Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.6MC3QX Arachis hypogaea HOM05D006715 ORTHO05D008345 0.0e+00 1342.4 674 100.0
arahy.Tifrunner.gnm1.ann1.SG7PGU Arachis hypogaea HOM05D006715 ORTHO05D008345 0.0e+00 1265.0 693 93.1
Lj2g0009741 Lotus japonicus HOM05D006715 ORTHO05D008345 1.2e-196 690.6 671 59.6
VMungo0464G1764 Vigna mungo HOM05D006715 ORTHO05D008345 8.3e-187 657.9 690 55.1
Psat1g102000 Pisum sativum HOM05D006715 ORTHO05D008345 5.0e-184 648.7 685 56.4
Medtr2g045070 Medicago truncatula HOM05D006715 ORTHO05D008345 2.5e-183 646.4 684 55.6
Phvul.004G094200 Phaseolus vulgaris HOM05D006715 ORTHO05D008345 2.5e-183 646.4 685 55.6
Glyma.16G166500 Glycine max HOM05D006715 ORTHO05D008345 7.8e-169 598.2 682 52.6
Cfa018312 Carpinus fangiana HOM05D006715 ORTHO05D008345 6.0e-161 572.0 687 49.9
TPR.G23114 Trifolium pratense HOM05D006715 ORTHO05D008345 3.1e-149 533.1 524 57.4
MD05G1027900 Malus domestica HOM05D006715 ORTHO05D008345 6.9e-149 531.9 714 47.1
Manes.02G180601 Manihot esculenta HOM05D006715 ORTHO05D008345 1.7e-147 527.3 702 46.9
RcHm_v2.0_Chr6g0275051 Rosa chinensis HOM05D006715 ORTHO05D008345 3.8e-147 526.2 714 47.1
QL09p013340 Quercus lobata HOM05D006715 ORTHO05D008345 4.6e-145 519.2 689 46.7
CiPaw.16G011000 Carya illinoinensis HOM05D006715 ORTHO05D008345 3.9e-144 516.2 651 49.5
CANSAT25G3857 Cannabis sativa HOM05D006715 ORTHO05D008345 3.7e-142 509.6 722 44.5
TWI34G0194 Tripterygium wilfordii HOM05D006715 ORTHO05D008345 3.7e-142 509.6 735 45.6
Duzib093G1010 Durio zibethinus HOM05D006715 ORTHO05D008345 6.2e-142 508.8 697 45.8
Prupe.8G033600 Prunus persica HOM05D006715 ORTHO05D008345 6.9e-141 505.4 707 45.8
Ciclev10000601m.g Citrus clementina HOM05D006715 ORTHO05D008345 3.4e-140 503.1 684 46.8
FvH4_2g13430 Fragaria vesca HOM05D006715 ORTHO05D008345 4.5e-140 502.7 712 46.1
FAN24G1213 Fragaria x ananassa HOM05D006715 ORTHO05D008345 7.6e-140 501.9 712 46.1
Thecc.08G154500 Theobroma cacao HOM05D006715 ORTHO05D008345 4.2e-138 496.1 695 46.2
ClCG08G002210 Citrullus lanatus HOM05D006715 ORTHO05D008345 6.7e-136 488.8 699 46.6
MELO3C025024.2 Cucumis melo HOM05D006715 ORTHO05D008345 1.1e-135 488.0 693 45.6
Potri.005G193500 Populus trichocarpa HOM05D006715 ORTHO05D008345 1.6e-134 484.2 679 45.1
Gorai.010G134600 Gossypium raimondii HOM05D006715 ORTHO05D008345 1.4e-133 481.1 676 45.4
TAR381G1273 Trochodendron aralioides HOM05D006715 ORTHO05D008345 1.2e-129 468.0 730 42.6
Lj7A376T34 Lonicera japonica HOM05D006715 ORTHO05D008345 2.1e-129 467.2 691 44.9
Gohir.A06G112504 Gossypium hirsutum HOM05D006715 ORTHO05D008345 1.0e-128 464.9 679 44.3
Actinidia17784 Actinidia chinensis HOM05D006715 ORTHO05D008345 2.0e-127 460.7 701 43.5
RcHm_v2.0_Chr5g0050861 Rosa chinensis HOM05D006715 ORTHO05D008345 2.5e-127 460.3 635 46.0
Atru.chr13.2084 Acer truncatum HOM05D006715 ORTHO05D008345 7.4e-127 458.8 661 45.2
Sed0009104 Sechium edule HOM05D006715 ORTHO05D008345 6.3e-126 455.7 683 44.5
Cpa.g.sc1027.1 Carica papaya HOM05D006715 ORTHO05D008345 1.2e-124 451.4 682 43.7
Eucgr.F02698 Eucalyptus grandis HOM05D006715 ORTHO05D008345 1.2e-121 441.4 699 42.9
Aqoxy5G00857 Aquilegia oxysepala HOM05D006715 ORTHO05D008345 2.1e-121 440.7 699 43.3
COL.COLO4_29857 Corchorus olitorius HOM05D006715 ORTHO05D008345 1.3e-118 431.4 532 48.7
