR.G16206 Trifolium pratense HOM05D004356 ORTHO05D005542 9.2e-44 181.4 122 77.9
Glyma.02G211300 Glycine max HOM05D004356 ORTHO05D005542 1.2e-43 181.0 122 77.0
Ca_19032_v3 Cicer arietinum L. HOM05D004356 ORTHO05D005542 1.6e-43 180.6 122 77.9
Glyma.14G178900 Glycine max HOM05D004356 ORTHO05D005542 1.6e-43 180.6 122 77.0
Hund16880 Selenicereus undatus HOM05D004356 ORTHO05D005542 2.3e-42 176.8 122 74.6
TPR.G30120 Trifolium pratense HOM05D004356 ORTHO05D005542 3.0e-42 176.4 122 76.2
Psat2g068800 Pisum sativum HOM05D004356 ORTHO05D005542 3.9e-42 176.0 122 76.2
Sed0016629 Sechium edule HOM05D004356 ORTHO05D005542 6.6e-42 175.3 122 75.4
RcHm_v2.0_Chr1g0327751 Rosa chinensis HOM05D004356 ORTHO05D005542 2.5e-41 173.3 122 75.4
Medtr5g065270 Medicago truncatula HOM05D004356 ORTHO05D005542 3.3e-41 172.9 122 74.6
TWI56G1415 Tripterygium wilfordii HOM05D004356 ORTHO05D005542 3.3e-41 172.9 122 72.1
CAN.G992.8 Capsicum annuum HOM05D004356 ORTHO05D005542 4.3e-41 172.6 122 73.0
CiPaw.16G056200 Carya illinoinensis HOM05D004356 ORTHO05D005542 4.3e-41 172.6 122 72.1
Nitab4.5_0004523g0040 Nicotiana tabacum HOM05D004356 ORTHO05D005542 4.3e-41 172.6 122 73.0
CANSAT21G1617 Cannabis sativa HOM05D004356 ORTHO05D005542 5.6e-41 172.2 122 73.8
MELO3C011060.2 Cucumis melo HOM05D004356 ORTHO05D005542 5.6e-41 172.2 122 73.8
CsaV3_2G030020 Cucumis sativus L. HOM05D004356 ORTHO05D005542 5.6e-41 172.2 122 73.8
Lj1g0019049 Lotus japonicus HOM05D004356 ORTHO05D005542 5.6e-41 172.2 122 75.4
Solyc01g081300.4 Solanum lycopersicum HOM05D004356 ORTHO05D005542 5.6e-41 172.2 122 72.1
Sopen01g032880 Solanum pennellii HOM05D004356 ORTHO05D005542 5.6e-41 172.2 122 72.1
PGSC0003DMG400001802 Solanum tuberosum HOM05D004356 ORTHO05D005542 5.6e-41 172.2 122 72.1
Lj1g0006758 Lotus japonicus HOM05D004356 ORTHO05D005542 7.3e-41 171.8 122 74.6
MD00G1136500 Malus domestica HOM05D004356 ORTHO05D005542 7.3e-41 171.8 122 73.8
MD15G1379800 Malus domestica HOM05D004356 ORTHO05D005542 7.3e-41 171.8 122 74.6
RcHm_v2.0_Chr7g0237731 Rosa chinensis HOM05D004356 ORTHO05D005542 7.3e-41 171.8 122 74.6
CSS0046210 Camellia sinensis var. sinensis HOM05D004356 ORTHO05D005542 9.5e-41 171.4 122 71.3
Cc10_g15440 Coffea canephora HOM05D004356 ORTHO05D005542 9.5e-41 171.4 122 70.5
Cc10_g15470 Coffea canephora HOM05D004356 ORTHO05D005542 9.5e-41 171.4 122 69.7
Sc23g0000510 Simmondsia chinensis HOM05D004356 ORTHO05D005542 9.5e-41 171.4 122 70.5
COL.COLO4_11966 Corchorus olitorius HOM05D004356 ORTHO05D005542 2.8e-40 169.9 122 73.0
QL09p016893 Quercus lobata HOM05D004356 ORTHO05D005542 2.8e-40 169.9 122 71.3
Prupe.1G526100 Prunus persica HOM05D004356 ORTHO05D005542 4.7e-40 169.1 122 72.1
Actinidia33114 Actinidia chinensis HOM05D004356 ORTHO05D005542 6.2e-40 168.7 122 68.9
AUR62018997 Chenopodium quinoa HOM05D004356 ORTHO05D005542 6.2e-40 168.7 122 71.3
Nitab4.5_0001788g0020 Nicotiana tabacum HOM05D004356 ORTHO05D005542 6.2e-40 168.7 122 72.1
