Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.6T6LBL Arachis hypogaea HOM05D007102 ORTHO05D008950 2.0e-132 475.7 225 100.0
arahy.Tifrunner.gnm1.ann1.S4JT24 Arachis hypogaea HOM05D007102 ORTHO05D008950 4.4e-92 341.7 225 77.8
Lj6g0026798 Lotus japonicus HOM05D007102 ORTHO05D008950 5.4e-90 334.7 218 78.0
Glyma.11G201200 Glycine max HOM05D007102 ORTHO05D008950 3.5e-89 332.0 239 71.5
Medtr3g062890 Medicago truncatula HOM05D007102 ORTHO05D008950 1.3e-88 330.1 226 73.5
Glyma.18G049600 Glycine max HOM05D007102 ORTHO05D008950 1.7e-88 329.7 242 71.5
Psat5g145240 Pisum sativum HOM05D007102 ORTHO05D008950 3.6e-86 322.0 221 74.2
Lalb_Chr20g0117241 Lupinus albus HOM05D007102 ORTHO05D008950 4.7e-86 321.6 237 72.2
Gohir.D13G017200 Gossypium hirsutum HOM05D007102 ORTHO05D008950 1.4e-82 310.1 175 84.0
Phvul.006G081700 Phaseolus vulgaris HOM05D007102 ORTHO05D008950 2.4e-82 309.3 230 70.0
TPR.G13817 Trifolium pratense HOM05D007102 ORTHO05D008950 2.4e-82 309.3 220 72.7
Gorai.013G019100 Gossypium raimondii HOM05D007102 ORTHO05D008950 4.1e-82 308.5 174 83.9
Thecc.09G366000 Theobroma cacao HOM05D007102 ORTHO05D008950 4.1e-82 308.5 172 86.6
VMungo0540G2371 Vigna mungo HOM05D007102 ORTHO05D008950 2.7e-81 305.8 229 68.1
Haze_24461 Corylus avellana HOM05D007102 ORTHO05D008950 3.5e-81 305.4 215 72.6
Manes.18G123900 Manihot esculenta HOM05D007102 ORTHO05D008950 6.0e-81 304.7 224 70.1
Prupe.6G038400 Prunus persica HOM05D007102 ORTHO05D008950 1.0e-80 303.9 197 76.6
MD11G1049700 Malus domestica HOM05D007102 ORTHO05D008950 1.3e-80 303.5 198 76.3
Cfa011824 Carpinus fangiana HOM05D007102 ORTHO05D008950 1.7e-80 303.1 215 72.6
Duzib168G2173 Durio zibethinus HOM05D007102 ORTHO05D008950 3.9e-80 302.0 172 84.3
MD03G1047200 Malus domestica HOM05D007102 ORTHO05D008950 3.9e-80 302.0 186 79.6
Ca_15087_v3 Cicer arietinum L. HOM05D007102 ORTHO05D008950 5.1e-80 301.6 173 82.7
Eucgr.J01847 Eucalyptus grandis HOM05D007102 ORTHO05D008950 8.6e-80 300.8 173 83.8
GSVIVG01024526001 Vitis vinifera HOM05D007102 ORTHO05D008950 8.6e-80 300.8 174 82.8
TWI31G0907 Tripterygium wilfordii HOM05D007102 ORTHO05D008950 1.5e-79 300.1 180 81.7
CANSAT54G0300 Cannabis sativa HOM05D007102 ORTHO05D008950 1.9e-79 299.7 201 76.1
CAN.G749.40 Capsicum annuum HOM05D007102 ORTHO05D008950 1.9e-79 299.7 187 78.1
Cc01_g08950 Coffea canephora HOM05D007102 ORTHO05D008950 3.3e-79 298.9 185 79.5
Potri.013G160600 Populus trichocarpa HOM05D007102 ORTHO05D008950 3.3e-79 298.9 170 84.1
MELO3C019595.2 Cucumis melo HOM05D007102 ORTHO05D008950 9.5e-79 297.4 159 89.9
CsaV3_6G013250 Cucumis sativus L. HOM05D007102 ORTHO05D008950 9.5e-79 297.4 159 89.9
Peaxi162Scf00788g00047 Petunia axillaris HOM05D007102 ORTHO05D008950 9.5e-79 297.4 184 80.4
QL01p023619 Quercus lobata HOM05D007102 ORTHO05D008950 2.1e-78 296.2 185 79.5
Nitab4.5_0001856g0010 Nicotiana tabacum HOM05D007102 ORTHO05D008950 2.8e-78 295.8 187 78.6
CiPaw.13G061600 Carya illinoinensis HOM05D007102 ORTHO05D008950 3.6e-78 295.4 169 84.0
Ciclev10002429m.g Citrus clementina HOM05D007102 ORTHO05D008950 3.6e-78 295.4 214 70.1
FvH4_3g41140 Fragaria vesca HOM05D007102 ORTHO05D008950 3.6e-78 295.4 190 76.3
