Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.6NUN1E Arachis hypogaea HOM05D005918 ORTHO05D008619 2.0e-46 188.7 93 100.0
arahy.Tifrunner.gnm1.ann1.XX3M9U Arachis hypogaea HOM05D005918 ORTHO05D008619 2.0e-46 188.7 93 100.0
Medtr4g045900 Medicago truncatula HOM05D005918 ORTHO05D008619 4.0e-39 164.5 93 87.1
TPR.G24493 Trifolium pratense HOM05D005918 ORTHO05D008619 3.4e-38 161.4 93 86.0
Lalb_Chr19g0135611 Lupinus albus HOM05D005918 ORTHO05D008619 9.8e-38 159.8 93 84.9
Manes.13G075841 Manihot esculenta HOM05D005918 ORTHO05D008619 1.9e-36 155.6 93 78.5
Glyma.12G103400 Glycine max HOM05D005918 ORTHO05D008619 2.4e-36 155.2 93 86.0
Phvul.011G108100 Phaseolus vulgaris HOM05D005918 ORTHO05D008619 5.4e-36 154.1 93 84.9
QL08p034510 Quercus lobata HOM05D005918 ORTHO05D008619 5.4e-36 154.1 91 80.2
Psat7g156000 Pisum sativum HOM05D005918 ORTHO05D008619 9.2e-36 153.3 91 82.4
VMungo1127G0943 Vigna mungo HOM05D005918 ORTHO05D008619 1.2e-35 152.9 93 83.9
Cfa014484 Carpinus fangiana HOM05D005918 ORTHO05D008619 1.6e-35 152.5 93 77.4
Lalb_Chr03g0028981 Lupinus albus HOM05D005918 ORTHO05D008619 4.6e-35 151.0 93 81.7
Cpa.g.sc34.53 Carica papaya HOM05D005918 ORTHO05D008619 7.8e-35 150.2 92 77.2
Ciclev10018135m.g Citrus clementina HOM05D005918 ORTHO05D008619 3.9e-34 147.9 93 74.2
Haze_13001 Corylus avellana HOM05D005918 ORTHO05D008619 5.0e-34 147.5 93 74.2
CiPaw.03G165700 Carya illinoinensis HOM05D005918 ORTHO05D008619 8.6e-34 146.7 93 77.4
Lj3g0013576 Lotus japonicus HOM05D005918 ORTHO05D008619 1.9e-33 145.6 94 77.7
FAN05G1098 Fragaria x ananassa HOM05D005918 ORTHO05D008619 5.6e-33 144.1 91 74.7
MD09G1101500 Malus domestica HOM05D005918 ORTHO05D008619 5.6e-33 144.1 93 76.3
Sabra13G0121500 Salix brachista HOM05D005918 ORTHO05D008619 7.3e-33 143.7 92 71.7
FvH4_6g44010 Fragaria vesca HOM05D005918 ORTHO05D008619 1.6e-32 142.5 91 73.6
Thecc.02G165700 Theobroma cacao HOM05D005918 ORTHO05D008619 2.8e-32 141.7 91 75.8
TWI75G1325 Tripterygium wilfordii HOM05D005918 ORTHO05D008619 3.6e-32 141.4 93 73.1
Potri.013G151200 Populus trichocarpa HOM05D005918 ORTHO05D008619 4.7e-32 141.0 92 71.7
Dinv13860 Davidia involucrata HOM05D005918 ORTHO05D008619 6.2e-32 140.6 93 71.0
Atru.chr6.3104 Acer truncatum HOM05D005918 ORTHO05D008619 1.1e-31 139.8 93 73.1
Prupe.3G224700 Prunus persica HOM05D005918 ORTHO05D008619 1.8e-31 139.0 93 72.0
Duzib052G0766 Durio zibethinus HOM05D005918 ORTHO05D008619 3.1e-31 138.3 91 73.6
RcHm_v2.0_Chr2g0160751 Rosa chinensis HOM05D005918 ORTHO05D008619 3.1e-31 138.3 93 73.1
Actinidia27026 Actinidia chinensis HOM05D005918 ORTHO05D008619 8.9e-31 136.7 93 67.7
