Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.6TA6W9 Arachis hypogaea HOM05D004589 ORTHO05D005848 2.7e-91 338.6 164 100.0
arahy.Tifrunner.gnm1.ann1.JQP3NY Arachis hypogaea HOM05D004589 ORTHO05D005848 7.7e-78 293.9 164 90.2
arahy.Tifrunner.gnm1.ann1.PKKG09 Arachis hypogaea HOM05D004589 ORTHO05D005848 2.9e-77 292.0 164 89.6
Glyma.17G215700 Glycine max HOM05D004589 ORTHO05D005848 1.8e-63 246.1 164 77.4
Phvul.001G047300 Phaseolus vulgaris HOM05D004589 ORTHO05D005848 1.8e-63 246.1 164 77.4
Lalb_Chr11g0075481 Lupinus albus HOM05D004589 ORTHO05D005848 5.3e-63 244.6 165 75.8
Lj5g0022357 Lotus japonicus HOM05D004589 ORTHO05D005848 9.1e-63 243.8 164 76.8
Glyma.14G112200 Glycine max HOM05D004589 ORTHO05D005848 2.0e-62 242.7 164 75.6
Psat6g028520 Pisum sativum HOM05D004589 ORTHO05D005848 6.5e-61 237.7 159 75.5
VMungo0647G1846 Vigna mungo HOM05D004589 ORTHO05D005848 6.5e-61 237.7 164 75.6
Ca_13043_v3 Cicer arietinum L. HOM05D004589 ORTHO05D005848 4.2e-60 235.0 159 73.0
TPR.G38909 Trifolium pratense HOM05D004589 ORTHO05D005848 7.2e-60 234.2 159 73.6
Medtr1g012980 Medicago truncatula HOM05D004589 ORTHO05D005848 2.1e-59 232.6 159 72.3
arahy.Tifrunner.gnm1.ann1.6PY749 Arachis hypogaea HOM05D004589 ORTHO05D005848 1.1e-55 220.3 164 73.2
Medtr7g069440 Medicago truncatula HOM05D004589 ORTHO05D005848 4.1e-55 218.4 157 69.4
Cfa013100 Carpinus fangiana HOM05D004589 ORTHO05D005848 8.6e-53 210.7 165 66.1
COL.COLO4_18916 Corchorus olitorius HOM05D004589 ORTHO05D005848 1.5e-52 209.9 166 65.1
Haze_21457 Corylus avellana HOM05D004589 ORTHO05D005848 1.9e-52 209.5 165 66.1
QL02p020149 Quercus lobata HOM05D004589 ORTHO05D005848 9.5e-52 207.2 164 65.2
Dinv03411 Davidia involucrata HOM05D004589 ORTHO05D005848 1.2e-51 206.8 166 64.5
RhsimUnG0052600 Rhododendron simsii HOM05D004589 ORTHO05D005848 8.0e-51 204.1 165 61.8
RhsimUnG0165300 Rhododendron simsii HOM05D004589 ORTHO05D005848 8.0e-51 204.1 165 61.8
Thecc.09G019500 Theobroma cacao HOM05D004589 ORTHO05D005848 8.0e-51 204.1 166 65.1
TWI63G0229 Tripterygium wilfordii HOM05D004589 ORTHO05D005848 1.0e-50 203.8 163 64.4
Potri.018G022500 Populus trichocarpa HOM05D004589 ORTHO05D005848 1.4e-50 203.4 164 62.8
Duzib150G1268 Durio zibethinus HOM05D004589 ORTHO05D005848 2.3e-50 202.6 166 63.9
MD15G1131100 Malus domestica HOM05D004589 ORTHO05D005848 6.8e-50 201.1 165 61.8
vmacro22576 Vaccinium macrocarpon HOM05D004589 ORTHO05D005848 8.9e-50 200.7 165 61.2
FAN27G1181 Fragaria x ananassa HOM05D004589 ORTHO05D005848 1.2e-49 200.3 165 63.0
Hma1.2p1_0167F.1_g073640 Hydrangea macrophylla HOM05D004589 ORTHO05D005848 1.5e-49 199.9 164 58.5