Hma1.2p1_0170F.1_g075400 Hydrangea macrophylla HOM05D007102 ORTHO05D008950 4.7e-78 295.0 172 83.1
Dinv12295 Davidia involucrata HOM05D007102 ORTHO05D008950 6.2e-78 294.7 204 72.5
AUR62019027 Chenopodium quinoa HOM05D007102 ORTHO05D008950 8.1e-78 294.3 238 63.9
FAN16G1418 Fragaria x ananassa HOM05D007102 ORTHO05D008950 8.1e-78 294.3 190 75.8
FAN21G1718 Fragaria x ananassa HOM05D007102 ORTHO05D008950 8.1e-78 294.3 190 75.8
RcHm_v2.0_Chr5g0073911 Rosa chinensis HOM05D007102 ORTHO05D008950 1.4e-77 293.5 187 77.5
PGR042G3056 Punica granatum HOM05D007102 ORTHO05D008950 1.8e-77 293.1 173 79.8
Sabra13G0128500 Salix brachista HOM05D007102 ORTHO05D008950 1.8e-77 293.1 185 76.8
CSS0027114 Camellia sinensis var. sinensis HOM05D007102 ORTHO05D008950 3.1e-77 292.4 164 84.8
FAN25G2933 Fragaria x ananassa HOM05D007102 ORTHO05D008950 3.1e-77 292.4 188 76.1
AUR62027864 Chenopodium quinoa HOM05D007102 ORTHO05D008950 4.0e-77 292.0 189 74.6
Sopen09g032040 Solanum pennellii HOM05D007102 ORTHO05D008950 4.0e-77 292.0 162 85.2
PGSC0003DMG400006084 Solanum tuberosum HOM05D007102 ORTHO05D008950 4.0e-77 292.0 182 76.4
Actinidia23827 Actinidia chinensis HOM05D007102 ORTHO05D008950 5.2e-77 291.6 162 85.2
PSO384G1696 Papaver somniferum HOM05D007102 ORTHO05D008950 8.9e-77 290.8 180 78.3
Lj2C1106T0 Lonicera japonica HOM05D007102 ORTHO05D008950 1.2e-76 290.4 184 78.8
PSO266G0014 Papaver somniferum HOM05D007102 ORTHO05D008950 1.2e-76 290.4 178 78.7
Solyc09g083150.4 Solanum lycopersicum HOM05D007102 ORTHO05D008950 1.5e-76 290.0 178 78.1
EL10Ac1g01074 Beta vulgaris HOM05D007102 ORTHO05D008950 2.0e-76 289.7 188 72.9
CDE07G1209 Ceratophyllum demersum HOM05D007102 ORTHO05D008950 2.0e-76 289.7 166 82.5
THA.LOC104819153 Tarenaya hassleriana HOM05D007102 ORTHO05D008950 3.4e-76 288.9 173 78.6
Nn2g10214 Nelumbo nucifera HOM05D007102 ORTHO05D008950 5.8e-76 288.1 162 82.1
Aqoxy5G01440 Aquilegia oxysepala HOM05D007102 ORTHO05D008950 7.6e-76 287.7 162 83.3
Migut.D00799 Erythranthe guttata HOM05D007102 ORTHO05D008950 7.6e-76 287.7 173 78.6
HanXRQChr16g0508431 Helianthus annuus HOM05D007102 ORTHO05D008950 7.6e-76 287.7 172 80.2
Rhsim01G0245100 Rhododendron simsii HOM05D007102 ORTHO05D008950 9.9e-76 287.3 192 73.4
vmacro14656 Vaccinium macrocarpon HOM05D007102 ORTHO05D008950 9.9e-76 287.3 192 74.5
ECA236G5009 Erigeron canadensis HOM05D007102 ORTHO05D008950 1.3e-75 287.0 172 80.8
Lsat_1_v5_gn_8_99200 Lactuca sativa HOM05D007102 ORTHO05D008950 1.3e-75 287.0 172 80.2
MSTRG.21273 Avicennia marina HOM05D007102 ORTHO05D008950 1.7e-75 286.6 164 81.7
AL8G34360 Arabidopsis lyrata HOM05D007102 ORTHO05D008950 1.1e-74 283.9 173 76.9
AT5G58260 Arabidopsis thaliana HOM05D007102 ORTHO05D008950 1.4e-74 283.5 173 76.9
BcaB01g04483 Brassica carinata HOM05D007102 ORTHO05D008950 1.4e-74 283.5 173 76.3
CARHR272050 Cardamine hirsuta HOM05D007102 ORTHO05D008950 1.9e-74 283.1 171 77.8
A03p12340 Brassica napus HOM05D007102 ORTHO05D008950 2.4e-74 282.7 173 76.3
C03p14490 Brassica napus HOM05D007102 ORTHO05D008950 2.4e-74 282.7 173 76.3
BraA03t10546Z Brassica rapa HOM05D007102 ORTHO05D008950 2.4e-74 282.7 173 76.3