Duzib132G0072 Durio zibethinus HOM05D005918 ORTHO05D008619 2.2e-29 132.1 91 71.4
Gohir.D13G063800 Gossypium hirsutum HOM05D005918 ORTHO05D008619 2.9e-29 131.7 88 72.7
Gorai.013G072400 Gossypium raimondii HOM05D005918 ORTHO05D008619 2.9e-29 131.7 88 72.7
Gohir.A13G058200 Gossypium hirsutum HOM05D005918 ORTHO05D008619 1.4e-28 129.4 88 71.6
Rhsim06G0154300 Rhododendron simsii HOM05D005918 ORTHO05D008619 1.4e-28 129.4 93 67.7
MD17G1089100 Malus domestica HOM05D005918 ORTHO05D008619 7.1e-28 127.1 79 78.5
Sc06g0006100 Simmondsia chinensis HOM05D005918 ORTHO05D008619 9.2e-28 126.7 90 65.6
CSS0021142 Camellia sinensis var. sinensis HOM05D005918 ORTHO05D008619 4.6e-27 124.4 93 64.5
Lj1C747T5 Lonicera japonica HOM05D005918 ORTHO05D008619 1.7e-26 122.5 93 63.4
THA.LOC104826019 Tarenaya hassleriana HOM05D005918 ORTHO05D008619 1.9e-25 119.0 93 68.8
Solyc07g053040.3 Solanum lycopersicum HOM05D005918 ORTHO05D008619 7.3e-25 117.1 94 58.5
Sopen07g026590 Solanum pennellii HOM05D005918 ORTHO05D008619 7.3e-25 117.1 94 58.5
PGSC0003DMG400026160 Solanum tuberosum HOM05D005918 ORTHO05D008619 7.3e-25 117.1 94 58.5
CAN.G640.5 Capsicum annuum HOM05D005918 ORTHO05D008619 9.5e-25 116.7 93 59.1
Cc05_g05630 Coffea canephora HOM05D005918 ORTHO05D008619 5.2e-23 110.9 92 57.6
Oeu029444.1 Olea europaea HOM05D005918 ORTHO05D008619 5.2e-23 110.9 93 55.9
SGA_v2.0_scaffold147G36349 Striga asiatica HOM05D005918 ORTHO05D008619 5.2e-23 110.9 91 60.4
Peaxi162Scf00007g01619 Petunia axillaris HOM05D005918 ORTHO05D008619 8.9e-23 110.2 94 58.5
FAN02G3920 Fragaria x ananassa HOM05D005918 ORTHO05D008619 1.2e-22 109.8 74 70.3
PGR042G3696 Punica granatum HOM05D005918 ORTHO05D008619 9.9e-22 106.7 92 58.7
AL6G49710 Arabidopsis lyrata HOM05D005918 ORTHO05D008619 2.9e-21 105.1 91 60.4
CARHR251670 Cardamine hirsuta HOM05D005918 ORTHO05D008619 2.9e-21 105.1 91 60.4
AT4G03220 Arabidopsis thaliana HOM05D005918 ORTHO05D008619 6.4e-21 104.0 91 59.3
BcaB05g23693 Brassica carinata HOM05D005918 ORTHO05D008619 8.4e-21 103.6 91 59.3
A02p25150 Brassica napus HOM05D005918 ORTHO05D008619 1.4e-20 102.8 91 59.3
BraA02t07503Z Brassica rapa HOM05D005918 ORTHO05D008619 1.4e-20 102.8 91 59.3
Migut.M00375 Erythranthe guttata HOM05D005918 ORTHO05D008619 1.4e-20 102.8 91 54.9
BcaC03g16217 Brassica carinata HOM05D005918 ORTHO05D008619 1.9e-20 102.4 91 59.3
C02p39950 Brassica napus HOM05D005918 ORTHO05D008619 1.9e-20 102.4 91 59.3
BolC2t10022H Brassica oleracea HOM05D005918 ORTHO05D008619 1.9e-20 102.4 91 59.3
Carub.0006s3383 Capsella rubella HOM05D005918 ORTHO05D008619 1.9e-20 102.4 86 61.6
