Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.6T17AW Arachis hypogaea HOM05D007191 ORTHO05D009370 1.4e-184 649.4 325 100.0
arahy.Tifrunner.gnm1.ann1.DV4H7C Arachis hypogaea HOM05D007191 ORTHO05D009370 2.8e-172 608.6 353 89.2
Medtr8g068220 Medicago truncatula HOM05D007191 ORTHO05D009370 2.7e-122 442.6 348 69.3
Ca_22623_v3 Cicer arietinum L. HOM05D007191 ORTHO05D009370 7.5e-117 424.5 327 69.4
Lalb_Chr16g0392111 Lupinus albus HOM05D007191 ORTHO05D009370 4.8e-116 421.8 350 66.0
TPR.G29816 Trifolium pratense HOM05D007191 ORTHO05D009370 6.3e-116 421.4 349 65.3
Glyma.08G276900 Glycine max HOM05D007191 ORTHO05D009370 1.6e-114 416.8 284 74.6
Lj4g0026970 Lotus japonicus HOM05D007191 ORTHO05D009370 2.7e-114 416.0 349 67.3
VMungo0251G2065 Vigna mungo HOM05D007191 ORTHO05D009370 1.0e-113 414.1 300 70.7
Psat4g117600 Pisum sativum HOM05D007191 ORTHO05D009370 1.3e-113 413.7 348 64.1
Phvul.003G287700 Phaseolus vulgaris HOM05D007191 ORTHO05D009370 1.6e-111 406.8 287 73.2
QL06p036361 Quercus lobata HOM05D007191 ORTHO05D009370 1.5e-101 373.6 282 67.0
GSVIVG01003951001 Vitis vinifera HOM05D007191 ORTHO05D003232 2.7e-98 362.8 284 66.2
Dinv13563 Davidia involucrata HOM05D007191 ORTHO05D009370 1.3e-97 360.5 332 58.4
Thecc.01G088100 Theobroma cacao HOM05D007191 ORTHO05D009370 2.3e-97 359.8 284 63.4
Dinv36956 Davidia involucrata HOM05D007191 ORTHO05D009370 3.3e-96 355.9 284 64.8
CiPaw.07G045700 Carya illinoinensis HOM05D007191 ORTHO05D009370 7.3e-96 354.8 280 63.9
Atru.chr3.1215 Acer truncatum HOM05D007191 ORTHO05D009370 6.2e-95 351.7 351 55.6
CSS0046556 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 8.0e-95 351.3 284 63.7
Duzib147G1243 Durio zibethinus HOM05D007191 ORTHO05D009370 1.4e-94 350.5 284 63.0
Actinidia25299 Actinidia chinensis HOM05D007191 ORTHO05D009370 6.8e-94 348.2 283 63.3
COL.COLO4_27378 Corchorus olitorius HOM05D007191 ORTHO05D009370 4.4e-93 345.5 282 62.8
Manes.13G101800 Manihot esculenta HOM05D007191 ORTHO05D009370 5.8e-93 345.1 331 56.8
ClCG10G008240 Citrullus lanatus HOM05D007191 ORTHO05D009370 2.9e-92 342.8 282 64.2
vmacro13023 Vaccinium macrocarpon HOM05D007191 ORTHO05D009370 2.9e-92 342.8 288 62.8
Manes.13G092280 Manihot esculenta HOM05D007191 ORTHO05D009370 3.7e-92 342.4 331 55.9
CsaV3_3G006990 Cucumis sativus L. HOM05D007191 ORTHO05D009370 4.9e-92 342.0 281 63.3
Prupe.6G204900 Prunus persica HOM05D007191 ORTHO05D009370 4.9e-92 342.0 282 62.8
TWI74G0882 Tripterygium wilfordii HOM05D007191 ORTHO05D009370 8.3e-92 341.3 299 59.9
Gohir.A11G207400 Gossypium hirsutum HOM05D007191 ORTHO05D009370 1.9e-91 340.1 284 60.9
Cpa.g.sc55.6 Carica papaya HOM05D007191 ORTHO05D009370 3.2e-91 339.3 281 63.3
Nitab4.5_0000402g0060 Nicotiana tabacum HOM05D007191 ORTHO05D009370 2.0e-90 336.7 282 62.1
MELO3C014951.2 Cucumis melo HOM05D007191 ORTHO05D009370 2.7e-90 336.3 281 63.0
MD01G1041100 Malus domestica HOM05D007191 ORTHO05D009370 2.7e-90 336.3 282 62.4
CANSAT01G2982 Cannabis sativa HOM05D007191 ORTHO05D009370 3.5e-90 335.9 284 60.9
Gorai.007G232000 Gossypium raimondii HOM05D007191 ORTHO05D009370 3.5e-90 335.9 284 60.6
Gohir.D11G215700 Gossypium hirsutum HOM05D007191 ORTHO05D009370 7.8e-90 334.7 284 60.6
Lsat_1_v5_gn_4_142441 Lactuca sativa HOM05D007191 ORTHO05D009370 1.7e-89 333.6 283 59.7
