Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.6K3MVX Arachis hypogaea HOM05D004415 ORTHO05D005198 2.0e-178 629.0 323 100.0
arahy.Tifrunner.gnm1.ann1.QWIY8B Arachis hypogaea HOM05D004415 ORTHO05D005198 3.7e-92 342.4 177 98.3
arahy.Tifrunner.gnm1.ann1.Z0R64B Arachis hypogaea HOM05D004415 ORTHO05D005198 4.1e-91 339.0 177 97.2
arahy.Tifrunner.gnm1.ann1.5MZ6ZS Arachis hypogaea HOM05D004415 ORTHO05D005198 4.5e-90 335.5 177 96.6
arahy.Tifrunner.gnm1.ann1.W2C20P Arachis hypogaea HOM05D004415 ORTHO05D005198 4.9e-76 288.9 149 98.0
arahy.Tifrunner.gnm1.ann1.09GK0V Arachis hypogaea HOM05D004415 ORTHO05D005198 1.3e-73 280.8 143 98.6
Lalb_Chr07g0185681 Lupinus albus HOM05D004415 ORTHO05D005198 3.3e-72 276.2 177 78.0
arahy.Tifrunner.gnm1.ann1.ZSFV9B Arachis hypogaea HOM05D004415 ORTHO05D005198 2.1e-71 273.5 223 65.5
Glyma.15G191200 Glycine max HOM05D004415 ORTHO05D005198 1.1e-70 271.2 177 76.3
Phvul.009G218500 Phaseolus vulgaris HOM05D004415 ORTHO05D005198 8.9e-70 268.1 178 77.0
Potri.011G155200 Populus trichocarpa HOM05D004415 ORTHO05D005198 8.9e-70 268.1 223 61.9
Sabra16G0298000 Salix brachista HOM05D004415 ORTHO05D005198 2.6e-69 266.5 223 62.3
Potri.001G440600 Populus trichocarpa HOM05D004415 ORTHO05D005198 3.4e-69 266.2 223 61.0
arahy.Tifrunner.gnm1.ann1.UW0JAL Arachis hypogaea HOM05D004415 ORTHO05D005198 4.4e-69 265.8 223 64.6
Sabra16G0300000 Salix brachista HOM05D004415 ORTHO05D005198 7.5e-69 265.0 223 61.9
Lalb_Chr11g0073471 Lupinus albus HOM05D004415 ORTHO05D005198 9.8e-69 264.6 177 75.7
Ca_02386_v3 Cicer arietinum L. HOM05D004415 ORTHO05D005198 1.3e-68 264.2 224 62.5
Ciclev10016110m.g Citrus clementina HOM05D004415 ORTHO05D005198 1.3e-68 264.2 177 72.9
Psat1g018760 Pisum sativum HOM05D004415 ORTHO05D005198 1.3e-68 264.2 177 74.0
Medtr2g047110 Medicago truncatula HOM05D004415 ORTHO05D005198 3.7e-68 262.7 224 62.5
GSVIVG01037942001 Vitis vinifera HOM05D004415 ORTHO05D005198 1.1e-67 261.2 223 61.0
CSS0048897 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 3.2e-67 259.6 223 60.5
VMungo1309G0873 Vigna mungo HOM05D004415 ORTHO05D005198 4.1e-67 259.2 177 74.6
Ca_17811_v3 Cicer arietinum L. HOM05D004415 ORTHO05D005198 5.4e-67 258.8 179 72.1
Glyma.09G083100 Glycine max HOM05D004415 ORTHO05D005198 5.4e-67 258.8 177 75.1
Aqoxy4G00050 Aquilegia oxysepala HOM05D004415 ORTHO05D005198 7.0e-67 258.5 177 72.9
PGR083G0443 Punica granatum HOM05D004415 ORTHO05D005198 9.2e-67 258.1 224 60.7
Medtr8g089250 Medicago truncatula HOM05D004415 ORTHO05D005198 2.7e-66 256.5 177 71.8