PGR042G1662 Punica granatum HOM05D006715 ORTHO05D008345 3.1e-117 426.8 701 42.1
SGA_v2.0_scaffold25G11186 Striga asiatica HOM05D006715 ORTHO05D008345 2.6e-116 423.7 717 40.6
Ca_26954_v3 Cicer arietinum L. HOM05D006715 ORTHO05D008345 4.5e-116 422.9 666 43.8
THA.LOC104804670 Tarenaya hassleriana HOM05D006715 ORTHO05D008345 8.5e-115 418.7 684 42.4
Nn5g28769 Nelumbo nucifera HOM05D006715 ORTHO05D008345 7.2e-114 415.6 737 41.2
Hund26691 Selenicereus undatus HOM05D006715 ORTHO05D008345 2.1e-113 414.1 708 40.8
Nitab4.5_0001187g0100 Nicotiana tabacum HOM05D006715 ORTHO05D008345 3.6e-113 413.3 713 39.0
Rhsim05G0181200 Rhododendron simsii HOM05D006715 ORTHO05D008345 8.8e-112 408.7 575 44.2
CAN.G1215.10 Capsicum annuum HOM05D006715 ORTHO05D008345 4.4e-111 406.4 708 39.5
FAN27G2814 Fragaria x ananassa HOM05D006715 ORTHO05D008345 4.4e-111 406.4 580 46.2
Lsat_1_v5_gn_9_41180 Lactuca sativa HOM05D006715 ORTHO05D008345 4.8e-110 402.9 690 41.9
GSVIVG01034549001 Vitis vinifera HOM05D006715 ORTHO05D008345 1.4e-109 401.4 535 46.5
CsaV3_6G002600 Cucumis sativus L. HOM05D006715 ORTHO05D008345 2.0e-108 397.5 564 46.8
Haze_17767 Corylus avellana HOM05D006715 ORTHO05D008345 1.0e-107 395.2 427 51.8
Sopen04g027550 Solanum pennellii HOM05D006715 ORTHO05D008345 5.0e-107 392.9 711 37.7
Migut.N03207 Erythranthe guttata HOM05D006715 ORTHO05D008345 2.5e-106 390.6 714 39.9
MSTRG.24217 Avicennia marina HOM05D006715 ORTHO05D008345 6.1e-105 386.0 759 37.7
vmacro20039 Vaccinium macrocarpon HOM05D006715 ORTHO05D008345 1.5e-103 381.3 676 39.2
ECA232G1953 Erigeron canadensis HOM05D006715 ORTHO05D008345 2.0e-103 380.9 672 41.4
Peaxi162Scf00599g00121 Petunia axillaris HOM05D006715 ORTHO05D008345 4.8e-102 376.3 647 41.0
DCAR_010095 Daucus carota HOM05D006715 ORTHO05D008345 8.3e-102 375.6 509 44.4
PSO675G4790 Papaver somniferum HOM05D006715 ORTHO05D008345 1.2e-100 371.7 724 39.0
Lalb_Chr01g0009561 Lupinus albus HOM05D006715 ORTHO05D008345 2.9e-99 367.1 317 61.2
Sp1g32410 Schrenkiella parvula HOM05D006715 ORTHO05D008345 6.5e-99 365.9 669 38.3
HanXRQChr11g0320291 Helianthus annuus HOM05D006715 ORTHO05D008345 2.7e-97 360.5 688 39.5
Thhalv10003905m.g Eutrema salsugineum HOM05D006715 ORTHO05D008345 3.6e-97 360.1 670 37.8
AL1G51600 Arabidopsis lyrata HOM05D006715 ORTHO05D008345 9.8e-95 352.1 666 38.3
BcaB01g02294 Brassica carinata HOM05D006715 ORTHO05D008345 1.2e-92 345.1 667 37.8
BcaC04g24108 Brassica carinata HOM05D006715 ORTHO05D008345 4.5e-92 343.2 662 39.0
AT1G43245 Arabidopsis thaliana HOM05D006715 ORTHO05D008345 5.0e-91 339.7 665 38.0
EL10Ac1g01568 Beta vulgaris HOM05D006715 ORTHO05D008345 1.6e-89 334.7 679 36.7
Gohir.D06G116900 Gossypium hirsutum HOM05D006715 ORTHO05D008345 4.7e-89 333.2 479 45.5
Aa31LG6G9940 Aethionema arabicum HOM05D006715 ORTHO05D008345 8.0e-89 332.4 693 36.1
Dinv41067 Davidia involucrata HOM05D006715 ORTHO05D008345 1.3e-83 315.1 394 50.8
unitig_21.g20147 Utricularia gibba HOM05D006715 ORTHO05D008345 2.3e-83 314.3 706 35.3
BolC9t53031H Brassica oleracea HOM05D006715 ORTHO05D008345 2.8e-81 307.4 588 38.4
SalBow6G6609 Salvia bowleyana HOM05D006715 ORTHO05D008345 1.4e-80 305.1 705 34.5
CDE12G0089 Ceratophyllum demersum HOM05D006715 ORTHO05D008345 1.8e-80 304.7 694 34.7