Ciclev10025907m.g Citrus clementina HOM05D007191 ORTHO05D009370 3.9e-89 332.4 282 61.3
Potri.005G147600 Populus trichocarpa HOM05D007191 ORTHO05D009370 6.6e-89 331.6 287 59.9
THA.LOC104804178 Tarenaya hassleriana HOM05D007191 ORTHO05D009370 1.1e-88 330.9 283 60.4
FvH4_1g19321 Fragaria vesca HOM05D007191 ORTHO05D009370 1.5e-88 330.5 321 56.7
Haze_03901 Corylus avellana HOM05D007191 ORTHO05D009370 2.5e-88 329.7 409 49.1
Sopen11g005640 Solanum pennellii HOM05D007191 ORTHO05D009370 4.3e-88 328.9 282 60.6
Solyc11g010900.2 Solanum lycopersicum HOM05D007191 ORTHO05D009370 7.3e-88 328.2 282 59.9
Peaxi162Scf00085g00523 Petunia axillaris HOM05D007191 ORTHO05D009370 9.5e-88 327.8 284 60.9
Thhalv10025567m.g Eutrema salsugineum HOM05D007191 ORTHO05D009370 1.6e-87 327.0 283 60.8
BcaNung05371 Brassica carinata HOM05D007191 ORTHO05D009370 2.8e-87 326.2 281 59.1
RcHm_v2.0_Chr2g0110691 Rosa chinensis HOM05D007191 ORTHO05D003232 2.8e-87 326.2 284 60.2
Sabra05G0118000 Salix brachista HOM05D007191 ORTHO05D009370 1.1e-86 324.3 288 59.7
CDE04G1458 Ceratophyllum demersum HOM05D007191 ORTHO05D009370 1.8e-86 323.6 295 56.9
HanXRQChr09g0259541 Helianthus annuus HOM05D007191 ORTHO05D009370 3.1e-86 322.8 281 59.8
BcaNung00953 Brassica carinata HOM05D007191 ORTHO05D009370 5.2e-86 322.0 280 58.9
MBI16_g30311_MAGBIO Magnolia biondii HOM05D007191 ORTHO05D009370 6.8e-86 321.6 280 61.4
FAN19G2137 Fragaria x ananassa HOM05D007191 ORTHO05D000122 1.5e-85 320.5 320 55.6
A01p01070 Brassica napus HOM05D007191 ORTHO05D009370 2.0e-85 320.1 281 59.8
BraA01t00105Z Brassica rapa HOM05D007191 ORTHO05D009370 2.0e-85 320.1 281 59.8
C01p01190 Brassica napus HOM05D007191 ORTHO05D009370 3.4e-85 319.3 346 51.2
AT4G38020 Arabidopsis thaliana HOM05D007191 ORTHO05D009370 4.4e-85 318.9 353 51.8
FAN19G0835 Fragaria x ananassa HOM05D007191 ORTHO05D000122 4.4e-85 318.9 320 55.6
BolC1t00117H Brassica oleracea HOM05D007191 ORTHO05D009370 5.8e-85 318.5 342 50.9
Aqoxy6G01485 Aquilegia oxysepala HOM05D007191 ORTHO05D009370 1.3e-84 317.4 287 56.1
Eucgr.H02435 Eucalyptus grandis HOM05D007191 ORTHO05D009370 1.7e-84 317.0 281 59.4
CARHR246430 Cardamine hirsuta HOM05D007191 ORTHO05D009370 2.2e-84 316.6 283 60.1
AUR62003688 Chenopodium quinoa HOM05D007191 ORTHO05D009370 2.2e-84 316.6 283 57.6
Sp7g35660 Schrenkiella parvula HOM05D007191 ORTHO05D009370 2.9e-84 316.2 351 51.0
AL7G12620 Arabidopsis lyrata HOM05D007191 ORTHO05D009370 4.9e-84 315.5 353 51.6
Carub.0007s0220 Capsella rubella HOM05D007191 ORTHO05D009370 4.9e-84 315.5 354 51.7
PSO675G0552 Papaver somniferum HOM05D007191 ORTHO05D009370 8.3e-84 314.7 282 56.7
Cfa006863 Carpinus fangiana HOM05D007191 ORTHO05D000122 1.4e-83 313.9 370 51.1
AUR62018000 Chenopodium quinoa HOM05D007191 ORTHO05D009370 5.4e-83 312.0 283 56.2
Oeu017115.1 Olea europaea HOM05D007191 ORTHO05D009370 3.5e-82 309.3 324 52.2
Sed0016887 Sechium edule HOM05D007191 ORTHO05D009370 3.5e-82 309.3 271 61.3
Lj2A526T20 Lonicera japonica HOM05D007191 ORTHO05D009370 1.3e-81 307.4 330 53.9
MSTRG.23388 Avicennia marina HOM05D007191 ORTHO05D009370 2.5e-80 303.1 284 53.9
PSO541G2681 Papaver somniferum HOM05D007191 ORTHO05D009370 2.5e-80 303.1 282 55.3
Migut.H02278 Erythranthe guttata HOM05D007191 ORTHO05D009370 4.7e-79 298.9 288 54.9
Aa31LG6G14960 Aethionema arabicum HOM05D007191 ORTHO05D009370 2.3e-78 296.6 307 52.8