Prupe.1G486400 Prunus persica HOM05D004589 ORTHO05D005848 2.0e-49 199.5 165 62.4
TAR383G0934 Trochodendron aralioides HOM05D004589 ORTHO05D005848 2.6e-49 199.1 168 61.3
CSS0038938 Camellia sinensis var. sinensis HOM05D004589 ORTHO05D005848 4.4e-49 198.4 160 61.9
Ciclev10007276m.g Citrus clementina HOM05D004589 ORTHO05D005848 4.4e-49 198.4 165 61.8
FAN20G1713 Fragaria x ananassa HOM05D004589 ORTHO05D005848 4.4e-49 198.4 165 63.6
RcHm_v2.0_Chr6g0297201 Rosa chinensis HOM05D004589 ORTHO05D005848 4.4e-49 198.4 165 61.8
FvH4_2g28290 Fragaria vesca HOM05D004589 ORTHO05D005848 5.7e-49 198.0 165 63.0
FAN24G2656 Fragaria x ananassa HOM05D004589 ORTHO05D005848 5.7e-49 198.0 165 63.0
Potri.006G259500 Populus trichocarpa HOM05D004589 ORTHO05D005848 7.5e-49 197.6 164 61.6
Gohir.D06G102200 Gossypium hirsutum HOM05D004589 ORTHO05D005848 9.8e-49 197.2 166 61.4
Gorai.010G117200 Gossypium raimondii HOM05D004589 ORTHO05D005848 9.8e-49 197.2 166 61.4
Lj8A732G29 Lonicera japonica HOM05D004589 ORTHO05D005848 9.8e-49 197.2 164 62.2
Nn8g39722 Nelumbo nucifera HOM05D004589 ORTHO05D005848 2.2e-48 196.1 161 62.7
Oeu056766.2 Olea europaea HOM05D004589 ORTHO05D005848 3.7e-48 195.3 166 59.0
Actinidia23085 Actinidia chinensis HOM05D004589 ORTHO05D005848 4.9e-48 194.9 166 59.6
MSTRG.1735 Avicennia marina HOM05D004589 ORTHO05D005848 4.9e-48 194.9 166 56.6
Aqoxy7G03529 Aquilegia oxysepala HOM05D004589 ORTHO05D005848 8.3e-48 194.1 166 58.4
ECA246G2532 Erigeron canadensis HOM05D004589 ORTHO05D005848 8.3e-48 194.1 161 60.2
Gohir.A06G100000 Gossypium hirsutum HOM05D004589 ORTHO05D005848 1.4e-47 193.4 166 60.2
AUR62031571 Chenopodium quinoa HOM05D004589 ORTHO05D005848 1.8e-47 193.0 159 59.1
FAN15G2875 Fragaria x ananassa HOM05D004589 ORTHO05D005848 1.8e-47 193.0 165 61.2
Nn2g12251 Nelumbo nucifera HOM05D004589 ORTHO05D005848 2.4e-47 192.6 166 59.0
Sc23g0006530 Simmondsia chinensis HOM05D004589 ORTHO05D005848 3.1e-47 192.2 159 64.2
GSVIVG01035919001 Vitis vinifera HOM05D004589 ORTHO05D005848 3.1e-47 192.2 164 60.4
Gohir.D07G034250 Gossypium hirsutum HOM05D004589 ORTHO05D005848 1.6e-46 189.9 166 60.2
Gorai.001G035900 Gossypium raimondii HOM05D004589 ORTHO05D005848 1.6e-46 189.9 166 60.2
ECA248G0813 Erigeron canadensis HOM05D004589 ORTHO05D005848 2.0e-46 189.5 161 60.9
HanXRQChr16g0511131 Helianthus annuus HOM05D004589 ORTHO05D005848 2.0e-46 189.5 162 58.6
PSO210G3160 Papaver somniferum HOM05D004589 ORTHO05D005848 2.0e-46 189.5 166 58.4
Gohir.A07G030400 Gossypium hirsutum HOM05D004589 ORTHO05D005848 2.7e-46 189.1 166 60.2
