Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.6JL1AX Arachis hypogaea HOM05D007016 ORTHO05D008847 3.7e-143 511.5 257 100.0
arahy.Tifrunner.gnm1.ann1.CXQL6Y Arachis hypogaea HOM05D007016 ORTHO05D008847 8.5e-140 500.4 257 98.1
Glyma.01G230300 Glycine max HOM05D007016 ORTHO05D008847 6.0e-85 318.2 259 66.4
Phvul.002G036800 Phaseolus vulgaris HOM05D007016 ORTHO05D008847 3.1e-81 305.8 259 63.3
VMungo1215G3083 Vigna mungo HOM05D007016 ORTHO05D008847 5.2e-81 305.1 259 63.7
Medtr5g008220 Medicago truncatula HOM05D007016 ORTHO05D008847 1.7e-76 290.0 223 69.1
Ca_24467_v3 Cicer arietinum L. HOM05D007016 ORTHO05D008847 5.6e-75 285.0 208 70.7
LjContig00222g0018079 Lotus japonicus HOM05D007016 ORTHO05D008847 2.2e-71 273.1 235 62.1
Prupe.5G128800 Prunus persica HOM05D007016 ORTHO05D008847 3.1e-65 252.7 223 61.4
MD14G1125100 Malus domestica HOM05D007016 ORTHO05D008847 8.9e-65 251.1 235 57.9
Eucgr.D01686 Eucalyptus grandis HOM05D007016 ORTHO05D008847 1.5e-64 250.4 224 58.5
Cfa011932 Carpinus fangiana HOM05D007016 ORTHO05D008847 2.6e-64 249.6 249 56.6
Haze_14080 Corylus avellana HOM05D007016 ORTHO05D008847 4.4e-64 248.8 255 55.7
Dinv12013 Davidia involucrata HOM05D007016 ORTHO05D008847 4.9e-63 245.4 251 55.4
Dinv34693 Davidia involucrata HOM05D007016 ORTHO05D008847 8.4e-63 244.6 251 55.4
Actinidia22202 Actinidia chinensis HOM05D007016 ORTHO05D008847 5.4e-62 241.9 233 56.7
TPR.G38026 Trifolium pratense HOM05D007016 ORTHO05D008847 5.4e-62 241.9 175 72.0
GSVIVG01019642001 Vitis vinifera HOM05D007016 ORTHO05D008847 9.3e-62 241.1 256 53.1
FAN08G2008 Fragaria x ananassa HOM05D007016 ORTHO05D008847 4.6e-61 238.8 204 59.8
FAN04G1313 Fragaria x ananassa HOM05D007016 ORTHO05D008847 6.0e-61 238.4 204 59.3
TWI15G0571 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 7.8e-61 238.0 212 58.5
Lalb_Chr09g0320381 Lupinus albus HOM05D007016 ORTHO05D008847 5.1e-60 235.3 227 54.2
Rhsim02G0251600 Rhododendron simsii HOM05D007016 ORTHO05D008847 6.6e-60 235.0 250 53.2
MD06G1117700 Malus domestica HOM05D007016 ORTHO05D008847 1.5e-59 233.8 175 65.1
Ciclev10021806m.g Citrus clementina HOM05D007016 ORTHO05D008847 1.9e-59 233.4 219 56.2
PGR031G1249 Punica granatum HOM05D007016 ORTHO05D008847 1.9e-59 233.4 211 57.8
Gorai.003G076500 Gossypium raimondii HOM05D007016 ORTHO05D008847 3.3e-59 232.6 212 58.5
TAR375G0929 Trochodendron aralioides HOM05D007016 ORTHO05D008847 7.3e-59 231.5 233 56.7
FvH4_5g11000 Fragaria vesca HOM05D007016 ORTHO05D008847 9.6e-59 231.1 204 58.8
QL02p028324 Quercus lobata HOM05D007016 ORTHO05D008847 1.3e-58 230.7 211 56.9
Thecc.03G221900 Theobroma cacao HOM05D007016 ORTHO05D008847 1.6e-58 230.3 227 55.1
Duzib084G0025 Durio zibethinus HOM05D000458 ORTHO05D000951 8.1e-58 228.0 221 54.8
Cc08_g16690 Coffea canephora HOM05D007016 ORTHO05D008847 1.4e-57 227.3 224 54.9
Migut.O00796 Erythranthe guttata HOM05D007016 ORTHO05D008847 1.8e-57 226.9 225 57.8
CiPaw.12G078100 Carya illinoinensis HOM05D007016 ORTHO05D008847 4.0e-57 225.7 253 52.6
Manes.02G003500 Manihot esculenta HOM05D007016 ORTHO05D008847 5.3e-57 225.3 230 52.6
Nitab4.5_0004251g0050 Nicotiana tabacum HOM05D007016 ORTHO05D008847 5.3e-57 225.3 210 57.6
TWI81G0911 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 5.3e-57 225.3 207 58.0
vmacro11507 Vaccinium macrocarpon HOM05D007016 ORTHO05D008847 1.2e-56 224.2 213 54.5
Sabra03G0106200 Salix brachista HOM05D007016 ORTHO05D008847 4.5e-56 222.2 246 50.8
Oeu022037.1 Olea europaea HOM05D007016 ORTHO05D008847 1.3e-55 220.7 244 52.0
arahy.Tifrunner.gnm1.ann1.HM96ZH Arachis hypogaea HOM05D007016 ORTHO05D008847 1.7e-55 220.3 116 94.8
