Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.6M26EG Arachis hypogaea HOM05D000023 ORTHO05D002750 5.2e-57 224.2 115 100.0
arahy.Tifrunner.gnm1.ann1.0K28D6 Arachis hypogaea HOM05D000023 ORTHO05D000014 1.6e-42 176.0 145 69.0
arahy.Tifrunner.gnm1.ann1.NY0BH2 Arachis hypogaea HOM05D000023 ORTHO05D000014 1.6e-42 176.0 145 69.0
arahy.Tifrunner.gnm1.ann1.U56CX0 Arachis hypogaea HOM05D000023 ORTHO05D002750 1.6e-42 176.0 145 69.0
arahy.Tifrunner.gnm1.ann1.NE4L2N Arachis hypogaea HOM05D000023 ORTHO05D000014 2.8e-42 175.3 145 69.0
arahy.Tifrunner.gnm1.ann1.AECE52 Arachis hypogaea HOM05D000023 ORTHO05D000014 3.6e-42 174.9 145 68.3
arahy.Tifrunner.gnm1.ann1.FNZK40 Arachis hypogaea HOM05D000023 ORTHO05D002750 3.6e-42 174.9 145 68.3
arahy.Tifrunner.gnm1.ann1.SNZ0M3 Arachis hypogaea HOM05D000023 ORTHO05D000014 3.6e-42 174.9 145 68.3
arahy.Tifrunner.gnm1.ann1.F05QJ0 Arachis hypogaea HOM05D000023 ORTHO05D000014 4.8e-42 174.5 145 68.3
arahy.Tifrunner.gnm1.ann1.6V4S4C Arachis hypogaea HOM05D000023 ORTHO05D000014 8.1e-42 173.7 145 68.3
arahy.Tifrunner.gnm1.ann1.CR0MC9 Arachis hypogaea HOM05D000023 ORTHO05D000014 1.4e-41 172.9 145 68.3
arahy.Tifrunner.gnm1.ann1.Q0VZPJ Arachis hypogaea HOM05D000023 ORTHO05D002750 2.4e-41 172.2 111 81.1
arahy.Tifrunner.gnm1.ann1.FK9547 Arachis hypogaea HOM05D000023 ORTHO05D000014 3.1e-41 171.8 111 81.1
arahy.Tifrunner.gnm1.ann1.L4GJS9 Arachis hypogaea HOM05D000023 ORTHO05D000014 3.1e-41 171.8 145 67.6
arahy.Tifrunner.gnm1.ann1.WN5Q4L Arachis hypogaea HOM05D000023 ORTHO05D002750 2.0e-40 169.1 111 80.2
arahy.Tifrunner.gnm1.ann1.81QLLK Arachis hypogaea HOM05D000023 ORTHO05D000014 2.6e-40 168.7 111 78.4
arahy.Tifrunner.gnm1.ann1.A80E9C Arachis hypogaea HOM05D000023 ORTHO05D002750 5.8e-40 167.5 145 66.2
arahy.Tifrunner.gnm1.ann1.90WA6W Arachis hypogaea HOM05D000023 ORTHO05D000014 8.4e-39 163.7 111 76.6
arahy.Tifrunner.gnm1.ann1.IYZ7YC Arachis hypogaea HOM05D000023 ORTHO05D002750 1.9e-38 162.5 143 64.3
arahy.Tifrunner.gnm1.ann1.7GTF1H Arachis hypogaea HOM05D000023 ORTHO05D002750 9.3e-38 160.2 109 75.2
arahy.Tifrunner.gnm1.ann1.HGRY1C Arachis hypogaea HOM05D000023 ORTHO05D002750 7.9e-37 157.1 111 73.0
arahy.Tifrunner.gnm1.ann1.XM7CYI Arachis hypogaea HOM05D000023 ORTHO05D002750 6.7e-36 154.1 144 62.5
arahy.Tifrunner.gnm1.ann1.RS2VSU Arachis hypogaea HOM05D000023 ORTHO05D002750 2.8e-34 148.7 105 75.2
arahy.Tifrunner.gnm1.ann1.L32MA5 Arachis hypogaea HOM05D000023 ORTHO05D002750 5.7e-27 124.4 87 74.7
arahy.Tifrunner.gnm1.ann1.H7EX5A Arachis hypogaea HOM05D000023 ORTHO05D000014 5.9e-24 114.4 145 50.3