CiPaw.09G149000 Carya illinoinensis HOM05D004415 ORTHO05D005198 3.5e-66 256.1 223 60.5
CSS0002194 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 6.0e-66 255.4 223 59.6
CSS0010489 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 6.0e-66 255.4 223 59.6
Thecc.06G005600 Theobroma cacao HOM05D004415 ORTHO05D005198 6.0e-66 255.4 177 72.3
Duzib235G0717 Durio zibethinus HOM05D004415 ORTHO05D005198 7.8e-66 255.0 224 59.4
Lj6g0004921 Lotus japonicus HOM05D004415 ORTHO05D005198 7.8e-66 255.0 177 72.3
Nn7g37839 Nelumbo nucifera HOM05D004415 ORTHO05D005198 7.8e-66 255.0 223 58.3
TAR627G0414 Trochodendron aralioides HOM05D004415 ORTHO05D005198 7.8e-66 255.0 178 70.2
TAR627G1150 Trochodendron aralioides HOM05D004415 ORTHO05D005198 7.8e-66 255.0 178 70.2
Cfa000755 Carpinus fangiana HOM05D004415 ORTHO05D005198 1.3e-65 254.2 177 71.2
Lalb_Chr08g0233111 Lupinus albus HOM05D004415 ORTHO05D005198 1.3e-65 254.2 177 70.6
TPR.G6264 Trifolium pratense HOM05D004415 ORTHO05D005198 1.3e-65 254.2 179 72.6
TWI38G1449 Tripterygium wilfordii HOM05D004415 ORTHO05D005198 1.7e-65 253.8 224 59.8
Gohir.A06G202400 Gossypium hirsutum HOM05D004415 ORTHO05D005198 3.0e-65 253.1 223 57.8
CDE03G0179 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 5.0e-65 252.3 223 57.0
Gorai.010G247000 Gossypium raimondii HOM05D004415 ORTHO05D005198 6.6e-65 251.9 223 57.8
TPR.G22904 Trifolium pratense HOM05D004415 ORTHO05D005198 1.1e-64 251.1 172 70.9
Actinidia29247 Actinidia chinensis HOM05D004415 ORTHO05D005198 1.5e-64 250.8 177 72.3
FAN21G2450 Fragaria x ananassa HOM05D004415 ORTHO05D005198 1.9e-64 250.4 202 61.9
FvH4_3g11520 Fragaria vesca HOM05D004415 ORTHO05D005198 3.3e-64 249.6 224 58.5
MD00G1097300 Malus domestica HOM05D004415 ORTHO05D005198 3.3e-64 249.6 223 58.3
Rhsim13G0126400 Rhododendron simsii HOM05D004415 ORTHO05D005198 3.3e-64 249.6 223 59.6
RcHm_v2.0_Chr5g0018471 Rosa chinensis HOM05D004415 ORTHO05D005198 4.3e-64 249.2 223 58.7
vmacro03476 Vaccinium macrocarpon HOM05D004415 ORTHO05D005198 7.3e-64 248.4 223 58.7
Dinv03287 Davidia involucrata HOM05D004415 ORTHO05D005198 9.5e-64 248.1 228 59.6
THA.LOC104812930 Tarenaya hassleriana HOM05D004415 ORTHO05D005198 9.5e-64 248.1 177 70.1
Atru.chr10.660 Acer truncatum HOM05D004415 ORTHO05D005198 1.2e-63 247.7 177 72.3
CANSAT35G0835 Cannabis sativa HOM05D004415 ORTHO05D005198 1.2e-63 247.7 224 59.8
Migut.M01938 Erythranthe guttata HOM05D004415 ORTHO05D005198 1.2e-63 247.7 224 58.0
FAN16G2189 Fragaria x ananassa HOM05D004415 ORTHO05D005198 1.2e-63 247.7 177 68.4
Sed0009944 Sechium edule HOM05D004415 ORTHO05D005198 1.2e-63 247.7 177 70.1
