Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.6LUC20 Arachis hypogaea HOM05D002188 ORTHO05D018521 2.8e-39 164.9 86 100.0
Medtr1g112170 Medicago truncatula HOM05D002188 ORTHO05D002349 4.0e-09 64.7 61 59.0
arahy.Tifrunner.gnm1.ann1.N0KYQA Arachis hypogaea HOM05D002188 ORTHO05D002349 6.8e-09 63.9 61 60.7
arahy.Tifrunner.gnm1.ann1.67RIWC Arachis hypogaea HOM05D007145 ORTHO05D008952 8.9e-09 63.5 105 45.7
arahy.Tifrunner.gnm1.ann1.DML457 Arachis hypogaea HOM05D002188 ORTHO05D002349 1.5e-08 62.8 61 59.0
TPR.G2412 Trifolium pratense HOM05D002188 ORTHO05D002349 1.5e-08 62.8 61 59.0
Sc06g0002360 Simmondsia chinensis HOM05D002188 ORTHO05D002349 3.4e-08 61.6 52 63.5
Phvul.007G022000 Phaseolus vulgaris HOM05D002188 ORTHO05D002349 4.4e-08 61.2 61 59.0
Psat6g230760 Pisum sativum HOM05D002188 ORTHO05D002349 5.7e-08 60.8 58 58.6
Lj5g0015476 Lotus japonicus HOM05D002188 ORTHO05D002349 9.8e-08 60.1 52 63.5
VMungo0720G3003 Vigna mungo HOM05D002188 ORTHO05D002349 9.8e-08 60.1 61 57.4
Atru.chr12.1015 Acer truncatum HOM05D002188 ORTHO05D002349 1.3e-07 59.7 42 73.8
Aa31LG11G5580 Aethionema arabicum HOM05D002188 ORTHO05D002349 1.7e-07 59.3 42 78.6
Hund06779 Selenicereus undatus HOM05D002188 ORTHO05D002349 1.7e-07 59.3 52 65.4
Glyma.10G279300 Glycine max HOM05D002188 ORTHO05D002349 2.2e-07 58.9 52 61.5
Thecc.10G113600 Theobroma cacao HOM05D002188 ORTHO05D002349 2.8e-07 58.5 42 73.8
TWI38G0574 Tripterygium wilfordii HOM05D002188 ORTHO05D002349 2.8e-07 58.5 52 61.5
SalBow6G1665 Salvia bowleyana HOM05D002188 ORTHO05D002349 3.7e-07 58.2 53 64.2
Cpa.g.sc5.267 Carica papaya HOM05D002188 ORTHO05D002349 4.9e-07 57.8 42 71.4
Gohir.A13G010000 Gossypium hirsutum HOM05D002188 ORTHO05D002349 4.9e-07 57.8 42 71.4
Gohir.D13G010900 Gossypium hirsutum HOM05D002188 ORTHO05D002349 4.9e-07 57.8 42 71.4
Gorai.013G011700 Gossypium raimondii HOM05D002188 ORTHO05D002349 4.9e-07 57.8 42 71.4
TWI15G1250 Tripterygium wilfordii HOM05D002188 ORTHO05D002349 4.9e-07 57.8 44 68.2
CiPaw.13G039200 Carya illinoinensis HOM05D002188 ORTHO05D002349 6.3e-07 57.4 42 73.8
AUR62043604 Chenopodium quinoa HOM05D002188 ORTHO05D002349 6.3e-07 57.4 54 59.3
Hma1.2p1_1596F.1_g292800 Hydrangea macrophylla HOM05D002188 ORTHO05D002349 6.3e-07 57.4 42 73.8
Prupe.2G077000 Prunus persica HOM05D002188 ORTHO05D002349 6.3e-07 57.4 42 69.0
AUR62042077 Chenopodium quinoa HOM05D002188 ORTHO05D002349 8.3e-07 57.0 54 59.3
RcHm_v2.0_Chr1g0332391 Rosa chinensis HOM05D002188 ORTHO05D002349 8.3e-07 57.0 42 66.7
Lalb_Chr21g0309211 Lupinus albus HOM05D002188 ORTHO05D002349 1.1e-06 56.6 61 55.7
Sed0023206 Sechium edule HOM05D002188 ORTHO05D002349 1.1e-06 56.6 43 69.8
TAR633G0325 Trochodendron aralioides HOM05D002188 ORTHO05D002349 1.1e-06 56.6 42 71.4
Actinidia18602 Actinidia chinensis HOM05D002188 ORTHO05D002349 1.4e-06 56.2 42 71.4
CsaV3_6G004180 Cucumis sativus L. HOM05D002188 ORTHO05D002349 1.4e-06 56.2 43 69.8
Dinv11843 Davidia involucrata HOM05D002188 ORTHO05D002349 1.4e-06 56.2 82 47.6
Lj3C927G2 Lonicera japonica HOM05D002188 ORTHO05D002349 1.4e-06 56.2 52 61.5
Manes.10G061400 Manihot esculenta HOM05D002188 ORTHO05D002349 1.4e-06 56.2 50 60.0
THA.LOC104816463 Tarenaya hassleriana HOM05D002188 ORTHO05D002349 1.4e-06 56.2 51 58.8