Duzib093G1902 Durio zibethinus HOM05D004356 ORTHO05D005542 8.1e-40 168.3 122 71.3
Manes.18G062300 Manihot esculenta HOM05D004356 ORTHO05D005542 1.1e-39 167.9 122 71.3
AUR62027839 Chenopodium quinoa HOM05D004356 ORTHO05D005542 1.4e-39 167.5 122 69.7
vmacro04684 Vaccinium macrocarpon HOM05D004356 ORTHO05D005542 1.4e-39 167.5 122 68.0
Rhsim07G0209000 Rhododendron simsii HOM05D004356 ORTHO05D005542 1.8e-39 167.2 122 67.2
Dinv42649 Davidia involucrata HOM05D004356 ORTHO05D005542 2.3e-39 166.8 122 70.5
TAR381G1323 Trochodendron aralioides HOM05D004356 ORTHO05D005542 2.3e-39 166.8 122 70.5
GSVIVG01009120001 Vitis vinifera HOM05D004356 ORTHO05D005542 3.1e-39 166.4 122 68.9
Cc07_g18320 Coffea canephora HOM05D004356 ORTHO05D005542 4.0e-39 166.0 122 68.0
Peaxi162Scf00592g00454 Petunia axillaris HOM05D004356 ORTHO05D005542 4.0e-39 166.0 123 69.1
Thecc.08G065800 Theobroma cacao HOM05D004356 ORTHO05D005542 5.2e-39 165.6 122 71.3
Eucgr.F00397 Eucalyptus grandis HOM05D004356 ORTHO05D005542 6.8e-39 165.2 122 71.3
FAN04G0906 Fragaria x ananassa HOM05D004356 ORTHO05D005542 6.8e-39 165.2 122 72.1
FAN08G0112 Fragaria x ananassa HOM05D004356 ORTHO05D005542 6.8e-39 165.2 122 72.1
FAN18G3440 Fragaria x ananassa HOM05D004356 ORTHO05D005542 6.8e-39 165.2 122 72.1
Ciclev10001304m.g Citrus clementina HOM05D004356 ORTHO05D005542 8.9e-39 164.9 122 70.5
Carub.0003s2101 Capsella rubella HOM05D004356 ORTHO05D005542 1.2e-38 164.5 148 59.5
Carub.0003s2106 Capsella rubella HOM05D004356 ORTHO05D005542 1.2e-38 164.5 148 59.5
Carub.0043s0008 Capsella rubella HOM05D004356 ORTHO05D005542 1.2e-38 164.5 148 59.5
Migut.M02007 Erythranthe guttata HOM05D004356 ORTHO05D005542 1.2e-38 164.5 122 67.2
PGR102G1623 Punica granatum HOM05D004356 ORTHO05D005542 1.2e-38 164.5 122 67.2
AL3G35050 Arabidopsis lyrata HOM05D004356 ORTHO05D005542 1.5e-38 164.1 148 59.5
Aqoxy1G00182 Aquilegia oxysepala HOM05D004356 ORTHO05D005542 2.6e-38 163.3 122 68.9
Aqoxy3G00172 Aquilegia oxysepala HOM05D004356 ORTHO05D005542 2.6e-38 163.3 122 68.0
Dinv44826 Davidia involucrata HOM05D004356 ORTHO05D005542 2.6e-38 163.3 122 68.9
FvH4_5g36000 Fragaria vesca HOM05D004356 ORTHO05D005542 3.4e-38 162.9 122 71.3
Ah.05g170540 Amaranthus hybridus HOM05D004356 ORTHO05D005542 4.4e-38 162.5 122 68.0
Lsat_1_v5_gn_1_2520 Lactuca sativa HOM05D004356 ORTHO05D005542 4.4e-38 162.5 122 65.6
Zm00001eb284720 Zea mays HOM05D004356 ORTHO05D005542 4.4e-38 162.5 148 60.1
ECA247G0627 Erigeron canadensis HOM05D004356 ORTHO05D005542 9.9e-38 161.4 122 65.6
Gohir.A05G222100 Gossypium hirsutum HOM05D004356 ORTHO05D005542 9.9e-38 161.4 122 69.7
Gohir.D05G224800 Gossypium hirsutum HOM05D004356 ORTHO05D005542 9.9e-38 161.4 122 69.7
Gorai.009G232200 Gossypium raimondii HOM05D004356 ORTHO05D005542 9.9e-38 161.4 122 69.7
HanXRQChr02g0040341 Helianthus annuus HOM05D004356 ORTHO05D005542 9.9e-38 161.4 122 64.8
Sp3g19060 Schrenkiella parvula HOM05D004356 ORTHO05D005542 9.9e-38 161.4 148 58.1