Sc17g0004090 Simmondsia chinensis HOM05D004415 ORTHO05D005198 1.2e-63 247.7 177 70.1
ClCG01G008890 Citrullus lanatus HOM05D004415 ORTHO05D005198 1.6e-63 247.3 177 69.5
SalBow8G0313 Salvia bowleyana HOM05D004415 ORTHO05D005198 1.6e-63 247.3 223 59.2
SalBow8G4844 Salvia bowleyana HOM05D004415 ORTHO05D005198 1.6e-63 247.3 223 59.2
MELO3C021810.2 Cucumis melo HOM05D004415 ORTHO05D005198 2.8e-63 246.5 177 68.4
CDE06G2804 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 4.7e-63 245.7 223 56.1
Hma1.2p1_0008F-2.1_g005810 Hydrangea macrophylla HOM05D004415 ORTHO05D005198 4.7e-63 245.7 224 58.0
Manes.16G062800 Manihot esculenta HOM05D004415 ORTHO05D005198 4.7e-63 245.7 223 59.2
CsaV3_1G037760 Cucumis sativus L. HOM05D004415 ORTHO05D005198 8.1e-63 245.0 177 68.4
COL.COLO4_22898 Corchorus olitorius HOM05D004415 ORTHO05D005198 1.1e-62 244.6 177 70.6
FAN25G0769 Fragaria x ananassa HOM05D004415 ORTHO05D005198 3.1e-62 243.0 177 67.8
Sp7g18770 Schrenkiella parvula HOM05D004415 ORTHO05D005198 3.1e-62 243.0 223 59.6
Cc09_g04060 Coffea canephora HOM05D004415 ORTHO05D005198 4.0e-62 242.7 177 67.2
BraA01t01153Z Brassica rapa HOM05D004415 ORTHO05D005198 5.2e-62 242.3 223 59.2
Lj1A1155G52 Lonicera japonica HOM05D004415 ORTHO05D005198 5.2e-62 242.3 223 58.3
Oeu063146.1 Olea europaea HOM05D004415 ORTHO05D005198 5.2e-62 242.3 177 69.5
A01p12100 Brassica napus HOM05D004415 ORTHO05D005198 8.9e-62 241.5 223 59.2
Carub.0007s2075 Capsella rubella HOM05D004415 ORTHO05D005198 8.9e-62 241.5 223 58.7
PSO675G6508 Papaver somniferum HOM05D004415 ORTHO05D005198 1.5e-61 240.7 178 66.9
C01p14410 Brassica napus HOM05D004415 ORTHO05D005198 2.0e-61 240.4 223 58.7
BolC1t01398H Brassica oleracea HOM05D004415 ORTHO05D005198 2.0e-61 240.4 223 58.7
Thhalv10025893m.g Eutrema salsugineum HOM05D004415 ORTHO05D005198 2.0e-61 240.4 223 58.3
unitig_37.g12064 Utricularia gibba HOM05D004415 ORTHO05D005198 2.0e-61 240.4 177 67.8
MSTRG.16315 Avicennia marina HOM05D004415 ORTHO05D005198 2.6e-61 240.0 223 56.1
CARHR227240 Cardamine hirsuta HOM05D004415 ORTHO05D005198 4.4e-61 239.2 223 58.3
Sed0021762 Sechium edule HOM05D004415 ORTHO05D005198 4.4e-61 239.2 178 68.5
ATR1098G142 Amborella trichopoda HOM05D004415 ORTHO05D005198 7.5e-61 238.4 223 56.1
PGSC0003DMG400021134 Solanum tuberosum HOM05D004415 ORTHO05D005198 7.5e-61 238.4 177 63.8
PSO541G2694 Papaver somniferum HOM05D004415 ORTHO05D005198 9.9e-61 238.0 178 66.3
Peaxi162Scf00195g00616 Petunia axillaris HOM05D004415 ORTHO05D005198 9.9e-61 238.0 177 64.4