Glyma.20G110400 Glycine max HOM05D002188 ORTHO05D002349 1.8e-06 55.8 52 57.7
PGR142G3839 Punica granatum HOM05D002188 ORTHO05D002349 1.8e-06 55.8 52 61.5
TAR636G2121 Trochodendron aralioides HOM05D002188 ORTHO05D002349 1.8e-06 55.8 42 69.0
unitig_37.g12348 Utricularia gibba HOM05D001468 ORTHO05D001404 1.8e-06 55.8 53 60.4
Ah.04g160210 Amaranthus hybridus HOM05D002188 ORTHO05D002349 2.4e-06 55.5 61 50.8
BcaB01g05902 Brassica carinata HOM05D002188 ORTHO05D002349 2.4e-06 55.5 42 71.4
A03p01800 Brassica napus HOM05D002188 ORTHO05D002349 2.4e-06 55.5 42 71.4
A10p31430 Brassica napus HOM05D002188 ORTHO05D002349 2.4e-06 55.5 42 71.4
C03p02180 Brassica napus HOM05D002188 ORTHO05D002349 2.4e-06 55.5 42 71.4
BolC3t12769H Brassica oleracea HOM05D002188 ORTHO05D002349 2.4e-06 55.5 42 71.4
BraA03t09552Z Brassica rapa HOM05D002188 ORTHO05D002349 2.4e-06 55.5 42 71.4
BraA10t45189Z Brassica rapa HOM05D002188 ORTHO05D002349 2.4e-06 55.5 42 71.4
MD07G1063700 Malus domestica HOM05D002188 ORTHO05D002349 2.4e-06 55.5 42 66.7
Rhsim09G0142300 Rhododendron simsii HOM05D002188 ORTHO05D002349 2.4e-06 55.5 50 62.0
Sed0011767 Sechium edule HOM05D002188 ORTHO05D002349 2.4e-06 55.5 43 67.4
Actinidia06694 Actinidia chinensis HOM05D002188 ORTHO05D002349 3.1e-06 55.1 42 69.0
EL10Ac4g08680 Beta vulgaris HOM05D002188 ORTHO05D002349 3.1e-06 55.1 61 50.8
C02p35100 Brassica napus HOM05D003928 ORTHO05D018521 3.1e-06 55.1 35 77.1
CDE02G1320 Ceratophyllum demersum HOM05D002188 ORTHO05D002349 3.1e-06 55.1 56 57.1
ClCG08G008230 Citrullus lanatus HOM05D002188 ORTHO05D002349 3.1e-06 55.1 40 67.5
MELO3C019893.2 Cucumis melo HOM05D002188 ORTHO05D002349 3.1e-06 55.1 43 67.4
Eucgr.J00982 Eucalyptus grandis HOM05D002188 ORTHO05D002349 3.1e-06 55.1 42 69.0
Sp6g38080 Schrenkiella parvula HOM05D002188 ORTHO05D002349 3.1e-06 55.1 42 69.0
arahy.Tifrunner.gnm1.ann1.HF2CBI Arachis hypogaea HOM05D002188 ORTHO05D083551 4.1e-06 54.7 50 62.0
CARHR208550 Cardamine hirsuta HOM05D002188 ORTHO05D002349 4.1e-06 54.7 42 69.0
CDE04G0376 Ceratophyllum demersum HOM05D002188 ORTHO05D002349 4.1e-06 54.7 56 55.4
Ca_25667_v3 Cicer arietinum L. HOM05D002188 ORTHO05D002349 4.1e-06 54.7 49 61.2
Thhalv10014331m.g Eutrema salsugineum HOM05D002188 ORTHO05D002349 4.1e-06 54.7 42 69.0
SGA_v2.0_scaffold62G21337 Striga asiatica HOM05D002188 ORTHO05D002349 4.1e-06 54.7 53 60.4
ATR0081G050 Amborella trichopoda HOM05D002188 ORTHO05D002349 5.4e-06 54.3 52 53.8
BcaB05g21750 Brassica carinata HOM05D002188 ORTHO05D002349 5.4e-06 54.3 35 77.1
BcaC03g15768 Brassica carinata HOM05D003928 ORTHO05D018521 5.4e-06 54.3 35 80.0
BolC2t09524H Brassica oleracea HOM05D003928 ORTHO05D018521 5.4e-06 54.3 35 80.0
FvH4_1g30540 Fragaria vesca HOM05D002188 ORTHO05D002349 5.4e-06 54.3 42 66.7
MSTRG.27576 Avicennia marina HOM05D002188 ORTHO05D002349 7.0e-06 53.9 53 58.5
BcaB05g21749 Brassica carinata HOM05D002188 ORTHO05D002349 7.0e-06 53.9 44 65.9
CiPaw.14G033000 Carya illinoinensis HOM05D002188 ORTHO05D002349 9.2e-06 53.5 61 50.8
COL.COLO4_26829 Corchorus olitorius HOM05D002188 ORTHO05D002349 9.2e-06 53.5 41 70.7
vmacro10306 Vaccinium macrocarpon HOM05D002188 ORTHO05D002349 9.2e-06 53.5 42 66.7


User provided reference genes

Program Settings