THA.LOC104816870 Tarenaya hassleriana HOM05D004356 ORTHO05D005542 9.9e-38 161.4 122 68.0
Atru.chr13.1064 Acer truncatum HOM05D004356 ORTHO05D005542 1.3e-37 161.0 122 70.5
Atru.chr13.1070 Acer truncatum HOM05D004356 ORTHO05D005542 1.3e-37 161.0 122 70.5
CARHR096940 Cardamine hirsuta HOM05D004356 ORTHO05D005542 1.3e-37 161.0 122 67.2
Carub.0043s0010 Capsella rubella HOM05D004356 ORTHO05D005542 2.2e-37 160.2 148 58.1
Oeu025262.1 Olea europaea HOM05D004356 ORTHO05D005542 2.2e-37 160.2 122 68.0
PSO675G5075 Papaver somniferum HOM05D004356 ORTHO05D005542 2.2e-37 160.2 148 59.5
AT3G21110 Arabidopsis thaliana HOM05D004356 ORTHO05D005542 2.9e-37 159.8 148 58.1
BraA03t13356Z Brassica rapa HOM05D004356 ORTHO05D005542 2.9e-37 159.8 148 58.1
CiPaw.16G030800 Carya illinoinensis HOM05D004356 ORTHO05D005542 2.9e-37 159.8 122 68.0
Gohir.A05G222001 Gossypium hirsutum HOM05D004356 ORTHO05D005542 2.9e-37 159.8 123 69.1
SEGI_03509 Sequoiadendron giganteum HOM05D004356 ORTHO05D005542 2.9e-37 159.8 122 68.0
Thhalv10020825m.g Eutrema salsugineum HOM05D004356 ORTHO05D005542 4.9e-37 159.1 148 58.1
PSO675G0521 Papaver somniferum HOM05D004356 ORTHO05D005542 4.9e-37 159.1 122 68.0
MSTRG.16368 Avicennia marina HOM05D004356 ORTHO05D005542 6.4e-37 158.7 122 64.8
A01p33740 Brassica napus HOM05D004356 ORTHO05D005542 8.4e-37 158.3 148 58.1
A03p42020 Brassica napus HOM05D004356 ORTHO05D005542 8.4e-37 158.3 122 66.4
C01p43120 Brassica napus HOM05D004356 ORTHO05D005542 8.4e-37 158.3 148 58.1
BolC1t04259H Brassica oleracea HOM05D004356 ORTHO05D005542 8.4e-37 158.3 148 58.1
BraA01t03487Z Brassica rapa HOM05D004356 ORTHO05D005542 8.4e-37 158.3 148 58.1
Sabra17G0038400 Salix brachista HOM05D004356 ORTHO05D005542 8.4e-37 158.3 122 67.2
Sabra17G0043000 Salix brachista HOM05D004356 ORTHO05D005542 8.4e-37 158.3 122 67.2
Aa31LG8G7830 Aethionema arabicum HOM05D004356 ORTHO05D005542 1.1e-36 157.9 122 66.4
C03p51440 Brassica napus HOM05D004356 ORTHO05D005542 1.1e-36 157.9 122 66.4
SalBow8G3481 Salvia bowleyana HOM05D004356 ORTHO05D005542 1.1e-36 157.9 122 64.8
BcaC01g03528 Brassica carinata HOM05D004356 ORTHO05D004900 1.4e-36 157.5 122 65.6
BolC3t17429H Brassica oleracea HOM05D004356 ORTHO05D005542 1.4e-36 157.5 122 65.6
CDE04G0095 Ceratophyllum demersum HOM05D004356 ORTHO05D005542 1.4e-36 157.5 148 56.1
Sabra17G0037700 Salix brachista HOM05D004356 ORTHO05D005542 1.9e-36 157.1 122 67.2
BcaB04g19136 Brassica carinata HOM05D004356 ORTHO05D005542 2.4e-36 156.8 148 56.8
Potri.017G051500 Populus trichocarpa HOM05D004356 ORTHO05D005542 2.4e-36 156.8 122 66.4
EL10Ac9g21432 Beta vulgaris HOM05D000128 ORTHO05D005542 3.2e-36 156.4 135 63.0
PSO017G1942 Papaver somniferum HOM05D004356 ORTHO05D005542 5.4e-36 155.6 122 67.2
Haze_22357 Corylus avellana HOM05D004356 ORTHO05D005542 7.1e-36 155.2 158 54.4
SGA_v2.0_scaffold175G39331 Striga asiatica HOM05D004356 ORTHO05D005542 7.1e-36 155.2 122 63.1