Sopen02g018770 Solanum pennellii HOM05D004415 ORTHO05D005198 9.9e-61 238.0 177 63.8
Solyc02g069640.3 Solanum lycopersicum HOM05D004415 ORTHO05D005198 1.3e-60 237.7 177 63.3
Duzib043G0003 Durio zibethinus HOM05D004415 ORTHO05D005198 1.7e-60 237.3 179 65.9
CAN.G954.7 Capsicum annuum HOM05D004415 ORTHO05D005198 2.2e-60 236.9 177 63.8
AT4G20410 Arabidopsis thaliana HOM05D004415 ORTHO05D005198 2.9e-60 236.5 223 57.4
Ah.01g002800 Amaranthus hybridus HOM05D004415 ORTHO05D005198 3.7e-60 236.1 221 56.1
AL7G33480 Arabidopsis lyrata HOM05D004415 ORTHO05D005198 3.7e-60 236.1 223 57.8
QL05p063115 Quercus lobata HOM05D004415 ORTHO05D005198 3.7e-60 236.1 221 57.5
Hund01093 Selenicereus undatus HOM05D004415 ORTHO05D005198 3.7e-60 236.1 177 68.4
Cpa.g.sc173.46 Carica papaya HOM05D004415 ORTHO05D005198 4.9e-60 235.7 223 58.7
Gorai.009G116300 Gossypium raimondii HOM05D004415 ORTHO05D005198 1.9e-59 233.8 222 54.5
Prupe.4G102500 Prunus persica HOM05D004415 ORTHO05D005198 7.1e-59 231.9 224 57.6
AUR62025006 Chenopodium quinoa HOM05D004415 ORTHO05D005198 3.5e-58 229.6 223 56.1
AUR62006530 Chenopodium quinoa HOM05D004415 ORTHO05D005198 1.3e-57 227.6 224 55.8
Sabra11G0144600 Salix brachista HOM05D004415 ORTHO05D005198 1.7e-57 227.3 208 56.7
MSTRG.7566 Avicennia marina HOM05D004415 ORTHO05D005198 3.0e-57 226.5 178 64.0
SGA_v2.0_scaffold298G47634 Striga asiatica HOM05D004415 ORTHO05D005198 3.0e-57 226.5 176 63.6
HPP92_013188 Vanilla planifolia HOM05D004415 ORTHO05D005198 3.9e-57 226.1 223 54.7
Lsat_1_v5_gn_7_31101 Lactuca sativa HOM05D004415 ORTHO05D005198 8.6e-57 224.9 223 53.4
HanXRQChr04g0119541 Helianthus annuus HOM05D004415 ORTHO05D005198 2.5e-56 223.4 223 52.9
Nitab4.5_0010415g0030 Nicotiana tabacum HOM05D004415 ORTHO05D005198 5.6e-56 222.2 177 60.5
Gohir.D05G112100 Gossypium hirsutum HOM05D004415 ORTHO05D005198 9.5e-56 221.5 247 49.4
Nitab4.5_0007613g0030 Nicotiana tabacum HOM05D004415 ORTHO05D005198 9.5e-56 221.5 177 60.5
Aa31LG6G2800 Aethionema arabicum HOM05D004415 ORTHO05D005198 2.8e-55 219.9 223 55.2
Os04g0618500 Oryza sativa ssp. japonica HOM05D004415 ORTHO05D005198 4.7e-55 219.2 224 52.7
EL10Ac9g22486 Beta vulgaris HOM05D004415 ORTHO05D005198 6.2e-55 218.8 167 65.9
ECA236G1935 Erigeron canadensis HOM05D004415 ORTHO05D005198 1.8e-54 217.2 223 51.1
Eucgr.D01029 Eucalyptus grandis HOM05D004415 ORTHO05D005198 1.3e-52 211.1 140 73.6
CDE03G0221 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 3.9e-49 199.5 145 64.8
Gohir.A05G111501 Gossypium hirsutum HOM05D004415 ORTHO05D005198 3.3e-48 196.4 213 51.6