Sp6g19920 Schrenkiella parvula HOM05D007102 ORTHO05D008950 2.4e-74 282.7 173 76.3
Carub.0008s1880 Capsella rubella HOM05D007102 ORTHO05D008950 3.2e-74 282.3 173 76.3
TAR624G0943 Trochodendron aralioides HOM05D007102 ORTHO05D008950 4.1e-74 282.0 180 75.6
BcaB01g04537 Brassica carinata HOM05D007102 ORTHO05D008950 7.1e-74 281.2 173 76.3
BcaB01g04546 Brassica carinata HOM05D007102 ORTHO05D008950 7.1e-74 281.2 173 76.3
BolC3t13892H Brassica oleracea HOM05D007102 ORTHO05D008950 7.1e-74 281.2 173 76.3
unitig_0.g217 Utricularia gibba HOM05D007102 ORTHO05D008950 7.1e-74 281.2 172 77.3
Ah.05g170720 Amaranthus hybridus HOM05D007102 ORTHO05D008950 2.1e-73 279.6 159 82.4
DCAR_021104 Daucus carota HOM05D007102 ORTHO05D008950 6.0e-73 278.1 173 76.9
Os01g0882500 Oryza sativa ssp. japonica HOM05D007102 ORTHO05D008950 4.3e-71 271.9 177 71.8
Sed0015928 Sechium edule HOM05D007102 ORTHO05D008950 1.2e-70 270.4 155 85.8
Zm00001eb145680 Zea mays HOM05D007102 ORTHO05D008950 1.6e-70 270.0 190 70.0
Atru.chr10.2354 Acer truncatum HOM05D007102 ORTHO05D008950 4.7e-70 268.5 165 81.2
Hund16865 Selenicereus undatus HOM05D007102 ORTHO05D008950 4.7e-70 268.5 168 76.2
MBI15_g05591_MAGBIO Magnolia biondii HOM05D007102 ORTHO05D008950 1.4e-69 266.9 217 64.5
ClCG02G018940 Citrullus lanatus HOM05D007102 ORTHO05D008950 8.9e-69 264.2 170 78.2
Cpa.g.sc2.262 Carica papaya HOM05D007102 ORTHO05D008950 4.4e-68 261.9 154 81.2
Nitab4.5_0007585g0040 Nicotiana tabacum HOM05D007102 ORTHO05D008950 2.9e-67 259.2 161 78.3
Oeu005352.1 Olea europaea HOM05D007102 ORTHO05D008950 3.5e-65 252.3 172 73.3
ATR1127G111 Amborella trichopoda HOM05D007102 ORTHO05D008950 1.3e-64 250.4 143 83.2
Mapoly0073s0080 Marchantia polymorpha HOM05D007102 ORTHO05D008950 1.4e-61 240.4 186 64.0
Pp3c3_15360 Physcomitrium patens HOM05D007102 ORTHO05D008950 6.9e-61 238.0 163 65.0
Gohir.A13G016100 Gossypium hirsutum HOM05D007102 ORTHO05D008950 2.6e-60 236.1 143 79.7
COL.COLO4_11231 Corchorus olitorius HOM05D007102 ORTHO05D008950 7.4e-55 218.0 138 76.8
SMO119G0373 Selaginella moellendorffii HOM05D007102 ORTHO05D008950 4.0e-53 212.2 155 62.6
Aa31LG11G50 Aethionema arabicum HOM05D007102 ORTHO05D008950 5.8e-52 208.4 134 73.9
FAN11G2493 Fragaria x ananassa HOM05D007102 ORTHO05D008950 9.9e-52 207.6 184 59.8
Hma1.2p1_0170F.1_g075390 Hydrangea macrophylla HOM05D007102 ORTHO05D008950 1.7e-51 206.8 126 80.2
Actinidia34510 Actinidia chinensis HOM05D007102 ORTHO05D008950 3.0e-48 196.1 110 83.6
SEGI_29953 Sequoiadendron giganteum HOM05D007102 ORTHO05D008950 2.7e-41 172.9 116 68.1
Pp3c10_12660 Physcomitrium patens HOM05D007102 ORTHO05D008950 7.4e-39 164.9 130 59.2
CBR_g36846 Chara braunii HOM05D007102 ORTHO05D008950 1.8e-32 143.7 174 44.8
Thhalv10014691m.g Eutrema salsugineum HOM05D007102 ORTHO05D008950 3.1e-29 132.9 83 72.3
Haze_24494 Corylus avellana HOM05D007102 ORTHO05D008950 5.7e-23 112.1 218 39.4
CiPaw.13G061300 Carya illinoinensis HOM05D007102 ORTHO05D008950 5.7e-15 85.5 43 88.4
SEGI_39426 Sequoiadendron giganteum HOM05D007102 ORTHO05D008950 3.7e-14 82.8 47 76.6


User provided reference genes

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