Os09g0467100 Oryza sativa ssp. japonica HOM05D004356 ORTHO05D005542 2.1e-35 153.7 122 67.2
AagrBONN_evm.TU.Sc2ySwM_344.5470 Anthoceros agrestis HOM05D004356 ORTHO05D005542 2.7e-35 153.3 122 64.8
Mapoly0044s0034 Marchantia polymorpha HOM05D004356 ORTHO05D005542 3.5e-35 152.9 122 63.1
ATR0022G038 Amborella trichopoda HOM05D004356 ORTHO05D005542 7.8e-35 151.8 122 65.6
HPP92_011797 Vanilla planifolia HOM05D004356 ORTHO05D005542 7.8e-35 151.8 122 65.6
unitig_37.g12048 Utricularia gibba HOM05D004356 ORTHO05D005542 1.0e-34 151.4 122 61.5
Pp3c23_9790 Physcomitrium patens HOM05D004356 ORTHO05D005542 1.3e-34 151.0 122 63.1
CSS0005507 Camellia sinensis var. sinensis HOM05D004356 ORTHO05D005542 1.7e-34 150.6 122 63.1
Actinidia29604 Actinidia chinensis HOM05D004356 ORTHO05D005542 3.9e-34 149.4 118 61.9
SHI20358 Sapria himalayana HOM05D004356 ORTHO05D005542 5.6e-33 145.6 122 61.5
CBR_g27760 Chara braunii HOM05D004356 ORTHO05D005542 7.3e-33 145.2 122 60.7
Carub.0043s0006 Capsella rubella HOM05D004356 ORTHO05D005542 1.6e-32 144.1 148 56.1
BcaB04g20611 Brassica carinata HOM05D004356 ORTHO05D005542 4.7e-32 142.5 148 53.4
SMO340G0097 Selaginella moellendorffii HOM05D004356 ORTHO05D005542 4.0e-31 139.4 122 60.7
Duzib106G0787 Durio zibethinus HOM05D004356 ORTHO05D005542 6.9e-31 138.7 107 69.2
Cfa013712 Carpinus fangiana HOM05D004356 ORTHO05D005542 4.9e-29 132.5 104 63.5
Cpa.g.sc198.38 Carica papaya HOM05D004356 ORTHO05D005542 6.4e-29 132.1 86 74.4
arahy.Tifrunner.gnm1.ann1.F88CCI Arachis hypogaea HOM05D004356 ORTHO05D005542 6.0e-27 125.6 84 75.0
arahy.Tifrunner.gnm1.ann1.HK5GW2 Arachis hypogaea HOM05D004356 ORTHO05D005542 7.8e-27 125.2 83 75.9
PRCOL_00002575 Prasinoderma coloniale HOM05D004356 ORTHO05D005542 1.0e-26 124.8 122 54.9
Lj4C732G13 Lonicera japonica HOM05D004356 ORTHO05D005542 1.5e-25 120.9 93 66.7
Cre03.g202113 Chlamydomonas reinhardtii HOM05D004356 ORTHO05D005542 1.9e-25 120.6 122 50.8
arahy.Tifrunner.gnm1.ann1.8IDC4C Arachis hypogaea HOM05D004356 ORTHO05D005542 8.1e-24 115.2 60 96.7
MCO12G379 Micromonas commoda HOM05D004356 ORTHO05D005542 2.4e-23 113.6 135 49.6
Psat0s4321g0120 Pisum sativum HOM05D004356 ORTHO05D005542 6.9e-23 112.1 92 64.1
Nn1g08498 Nelumbo nucifera HOM05D004356 ORTHO05D005542 1.1e-20 104.8 70 70.0
Carub.0516s0001 Capsella rubella HOM05D004356 ORTHO05D005542 1.6e-19 100.9 78 66.7
ClCG00G002050 Citrullus lanatus HOM05D004356 ORTHO05D005542 2.7e-19 100.1 64 75.0
arahy.Tifrunner.gnm1.ann1.H4UIY2 Arachis hypogaea HOM05D004356 ORTHO05D005542 9.6e-17 91.7 192 38.5
arahy.Tifrunner.gnm1.ann1.JXGW17 Arachis hypogaea HOM05D004356 ORTHO05D005542 9.6e-17 91.7 192 38.5
RcHm_v2.0_Chr3g0491851 Rosa chinensis HOM05D004356 ORTHO05D005542 1.6e-16 90.9 147 44.2
ClCG08G011430 Citrullus lanatus HOM05D004356 ORTHO05D005542 1.6e-11 74.3 59 67.8
Nn1g08495 Nelumbo nucifera HOM05D004356 ORTHO05D005542 4.6e-11 72.8 58 69.0


User provided reference genes

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