AagrBONN_evm.TU.Sc2ySwM_368.1346 Anthoceros agrestis HOM05D004415 ORTHO05D005198 4.3e-48 196.1 174 54.0
Haze_05963 Corylus avellana HOM05D004415 ORTHO05D005198 4.3e-48 196.1 184 56.0
Gohir.D06G219300 Gossypium hirsutum HOM05D004415 ORTHO05D005198 5.6e-48 195.7 176 55.7
TAR627G0753 Trochodendron aralioides HOM05D004415 ORTHO05D005198 1.6e-47 194.1 135 70.4
Zm00001eb072080 Zea mays HOM05D004415 ORTHO05D005198 3.1e-46 189.9 143 63.6
Mapoly0008s0129 Marchantia polymorpha HOM05D004415 ORTHO05D005198 2.7e-42 176.8 178 49.4
Pp3c19_23300 Physcomitrium patens HOM05D004415 ORTHO05D005198 3.5e-42 176.4 178 49.4
AagrBONN_evm.TU.Sc2ySwM_368.3355 Anthoceros agrestis HOM05D004415 ORTHO05D005198 5.1e-41 172.6 178 50.6
AagrBONN_evm.TU.Sc2ySwM_362.579 Anthoceros agrestis HOM05D004415 ORTHO05D005198 6.6e-41 172.2 178 51.1
CBR_g48904 Chara braunii HOM05D004415 ORTHO05D005198 6.6e-41 172.2 179 47.5
Zm00001eb410240 Zea mays HOM05D004415 ORTHO05D005198 1.1e-40 171.4 191 48.7
CBR_g24190 Chara braunii HOM05D004415 ORTHO05D005198 2.1e-39 167.2 179 46.9
VMungo0464G1344 Vigna mungo HOM05D004415 ORTHO05D005198 3.4e-37 159.8 106 76.4
SMO228G0081 Selaginella moellendorffii HOM05D004415 ORTHO05D005198 2.9e-36 156.8 191 42.9
Oeu063144.1 Olea europaea HOM05D004415 ORTHO05D005198 7.1e-35 152.1 182 48.4
Zm00001eb431060 Zea mays HOM05D004415 ORTHO05D005198 1.5e-32 144.4 144 53.5
Hma1.2p1_0008F-2.1_g005800 Hydrangea macrophylla HOM05D004415 ORTHO05D005198 5.6e-32 142.5 145 51.0
SEGI_22365 Sequoiadendron giganteum HOM05D004415 ORTHO05D005198 1.2e-29 134.8 118 61.9
Zm00001eb266710 Zea mays HOM05D004415 ORTHO05D005198 2.4e-27 127.1 98 61.2
MCO11G422 Micromonas commoda HOM05D004415 ORTHO05D005198 4.0e-22 109.8 164 39.6
FvH4_3g11480 Fragaria vesca HOM05D004415 ORTHO05D005198 1.3e-20 104.8 81 60.5
PRCOL_00005341 Prasinoderma coloniale HOM05D004415 ORTHO05D005198 3.0e-17 93.6 162 32.1
Cre08.g385700 Chlamydomonas reinhardtii HOM05D004415 ORTHO05D005198 5.1e-17 92.8 151 31.8
arahy.Tifrunner.gnm1.ann1.NJ63RV Arachis hypogaea HOM05D004415 ORTHO05D005198 5.5e-11 72.8 199 32.2
arahy.Tifrunner.gnm1.ann1.479FYN Arachis hypogaea HOM05D004415 ORTHO05D005198 6.1e-10 69.3 34 97.1
MBI02_g43828_MAGBIO Magnolia biondii HOM05D004415 ORTHO05D005198 1.0e-09 68.6 92 42.4
SEGI_29507 Sequoiadendron giganteum HOM05D004415 ORTHO05D005198 6.3e-07 59.3 92 35.9
VMungo0331G0484 Vigna mungo HOM05D003730 ORTHO05D005198 6.3e-07 59.3 39 71.8
arahy.Tifrunner.gnm1.ann1.YAAB6X Arachis hypogaea HOM05D004415 ORTHO05D005198 4.1e-06 56.6 27 100.0


User provided reference genes

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