arahy.Tifrunner.gnm1.ann1.4P6X72 Arachis hypogaea HOM05D000023 ORTHO05D002750 1.7e-23 112.8 111 60.4
Glyma.18G158000 Glycine max HOM05D000023 ORTHO05D000014 6.5e-15 84.3 110 44.5
Glyma.19G056600 Glycine max HOM05D000023 ORTHO05D000014 6.5e-15 84.3 89 51.7
Glyma.18G154600 Glycine max HOM05D000023 ORTHO05D000014 1.1e-14 83.6 74 52.7
arahy.Tifrunner.gnm1.ann1.LG5LMM Arachis hypogaea HOM05D000023 ORTHO05D021465 7.2e-14 80.9 61 75.4
Lj2g0005504 Lotus japonicus HOM05D000023 ORTHO05D000014 7.2e-14 80.9 109 40.4
Psat0s2862g0200 Pisum sativum HOM05D000023 ORTHO05D002750 2.7e-13 79.0 88 40.9
Lj2g0011725 Lotus japonicus HOM05D000023 ORTHO05D000014 3.6e-13 78.6 81 46.9
arahy.Tifrunner.gnm1.ann1.1V06X0 Arachis hypogaea HOM05D000023 ORTHO05D000014 4.6e-13 78.2 59 76.3
arahy.Tifrunner.gnm1.ann1.1A1CKU Arachis hypogaea HOM05D000023 ORTHO05D000014 7.9e-13 77.4 86 43.0
arahy.Tifrunner.gnm1.ann1.8ZYM5I Arachis hypogaea HOM05D000023 ORTHO05D000014 7.9e-13 77.4 86 43.0
arahy.Tifrunner.gnm1.ann1.A7X4FA Arachis hypogaea HOM05D000023 ORTHO05D000014 1.8e-12 76.3 72 45.8
arahy.Tifrunner.gnm1.ann1.LM67GB Arachis hypogaea HOM05D000023 ORTHO05D000014 3.0e-12 75.5 82 43.9
Lj1g0007652 Lotus japonicus HOM05D000023 ORTHO05D000014 3.0e-12 75.5 58 53.4
Phvul.002G102700 Phaseolus vulgaris HOM05D000023 ORTHO05D002750 3.0e-12 75.5 101 45.5
Psat5g144320 Pisum sativum HOM05D000023 ORTHO05D002750 3.9e-12 75.1 88 38.6
arahy.Tifrunner.gnm1.ann1.TR6CUS Arachis hypogaea HOM05D000023 ORTHO05D000014 5.1e-12 74.7 86 41.9
Glyma.07G133300 Glycine max HOM05D000023 ORTHO05D000014 5.1e-12 74.7 110 39.1
arahy.Tifrunner.gnm1.ann1.BDH6KM Arachis hypogaea HOM05D000023 ORTHO05D000014 8.8e-12 73.9 86 41.9
Lj5g0009541 Lotus japonicus HOM05D000023 ORTHO05D000014 8.8e-12 73.9 68 47.1
arahy.Tifrunner.gnm1.ann1.0D33HZ Arachis hypogaea HOM05D000023 ORTHO05D002750 9.7e-11 70.5 55 54.5
arahy.Tifrunner.gnm1.ann1.4U464T Arachis hypogaea HOM05D000023 ORTHO05D000014 9.7e-11 70.5 84 45.2
PGR004G2136 Punica granatum HOM05D000023 ORTHO05D000014 1.3e-10 70.1 68 42.6
PGR042G3428 Punica granatum HOM05D000023 ORTHO05D000014 1.3e-10 70.1 68 42.6
PGR044G2632 Punica granatum HOM05D000023 ORTHO05D000014 1.3e-10 70.1 68 42.6
arahy.Tifrunner.gnm1.ann1.EKH796 Arachis hypogaea HOM05D000023 ORTHO05D000014 1.7e-10 69.7 108 37.0
PGR031G0470 Punica granatum HOM05D000023 ORTHO05D000014 1.7e-10 69.7 68 42.6
PGR102G1141 Punica granatum HOM05D000023 ORTHO05D000014 2.2e-10 69.3 68 42.6