Ah.16g104820 Amaranthus hybridus HOM05D004589 ORTHO05D005848 4.5e-46 188.3 159 58.5
Cc08_g00190 Coffea canephora HOM05D004589 ORTHO05D005848 4.5e-46 188.3 166 57.8
A10p26640 Brassica napus HOM05D004589 ORTHO05D005848 5.9e-46 188.0 159 57.9
PGR044G0530 Punica granatum HOM05D004589 ORTHO05D005848 5.9e-46 188.0 164 59.1
AUR62012448 Chenopodium quinoa HOM05D004589 ORTHO05D005848 7.8e-46 187.6 159 58.5
Thhalv10012483m.g Eutrema salsugineum HOM05D004589 ORTHO05D005848 7.8e-46 187.6 159 58.5
Hund04463 Selenicereus undatus HOM05D004589 ORTHO05D005848 7.8e-46 187.6 159 61.0
BraA10t44722Z Brassica rapa HOM05D004589 ORTHO05D005848 2.3e-45 186.0 159 57.2
CARHR202250 Cardamine hirsuta HOM05D004589 ORTHO05D005848 2.9e-45 185.7 159 57.2
Sp6g32450 Schrenkiella parvula HOM05D004589 ORTHO05D005848 6.6e-45 184.5 159 57.9
Aa31LG3G16090 Aethionema arabicum HOM05D004589 ORTHO05D005848 8.6e-45 184.1 159 57.9
BcaC04g19264 Brassica carinata HOM05D004589 ORTHO05D005848 1.5e-44 183.3 159 56.6
Manes.16G126200 Manihot esculenta HOM05D004589 ORTHO05D005848 1.5e-44 183.3 164 56.1
EL10Ac2g04152 Beta vulgaris HOM05D004589 ORTHO05D005848 1.9e-44 183.0 159 56.6
C09p65810 Brassica napus HOM05D004589 ORTHO05D005848 1.9e-44 183.0 159 56.6
BolC9t59402H Brassica oleracea HOM05D004589 ORTHO05D005848 1.9e-44 183.0 159 56.6
AL6G21660 Arabidopsis lyrata HOM05D004589 ORTHO05D005848 2.5e-44 182.6 159 57.9
ClCG05G016580 Citrullus lanatus HOM05D004589 ORTHO05D005848 2.5e-44 182.6 164 56.7
Migut.E01823 Erythranthe guttata HOM05D004589 ORTHO05D005848 2.5e-44 182.6 166 53.0
Lsat_1_v5_gn_6_115440 Lactuca sativa HOM05D004589 ORTHO05D005848 2.5e-44 182.6 158 55.7
CANSAT11G1771 Cannabis sativa HOM05D004589 ORTHO05D005848 3.3e-44 182.2 159 59.1
Nitab4.5_0003811g0060 Nicotiana tabacum HOM05D004589 ORTHO05D005848 4.3e-44 181.8 163 57.1
Peaxi162Scf00430g00220 Petunia axillaris HOM05D004589 ORTHO05D005848 4.3e-44 181.8 163 57.7
Sed0004204 Sechium edule HOM05D004589 ORTHO05D005848 4.3e-44 181.8 164 56.1
AT5G11040 Arabidopsis thaliana HOM05D004589 ORTHO05D005848 5.6e-44 181.4 159 57.9
Carub.0006s0955 Capsella rubella HOM05D004589 ORTHO05D005848 5.6e-44 181.4 159 57.2
Eucgr.C02726 Eucalyptus grandis HOM05D004589 ORTHO05D005848 5.6e-44 181.4 166 58.4
Nitab4.5_0002503g0050 Nicotiana tabacum HOM05D004589 ORTHO05D005848 7.3e-44 181.0 163 56.4
MELO3C016987.2 Cucumis melo HOM05D004589 ORTHO05D005848 9.5e-44 180.6 164 55.5
THA.LOC104799036 Tarenaya hassleriana HOM05D004589 ORTHO05D005848 1.6e-43 179.9 159 57.2