Aa31LG5G2720 Aethionema arabicum HOM05D005918 ORTHO05D008619 4.1e-20 101.3 91 57.1
Thhalv10029130m.g Eutrema salsugineum HOM05D005918 ORTHO05D008619 1.2e-19 99.8 91 57.1
ClCG02G011180 Citrullus lanatus HOM05D005918 ORTHO05D008619 2.1e-19 99.0 89 55.1
Sp6g03260 Schrenkiella parvula HOM05D005918 ORTHO05D008619 6.0e-19 97.4 91 56.0
MELO3C019770.2 Cucumis melo HOM05D005918 ORTHO05D008619 7.8e-19 97.1 91 51.6
CsaV3_6G012610 Cucumis sativus L. HOM05D005918 ORTHO05D008619 7.8e-19 97.1 91 51.6
Nitab4.5_0004473g0010 Nicotiana tabacum HOM05D005918 ORTHO05D008619 3.9e-18 94.7 78 56.4
Eucgr.A01743 Eucalyptus grandis HOM05D005918 ORTHO05D008619 8.6e-18 93.6 88 50.0
Sed0020119 Sechium edule HOM05D005918 ORTHO05D008619 5.6e-17 90.9 86 51.2
CANSAT64G2706 Cannabis sativa HOM05D005918 ORTHO05D008619 2.0e-14 82.4 95 45.3
Lsat_1_v5_gn_3_42821 Lactuca sativa HOM05D005918 ORTHO05D008619 3.4e-14 81.6 90 44.4
BcaB05g23694 Brassica carinata HOM05D005918 ORTHO05D008619 9.9e-14 80.1 72 56.9
HanXRQChr17g0543071 Helianthus annuus HOM05D005918 ORTHO05D008619 6.4e-13 77.4 93 41.9
Nn1g06897 Nelumbo nucifera HOM05D005918 ORTHO05D008619 2.4e-12 75.5 85 45.9
Nitab4.5_0001134g0010 Nicotiana tabacum HOM05D005918 ORTHO05D008619 2.1e-11 72.4 50 62.0
Dinv18568 Davidia involucrata HOM05D005918 ORTHO05D008619 1.0e-10 70.1 91 47.3
DCAR_012967 Daucus carota HOM05D005918 ORTHO05D008619 1.7e-10 69.3 93 41.9
Rhsim06G0154700 Rhododendron simsii HOM05D000860 ORTHO05D006064 1.5e-09 66.2 89 43.8
CARHR116160 Cardamine hirsuta HOM05D005918 ORTHO05D008619 6.2e-08 60.8 59 55.9
Lj8P119T40 Lonicera japonica HOM05D005918 ORTHO05D008619 6.2e-08 60.8 88 45.5
ECA246G3314 Erigeron canadensis HOM05D005918 ORTHO05D008619 2.4e-07 58.9 93 40.9
MD01G1113200 Malus domestica HOM05D005918 ORTHO05D008619 3.1e-07 58.5 77 44.2
RcHm_v2.0_Chr5g0039731 Rosa chinensis HOM05D005918 ORTHO05D008619 9.0e-07 57.0 53 54.7
Cfa014483 Carpinus fangiana HOM05D005918 ORTHO05D008619 1.2e-06 56.6 51 45.1
Haze_13000 Corylus avellana HOM05D005918 ORTHO05D008619 2.6e-06 55.5 88 35.2
Prupe.3G224400 Prunus persica HOM05D005918 ORTHO05D008619 4.4e-06 54.7 52 50.0
FAN02G0270 Fragaria x ananassa HOM05D022583 ORTHO05D012873 5.8e-06 54.3 79 40.5
Prupe.3G224500 Prunus persica HOM05D005918 ORTHO05D008619 5.8e-06 54.3 50 54.0
FAN26G0398 Fragaria x ananassa HOM05D005918 ORTHO05D008619 9.9e-06 53.5 55 50.9
Rhsim06G0154400 Rhododendron simsii HOM05D005918 ORTHO05D008619 9.9e-06 53.5 91 36.3


User provided reference genes

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