arahy.Tifrunner.gnm1.ann1.CB97FM Arachis hypogaea HOM05D000023 ORTHO05D000014 3.7e-10 68.6 108 37.0
Psat4g012200 Pisum sativum HOM05D000023 ORTHO05D002750 4.8e-10 68.2 55 47.3
Psat6g123200 Pisum sativum HOM05D000023 ORTHO05D002750 6.3e-10 67.8 98 36.7
arahy.Tifrunner.gnm1.ann1.M9HV3F Arachis hypogaea HOM05D000023 ORTHO05D000014 1.1e-09 67.0 108 36.1
arahy.Tifrunner.gnm1.ann1.JW9I8M Arachis hypogaea HOM05D000023 ORTHO05D002750 1.4e-09 66.6 93 38.7
Psat7g107880 Pisum sativum HOM05D000023 ORTHO05D002750 1.4e-09 66.6 79 40.5
arahy.Tifrunner.gnm1.ann1.H35DJI Arachis hypogaea HOM05D000023 ORTHO05D002750 1.8e-09 66.2 106 34.0
arahy.Tifrunner.gnm1.ann1.RDT0WI Arachis hypogaea HOM05D000023 ORTHO05D002750 1.8e-09 66.2 55 52.7
arahy.Tifrunner.gnm1.ann1.VS78B6 Arachis hypogaea HOM05D000023 ORTHO05D000014 2.4e-09 65.9 108 35.2
arahy.Tifrunner.gnm1.ann1.YCYQ9Q Arachis hypogaea HOM05D000023 ORTHO05D000014 2.4e-09 65.9 108 35.2
Psat6g192520 Pisum sativum HOM05D000023 ORTHO05D000014 3.1e-09 65.5 79 38.0
Psat7g023240 Pisum sativum HOM05D000023 ORTHO05D000014 3.1e-09 65.5 79 38.0
Psat7g191200 Pisum sativum HOM05D000023 ORTHO05D002750 3.1e-09 65.5 72 40.3
arahy.Tifrunner.gnm1.ann1.M4RITN Arachis hypogaea HOM05D000023 ORTHO05D000014 4.1e-09 65.1 108 35.2
PGR142G2542 Punica granatum HOM05D000023 ORTHO05D000014 9.1e-09 63.9 119 34.5
Hund08340 Selenicereus undatus HOM05D000023 ORTHO05D000014 9.1e-09 63.9 80 38.8
arahy.Tifrunner.gnm1.ann1.ZTC9IW Arachis hypogaea HOM05D000023 ORTHO05D002750 1.2e-08 63.5 84 40.5
PGR102G0008 Punica granatum HOM05D000023 ORTHO05D000014 1.2e-08 63.5 120 35.8
TWI09G0787 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 1.2e-08 63.5 72 40.3
TWI38G0651 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 1.2e-08 63.5 72 40.3
TWI63G0881 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 1.2e-08 63.5 72 40.3
TWI63G1486 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 1.2e-08 63.5 72 40.3
TWI73G1202 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 1.2e-08 63.5 72 40.3
TWI81G1016 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 1.2e-08 63.5 72 40.3
PGR102G0123 Punica granatum HOM05D000023 ORTHO05D000014 1.5e-08 63.2 120 35.0
Psat1g116440 Pisum sativum HOM05D000023 ORTHO05D002750 2.6e-08 62.4 88 38.6
Hund02218 Selenicereus undatus HOM05D008981 ORTHO05D009195 2.6e-08 62.4 80 40.0
VMungo1383G0123 Vigna mungo HOM05D000023 ORTHO05D002750 2.6e-08 62.4 46 65.2
Hund30017 Selenicereus undatus HOM05D000023 ORTHO05D000014 3.4e-08 62.0 80 40.0
