Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.6NZ8WT Arachis hypogaea HOM05D000001 ORTHO05D082940 9.6e-42 172.9 80 100.0
arahy.Tifrunner.gnm1.ann1.0Y0IE3 Arachis hypogaea HOM05D000001 ORTHO05D000003 5.3e-16 87.4 43 90.7
arahy.Tifrunner.gnm1.ann1.1VF1JE Arachis hypogaea HOM05D000001 ORTHO05D000003 5.3e-16 87.4 43 90.7
Phvul.010G100600 Phaseolus vulgaris HOM05D000001 ORTHO05D000003 3.0e-11 71.6 47 66.0
Glyma.07G068800 Glycine max HOM05D000001 ORTHO05D000003 1.5e-10 69.3 42 69.0
VMungo0331G2031 Vigna mungo HOM05D000001 ORTHO05D000003 3.3e-10 68.2 57 52.6
TPR.G17907 Trifolium pratense HOM05D000001 ORTHO05D000003 7.5e-10 67.0 49 57.1
Ca_23607_v3 Cicer arietinum L. HOM05D000001 ORTHO05D000003 2.2e-09 65.5 47 59.6
Medtr8g028890 Medicago truncatula HOM05D000001 ORTHO05D000003 1.4e-08 62.8 49 53.1
Lj3g0007641 Lotus japonicus HOM05D000001 ORTHO05D000003 1.8e-08 62.4 47 53.2
Psat0s5023g0040 Pisum sativum HOM05D000001 ORTHO05D019827 1.8e-08 62.4 47 55.3
Psat2g062680 Pisum sativum HOM05D000001 ORTHO05D019827 1.8e-08 62.4 47 55.3
Psat5g235920 Pisum sativum HOM05D000001 ORTHO05D019827 2.4e-08 62.0 47 55.3
RcHm_v2.0_Chr1g0356771 Rosa chinensis HOM05D000001 ORTHO05D000003 3.1e-08 61.6 40 62.5
Lalb_Chr10g0096801 Lupinus albus HOM05D000001 ORTHO05D000003 9.1e-08 60.1 57 43.9
Prupe.2G173500 Prunus persica HOM05D000001 ORTHO05D000003 2.7e-07 58.5 49 51.0
Psat3g157640 Pisum sativum HOM05D000001 ORTHO05D019827 3.5e-07 58.2 47 53.2
Psat5g256880 Pisum sativum HOM05D000001 ORTHO05D019827 3.5e-07 58.2 47 53.2
FAN01G1820 Fragaria x ananassa HOM05D000001 ORTHO05D000003 1.7e-06 55.8 49 49.0
FAN03G2026 Fragaria x ananassa HOM05D000001 ORTHO05D000003 1.7e-06 55.8 49 49.0
TWI59G1022 Tripterygium wilfordii HOM05D000001 ORTHO05D000003 2.2e-06 55.5 61 39.3
ClCG06G003560 Citrullus lanatus HOM05D000001 ORTHO05D000003 3.8e-06 54.7 49 53.1
Manes.05G032300 Manihot esculenta HOM05D000001 ORTHO05D000003 3.8e-06 54.7 47 46.8
Dinv32499 Davidia involucrata HOM05D000001 ORTHO05D000003 6.5e-06 53.9 62 41.9
FvH4_7g14820 Fragaria vesca HOM05D000001 ORTHO05D000003 6.5e-06 53.9 49 49.0
FAN06G3387 Fragaria x ananassa HOM05D000001 ORTHO05D000003 6.5e-06 53.9 49 49.0


User provided reference genes

Program Settings