SHI09071 Sapria himalayana HOM05D006715 ORTHO05D008345 1.5e-79 301.6 749 34.2
C09p00980 Brassica napus HOM05D006715 ORTHO05D008345 4.4e-79 300.1 583 38.4
Lalb_Chr01g0009551 Lupinus albus HOM05D006715 ORTHO05D008345 2.2e-78 297.7 319 54.2
BraA09t35760Z Brassica rapa HOM05D006715 ORTHO05D008345 2.4e-77 294.3 582 38.3
Glyma.16G166333 Glycine max HOM05D006715 ORTHO05D008345 3.2e-77 293.9 267 58.4
A09p00880 Brassica napus HOM05D006715 ORTHO05D008345 5.4e-77 293.1 582 38.5
PGSC0003DMG400024094 Solanum tuberosum HOM05D006715 ORTHO05D008345 1.6e-76 291.6 415 40.5
ATR0820G173 Amborella trichopoda HOM05D006715 ORTHO05D008345 3.9e-75 287.0 712 34.0
Zm00001eb083170 Zea mays HOM05D006715 ORTHO05D008345 9.8e-71 272.3 701 33.1
Os04g0423600 Oryza sativa ssp. japonica HOM05D006715 ORTHO05D008345 1.9e-69 268.1 705 31.5
Lj2g0026984 Lotus japonicus HOM05D006715 ORTHO05D008345 3.5e-68 263.8 224 62.5
Nitab4.5_0002764g0020 Nicotiana tabacum HOM05D006715 ORTHO05D008345 1.0e-67 262.3 391 40.4
AUR62026687 Chenopodium quinoa HOM05D006715 ORTHO05D008345 6.8e-64 249.6 340 43.8
CSS0020422 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 2.3e-59 234.6 264 50.4
CARHR035370 Cardamine hirsuta HOM05D006715 ORTHO05D008345 1.5e-58 231.9 445 38.0
Cc10_g14930 Coffea canephora HOM05D006715 ORTHO05D008345 1.5e-58 231.9 346 42.8
Glyma.16G166267 Glycine max HOM05D006715 ORTHO05D008345 1.6e-57 228.4 256 53.9
Potri.005G193701 Populus trichocarpa HOM05D006715 ORTHO05D008345 3.9e-51 207.2 309 41.4
TAR381G1110 Trochodendron aralioides HOM05D006715 ORTHO05D008345 6.6e-51 206.5 315 41.9
AUR62040600 Chenopodium quinoa HOM05D006715 ORTHO05D008345 2.5e-50 204.5 301 42.2
MBI17_g41095_MAGBIO Magnolia biondii HOM05D006715 ORTHO05D008345 1.4e-48 198.7 367 40.6
SEGI_11470 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 7.1e-45 186.4 364 36.5
Sc02g0003950 Simmondsia chinensis HOM05D006715 ORTHO05D008345 3.3e-42 177.6 268 40.3
HPP92_009296 Vanilla planifolia HOM05D006715 ORTHO05D008345 4.3e-42 177.2 371 37.5
Carub.0001s3453 Capsella rubella HOM05D006715 ORTHO05D008345 1.3e-41 175.6 378 34.4
CSS0028068 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 1.1e-34 152.5 251 41.4
HPP92_009297 Vanilla planifolia HOM05D006715 ORTHO05D008345 4.5e-31 140.6 298 35.9
Carub.0001s3454 Capsella rubella HOM05D006715 ORTHO05D008345 5.8e-31 140.2 209 44.0
Medtr3g062560 Medicago truncatula HOM05D006715 ORTHO05D008345 7.1e-29 133.3 176 54.0
SEGI_20433 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 9.6e-26 122.9 268 36.2
Gohir.1Z049355 Gossypium hirsutum HOM05D006715 ORTHO05D008345 6.9e-24 116.7 133 48.9
SEGI_34185 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 6.9e-24 116.7 461 26.2
Oeu031098.1 Olea europaea HOM05D006715 ORTHO05D008345 7.6e-23 113.2 217 35.9
CSS0046539 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 1.8e-19 102.1 144 46.5
arahy.Tifrunner.gnm1.ann1.12T13Y Arachis hypogaea HOM05D006715 ORTHO05D008345 1.3e-17 95.9 52 88.5
CSS0020713 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 5.3e-08 63.9 143 36.4
Sc02g0003960 Simmondsia chinensis HOM05D006715 ORTHO05D008345 2.0e-07 62.0 99 46.5
QL02p038810 Quercus lobata HOM05D006715 ORTHO05D008345 4.5e-07 60.8 182 31.9


User provided reference genes

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