arahy.Tifrunner.gnm1.ann1.PH2KI6 Arachis hypogaea HOM05D000023 ORTHO05D002750 4.5e-08 61.6 99 40.4
Psat7g083800 Pisum sativum HOM05D000023 ORTHO05D002750 4.5e-08 61.6 48 52.1
Hund00853 Selenicereus undatus HOM05D000023 ORTHO05D000014 4.5e-08 61.6 80 38.8
Lj1P332T15 Lonicera japonica HOM05D000023 ORTHO05D000014 7.7e-08 60.8 64 43.8
Lj6P498T15 Lonicera japonica HOM05D000023 ORTHO05D002750 7.7e-08 60.8 64 43.8
Lj9P677T25 Lonicera japonica HOM05D000023 ORTHO05D002750 7.7e-08 60.8 64 43.8
PGR142G0273 Punica granatum HOM05D000023 ORTHO05D000014 7.7e-08 60.8 116 34.5
QL06p027029 Quercus lobata HOM05D000023 ORTHO05D000014 7.7e-08 60.8 107 34.6
QL06p051978 Quercus lobata HOM05D000023 ORTHO05D000014 7.7e-08 60.8 107 34.6
QL93p2004_0106 Quercus lobata HOM05D000023 ORTHO05D000014 7.7e-08 60.8 107 34.6
TPR.G10031 Trifolium pratense HOM05D002303 ORTHO05D007639 7.7e-08 60.8 58 41.4
Psat1g143080 Pisum sativum HOM05D000023 ORTHO05D002750 1.0e-07 60.5 97 34.0
TWI18G0310 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 1.0e-07 60.5 72 38.9
Migut.A00455 Erythranthe guttata HOM05D000023 ORTHO05D000014 1.3e-07 60.1 105 36.2
Lj9C56T3 Lonicera japonica HOM05D000023 ORTHO05D002750 1.3e-07 60.1 64 43.8
Hund04216 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.3e-07 60.1 101 35.6
Hund09860 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.3e-07 60.1 101 35.6
arahy.Tifrunner.gnm1.ann1.YDA91A Arachis hypogaea HOM05D000023 ORTHO05D000014 1.7e-07 59.7 75 40.0
COL.COLO4_12086 Corchorus olitorius HOM05D008981 ORTHO05D009195 1.7e-07 59.7 93 34.4
COL.COLO4_33410 Corchorus olitorius HOM05D008981 ORTHO05D009195 1.7e-07 59.7 93 34.4
Lj8P661T5 Lonicera japonica HOM05D000023 ORTHO05D002750 1.7e-07 59.7 64 43.8
Lj2C491G6 Lonicera japonica HOM05D000023 ORTHO05D002750 2.2e-07 59.3 64 43.8
Lj4P320T20 Lonicera japonica HOM05D000023 ORTHO05D002750 2.2e-07 59.3 64 43.8
EL10Ac5g11764 Beta vulgaris HOM05D000023 ORTHO05D000014 2.9e-07 58.9 101 36.6
CSS0034207 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.9e-07 58.9 111 35.1
Psat3g195360 Pisum sativum HOM05D000023 ORTHO05D002750 2.9e-07 58.9 94 36.2
PGR031G2723 Punica granatum HOM05D000023 ORTHO05D000014 2.9e-07 58.9 119 33.6
Hund17405 Selenicereus undatus HOM05D000023 ORTHO05D009195 2.9e-07 58.9 100 36.0
Lj8P366T21 Lonicera japonica HOM05D000023 ORTHO05D002750 3.8e-07 58.5 64 42.2
PSO170G4534 Papaver somniferum HOM05D000023 ORTHO05D000014 5.0e-07 58.2 78 39.7
PSO357G0624 Papaver somniferum HOM05D000023 ORTHO05D000014 5.0e-07 58.2 78 39.7
Rhsim03G0071100 Rhododendron simsii HOM05D000023 ORTHO05D000014 5.0e-07 58.2 59 42.4