Ah.03g143260 Amaranthus hybridus HOM05D007191 ORTHO05D009370 4.0e-78 295.8 283 55.8
Nitab4.5_0005446g0010 Nicotiana tabacum HOM05D007191 ORTHO05D009370 2.0e-77 293.5 282 57.1
SalBow3G4077 Salvia bowleyana HOM05D007191 ORTHO05D009370 5.8e-77 292.0 303 53.1
Nn5g29827 Nelumbo nucifera HOM05D007191 ORTHO05D009370 2.9e-76 289.7 271 57.2
Sc03g0000490 Simmondsia chinensis HOM05D007191 ORTHO05D009370 1.9e-72 276.9 275 53.8
SGA_v2.0_scaffold108G30936 Striga asiatica HOM05D007191 ORTHO05D009370 3.1e-70 269.6 267 50.9
CAN.G1771.10 Capsicum annuum HOM05D007191 ORTHO05D009370 5.2e-70 268.9 248 56.9
DCAR_003441 Daucus carota HOM05D007191 ORTHO05D003232 5.2e-70 268.9 246 57.3
Os03g0685100 Oryza sativa ssp. japonica HOM05D007191 ORTHO05D009370 5.2e-70 268.9 282 52.5
HPP92_014152 Vanilla planifolia HOM05D007191 ORTHO05D009370 1.7e-68 263.8 271 54.2
unitig_27.g25347 Utricularia gibba HOM05D007191 ORTHO05D009370 7.1e-67 258.5 267 52.1
HPP92_014172 Vanilla planifolia HOM05D007191 ORTHO05D009370 6.0e-66 255.4 281 52.0
ECA232G3284 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.5e-64 250.0 221 57.0
Zm00001eb053350 Zea mays HOM05D007191 ORTHO05D009370 2.6e-61 240.0 265 49.1
Pp3c5_6200 Physcomitrium patens HOM05D007191 ORTHO05D009370 2.9e-60 236.5 287 45.6
PGSC0003DMG400016118 Solanum tuberosum HOM05D007191 ORTHO05D009370 1.3e-57 227.6 200 58.5
SMO364G0498 Selaginella moellendorffii HOM05D007191 ORTHO05D009370 1.9e-51 207.2 294 39.1
AUR62043608 Chenopodium quinoa HOM05D007191 ORTHO05D009370 1.6e-50 204.1 143 66.4
CBR_g31860 Chara braunii HOM05D000601 ORTHO05D000407 3.9e-49 199.5 286 40.2
Mapoly0036s0111 Marchantia polymorpha HOM05D007191 ORTHO05D009370 8.1e-47 191.8 314 38.5
AUR62014153 Chenopodium quinoa HOM05D007191 ORTHO05D002709 1.2e-45 188.0 137 63.5
Pp3c5_6210 Physcomitrium patens HOM05D007191 ORTHO05D009370 2.0e-45 187.2 210 46.7
MCO07G132 Micromonas commoda HOM05D007191 ORTHO05D009370 3.5e-42 176.4 298 36.9
Cre17.g744947 Chlamydomonas reinhardtii HOM05D007191 ORTHO05D009370 1.1e-32 144.8 359 30.1
PGR102G1719 Punica granatum HOM05D007191 ORTHO05D009370 2.2e-31 140.6 126 56.3
Cc00_g34880 Coffea canephora HOM05D007191 ORTHO05D009370 8.2e-31 138.7 144 49.3
SEGI_38116 Sequoiadendron giganteum HOM05D007191 ORTHO05D009370 1.2e-29 134.8 167 47.9
PRCOL_00003319 Prasinoderma coloniale HOM05D007191 ORTHO05D009370 2.7e-26 123.6 294 33.7
Cc07_g13870 Coffea canephora HOM05D007191 ORTHO05D003232 2.2e-20 104.0 69 69.6
SEGI_29034 Sequoiadendron giganteum HOM05D007191 ORTHO05D009370 7.2e-19 99.0 182 37.4
Cc07_g13860 Coffea canephora HOM05D007191 ORTHO05D009370 3.6e-18 96.7 106 48.1
Ca_28666_v3 Cicer arietinum L. HOM05D005801 ORTHO05D009370 1.8e-09 67.8 146 31.5
GSVIVG01015302001 Vitis vinifera HOM05D005801 ORTHO05D008555 4.4e-08 63.2 188 30.9
CSS0007107 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 5.7e-08 62.8 61 52.5
CSS0022959 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 5.7e-08 62.8 61 52.5
ECA232G1677 Erigeron canadensis HOM05D006539 ORTHO05D008694 4.8e-07 59.7 143 30.8
RcHm_v2.0_Chr6g0269301 Rosa chinensis HOM05D007191 ORTHO05D009370 1.4e-06 58.2 72 41.7
SMO367G0373 Selaginella moellendorffii HOM05D005801 ORTHO05D008555 4.1e-06 56.6 180 28.9


User provided reference genes

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