Solyc06g065840.3 Solanum lycopersicum HOM05D004589 ORTHO05D005848 2.8e-43 179.1 163 57.1
CDE05G2463 Ceratophyllum demersum HOM05D004589 ORTHO05D005848 3.6e-43 178.7 168 54.8
CAN.G199.72 Capsicum annuum HOM05D004589 ORTHO05D005848 1.0e-42 177.2 165 55.2
Sopen06g024330 Solanum pennellii HOM05D004589 ORTHO05D005848 1.4e-42 176.8 163 56.4
unitig_32.g11113 Utricularia gibba HOM05D004589 ORTHO05D005848 1.4e-42 176.8 164 54.9
CsaV3_4G036860 Cucumis sativus L. HOM05D004589 ORTHO05D005848 2.3e-42 176.0 164 54.3
HanXRQChr01g0030641 Helianthus annuus HOM05D004589 ORTHO05D005848 1.2e-41 173.7 160 55.6
Zm00001eb078140 Zea mays HOM05D004589 ORTHO05D005848 1.2e-41 173.7 164 53.7
SGA_v2.0_scaffold85G26586 Striga asiatica HOM05D004589 ORTHO05D005848 7.5e-41 171.0 164 53.7
Os04g0502200 Oryza sativa ssp. japonica HOM05D004589 ORTHO05D005848 9.8e-41 170.6 173 53.8
ATR0629G049 Amborella trichopoda HOM05D004589 ORTHO05D005848 3.7e-40 168.7 173 50.3
DCAR_021911 Daucus carota HOM05D004589 ORTHO05D005848 1.2e-38 163.7 140 59.3
Cpa.g.sc187.28 Carica papaya HOM05D004589 ORTHO05D005848 3.3e-36 155.6 117 65.0
Lsat_1_v5_gn_1_43861 Lactuca sativa HOM05D004589 ORTHO05D005848 8.3e-32 141.0 160 51.2
HPP92_024788 Vanilla planifolia HOM05D004589 ORTHO05D005848 1.1e-31 140.6 164 43.3
TWI34G0107 Tripterygium wilfordii HOM05D004589 ORTHO05D005848 1.7e-29 133.3 163 50.3
Mapoly0001s0490 Marchantia polymorpha HOM05D004589 ORTHO05D005848 5.2e-26 121.7 178 38.8
CiPaw.08G008300 Carya illinoinensis HOM05D004589 ORTHO05D005848 1.5e-25 120.2 91 67.0
AagrBONN_evm.TU.Sc2ySwM_368.2742 Anthoceros agrestis HOM05D004589 ORTHO05D005848 6.4e-24 114.8 154 40.9
CSS0039966 Camellia sinensis var. sinensis HOM05D004589 ORTHO05D005848 4.3e-20 102.1 92 57.6
Pp3c22_21520 Physcomitrium patens HOM05D004589 ORTHO05D005848 9.5e-20 100.9 152 38.8
Pp3c19_10170 Physcomitrium patens HOM05D004589 ORTHO05D005848 1.2e-19 100.5 150 36.7
SMO364G0672 Selaginella moellendorffii HOM05D004589 ORTHO05D005848 7.6e-17 91.3 135 36.3
HPP92_020311 Vanilla planifolia HOM05D004589 ORTHO05D005848 4.2e-15 85.5 85 45.9
Atru.chr7.2501 Acer truncatum HOM05D004589 ORTHO05D005848 2.3e-13 79.7 58 65.5
SEGI_40067 Sequoiadendron giganteum HOM05D004589 ORTHO05D005848 5.1e-13 78.6 69 58.0
CBR_g36903 Chara braunii HOM05D004589 ORTHO05D005848 4.3e-12 75.5 97 42.3
SMO199G0047 Selaginella moellendorffii HOM05D004589 ORTHO05D005848 1.2e-11 73.9 129 37.2
Atru.chr7.2502 Acer truncatum HOM05D004589 ORTHO05D005848 8.4e-08 61.2 62 58.1
Zm00001eb426010 Zea mays HOM05D004589 ORTHO05D005848 2.1e-06 56.6 76 42.1


User provided reference genes

Program Settings