Rhsim03G0071500 Rhododendron simsii HOM05D000023 ORTHO05D000014 5.0e-07 58.2 59 42.4
AUR62015349 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.5e-07 57.8 88 38.6
Lj8P655T9 Lonicera japonica HOM05D000023 ORTHO05D002750 6.5e-07 57.8 64 42.2
PSO210G5463 Papaver somniferum HOM05D000023 ORTHO05D000014 6.5e-07 57.8 99 33.3
Rhsim08G0130700 Rhododendron simsii HOM05D000023 ORTHO05D000014 6.5e-07 57.8 101 34.7
Hund15541 Selenicereus undatus HOM05D000023 ORTHO05D009195 6.5e-07 57.8 101 33.7
Hund22679 Selenicereus undatus HOM05D000023 ORTHO05D000014 6.5e-07 57.8 83 38.6
Ah.09g225470 Amaranthus hybridus HOM05D008981 ORTHO05D009195 8.5e-07 57.4 104 29.8
Rhsim13G0053900 Rhododendron simsii HOM05D000023 ORTHO05D000014 8.5e-07 57.4 101 36.6
arahy.Tifrunner.gnm1.ann1.L2FX1G Arachis hypogaea HOM05D000023 ORTHO05D000014 1.1e-06 57.0 108 33.3
FvH4_3g29752 Fragaria vesca HOM05D000023 ORTHO05D009195 1.1e-06 57.0 65 49.2
AUR62014098 Chenopodium quinoa HOM05D000023 ORTHO05D002750 1.4e-06 56.6 73 38.4
Nn6g34652 Nelumbo nucifera HOM05D000023 ORTHO05D000014 1.4e-06 56.6 101 33.7
Oeu022707.2 Olea europaea HOM05D000023 ORTHO05D000014 1.4e-06 56.6 40 62.5
SGA_v2.0_scaffold64G22025 Striga asiatica HOM05D000023 ORTHO05D000014 1.4e-06 56.6 44 59.1
Ah.13g070180 Amaranthus hybridus HOM05D008981 ORTHO05D009195 1.9e-06 56.2 101 29.7
Cpa.g.sc29.102 Carica papaya HOM05D000023 ORTHO05D000014 1.9e-06 56.2 67 43.3
ECA233G3146 Erigeron canadensis HOM05D000023 ORTHO05D000014 1.9e-06 56.2 40 62.5
HanXRQChr17g0565901 Helianthus annuus HOM05D000023 ORTHO05D000014 1.9e-06 56.2 40 62.5
MBI19_g32734_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 1.9e-06 56.2 111 35.1
Nitab4.5_0000098g0210 Nicotiana tabacum HOM05D000023 ORTHO05D000014 1.9e-06 56.2 40 62.5
PSO210G1900 Papaver somniferum HOM05D000023 ORTHO05D000014 1.9e-06 56.2 99 33.3
PSO210G6885 Papaver somniferum HOM05D000023 ORTHO05D002750 1.9e-06 56.2 76 40.8
Hund01377 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.9e-06 56.2 101 34.7
Rhsim12G0154800 Rhododendron simsii HOM05D000023 ORTHO05D000014 2.5e-06 55.8 101 35.6
arahy.Tifrunner.gnm1.ann1.9438IN Arachis hypogaea HOM05D000023 ORTHO05D002750 3.2e-06 55.5 108 32.4
EL10Ac4g08562 Beta vulgaris HOM05D000023 ORTHO05D000014 3.2e-06 55.5 107 32.7
Psat6g038440 Pisum sativum HOM05D000072 ORTHO05D000026 3.2e-06 55.5 85 34.1
MSTRG.10183 Avicennia marina HOM05D000023 ORTHO05D000014 4.2e-06 55.1 40 60.0
EL10Ac2g03067 Beta vulgaris HOM05D000023 ORTHO05D000014 4.2e-06 55.1 84 33.3
C01p46790 Brassica napus HOM05D000023 ORTHO05D000014 4.2e-06 55.1 116 35.3
BolC1t04652H Brassica oleracea HOM05D000023 ORTHO05D000014 4.2e-06 55.1 116 35.3
Migut.G00001 Erythranthe guttata HOM05D000023 ORTHO05D000014 4.2e-06 55.1 40 60.0
Migut.O00402 Erythranthe guttata HOM05D000023 ORTHO05D000014 4.2e-06 55.1 40 60.0
Rhsim04G0154100 Rhododendron simsii HOM05D033985 ORTHO05D002750 4.2e-06 55.1 46 47.8
Gohir.A12G120650 Gossypium hirsutum HOM05D000023 ORTHO05D000014 5.5e-06 54.7 73 38.4
Nn4g26353 Nelumbo nucifera HOM05D000023 ORTHO05D000014 5.5e-06 54.7 65 40.0
Rhsim02G0038300 Rhododendron simsii HOM05D000023 ORTHO05D000014 5.5e-06 54.7 76 35.5
Rhsim02G0219500 Rhododendron simsii HOM05D000023 ORTHO05D000014 5.5e-06 54.7 76 35.5
RhsimUnG0127700 Rhododendron simsii HOM05D000023 ORTHO05D000014 5.5e-06 54.7 76 35.5
AT3G17450 Arabidopsis thaliana HOM05D000023 ORTHO05D000014 7.2e-06 54.3 102 34.3
arahy.Tifrunner.gnm1.ann1.GKHQ6E Arachis hypogaea HOM05D000023 ORTHO05D000014 7.2e-06 54.3 52 50.0
arahy.Tifrunner.gnm1.ann1.W645MI Arachis hypogaea HOM05D000023 ORTHO05D000014 7.2e-06 54.3 52 50.0
CSS0008819 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 7.2e-06 54.3 52 50.0
Dinv18021 Davidia involucrata HOM05D000023 ORTHO05D000014 7.2e-06 54.3 52 50.0
Glyma.15G187500 Glycine max HOM05D000023 ORTHO05D000014 7.2e-06 54.3 52 50.0
Hma1.2p1_0013F.1_g007920 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 7.2e-06 54.3 52 50.0
Rhsim04G0137200 Rhododendron simsii HOM05D000023 ORTHO05D000014 7.2e-06 54.3 76 35.5
Rhsim04G0165800 Rhododendron simsii HOM05D000023 ORTHO05D000014 7.2e-06 54.3 52 50.0
RhsimUnG0234800 Rhododendron simsii HOM05D000023 ORTHO05D000014 7.2e-06 54.3 76 35.5
GSVIVG01017686001 Vitis vinifera HOM05D000023 ORTHO05D000014 7.2e-06 54.3 52 50.0
Aqoxy7G00677 Aquilegia oxysepala HOM05D000023 ORTHO05D000014 9.4e-06 53.9 65 38.5
arahy.Tifrunner.gnm1.ann1.Z2Z3DK Arachis hypogaea HOM05D000023 ORTHO05D002750 9.4e-06 53.9 53 41.5
Eucgr.B02527 Eucalyptus grandis HOM05D000023 ORTHO05D000014 9.4e-06 53.9 72 41.7
FvH4_2g24751 Fragaria vesca HOM05D000023 ORTHO05D009195 9.4e-06 53.9 45 53.3
FvH4_6g06672 Fragaria vesca HOM05D000023 ORTHO05D009195 9.4e-06 53.9 77 44.2
MBI18_g10388_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 9.4e-06 53.9 52 50.0
Phvul.006G005600 Phaseolus vulgaris HOM05D000023 ORTHO05D002750 9.4e-06 53.9 61 37.7
Hund10078 Selenicereus undatus HOM05D000023 ORTHO05D000014 9.4e-06 53.9 80 35.0


User provided reference genes

Program Settings