Potri.003G146100 Populus trichocarpa HOM05D007016 ORTHO05D008847 1.7e-55 220.3 250 48.8
Duzib205G1809 Durio zibethinus HOM05D007016 ORTHO05D008847 2.9e-55 219.5 209 56.5
Atru.chr9.1899 Acer truncatum HOM05D007016 ORTHO05D008847 6.4e-55 218.4 209 56.9
Haze_09164 Corylus avellana HOM05D007016 ORTHO05D008847 6.4e-55 218.4 255 50.2
RcHm_v2.0_Chr7g0186811 Rosa chinensis HOM05D007016 ORTHO05D008847 6.4e-55 218.4 208 54.3
Peaxi162Scf00074g00350 Petunia axillaris HOM05D000458 ORTHO05D000951 1.1e-54 217.6 206 55.3
Sed0027229 Sechium edule HOM05D007016 ORTHO05D008847 1.1e-54 217.6 264 49.2
Potri.001G084600 Populus trichocarpa HOM05D007016 ORTHO05D008847 1.4e-54 217.2 201 55.2
COL.COLO4_10789 Corchorus olitorius HOM05D000458 ORTHO05D000951 2.4e-54 216.5 207 55.1
MBI04_g33411_MAGBIO Magnolia biondii HOM05D007016 ORTHO05D008847 3.2e-54 216.1 211 53.6
CsaV3_5G001730 Cucumis sativus L. HOM05D007016 ORTHO05D008847 1.2e-53 214.2 265 49.4
AUR62007045 Chenopodium quinoa HOM05D007016 ORTHO05D008847 1.6e-53 213.8 260 46.9
ClCG01G001570 Citrullus lanatus HOM05D007016 ORTHO05D008847 2.1e-53 213.4 262 49.6
PSO339G4063 Papaver somniferum HOM05D007016 ORTHO05D008847 2.1e-53 213.4 212 55.7
DCAR_006538 Daucus carota HOM05D007016 ORTHO05D008847 2.7e-53 213.0 206 53.4
ECA246G5308 Erigeron canadensis HOM05D007016 ORTHO05D008847 2.7e-53 213.0 215 51.6
PSO339G2192 Papaver somniferum HOM05D007016 ORTHO05D008847 3.5e-53 212.6 213 55.4
FAN18G1330 Fragaria x ananassa HOM05D007016 ORTHO05D008847 4.6e-53 212.2 242 49.6
HanXRQChr06g0166831 Helianthus annuus HOM05D007016 ORTHO05D008847 7.9e-53 211.5 225 51.6
Aqoxy5G04260 Aquilegia oxysepala HOM05D007016 ORTHO05D008847 1.8e-52 210.3 250 47.6
Haze_09158 Corylus avellana HOM05D007016 ORTHO05D008847 1.8e-52 210.3 255 50.2
Gohir.A02G097900 Gossypium hirsutum HOM05D007016 ORTHO05D008847 1.5e-51 207.2 253 48.2
SGA_v2.0_scaffold314G48366 Striga asiatica HOM05D007016 ORTHO05D008847 1.9e-51 206.8 166 62.0
Sc01g0010620 Simmondsia chinensis HOM05D007016 ORTHO05D008847 9.6e-51 204.5 219 50.7
ATR0620G109 Amborella trichopoda HOM05D007016 ORTHO05D008847 3.7e-50 202.6 196 55.6
FAN13G1076 Fragaria x ananassa HOM05D007016 ORTHO05D008847 1.1e-49 201.1 194 55.7
EL10Ac5g12439 Beta vulgaris HOM05D007016 ORTHO05D008847 1.4e-49 200.7 213 51.6
MELO3C005780.2 Cucumis melo HOM05D007016 ORTHO05D008847 1.4e-49 200.7 255 48.2
A07p21030 Brassica napus HOM05D003273 ORTHO05D004023 2.4e-49 199.9 184 54.9
Nn3g18888 Nelumbo nucifera HOM05D007016 ORTHO05D008847 6.9e-49 198.4 266 45.9
Gohir.D03G085700 Gossypium hirsutum HOM05D007016 ORTHO05D008847 1.2e-48 197.6 212 52.4
Thhalv10027936m.g Eutrema salsugineum HOM05D007016 ORTHO05D008847 2.6e-48 196.4 196 51.0
BraA07t29790Z Brassica rapa HOM05D003273 ORTHO05D004023 5.8e-48 195.3 184 53.8
Nitab4.5_0007063g0030 Nicotiana tabacum HOM05D007016 ORTHO05D008847 9.9e-48 194.5 257 45.9
PGSC0003DMG400012122 Solanum tuberosum HOM05D007016 ORTHO05D008847 9.9e-48 194.5 213 51.6
HPP92_022341 Vanilla planifolia HOM05D007016 ORTHO05D008847 1.7e-47 193.7 185 54.1
HPP92_022355 Vanilla planifolia HOM05D007016 ORTHO05D008847 1.7e-47 193.7 185 54.1
HanXRQChr17g0534751 Helianthus annuus HOM05D007016 ORTHO05D008847 2.2e-47 193.4 176 55.1
Zm00001eb428160 Zea mays HOM05D007016 ORTHO05D008847 3.8e-47 192.6 219 48.4
Lsat_1_v5_gn_3_13941 Lactuca sativa HOM05D007016 ORTHO05D008847 6.4e-47 191.8 213 50.2
Aa31LG9G230 Aethionema arabicum HOM05D007016 ORTHO05D008847 1.4e-46 190.7 238 50.4
THA.LOC104809306 Tarenaya hassleriana HOM05D007016 ORTHO05D008847 1.4e-46 190.7 214 51.4
Os04g0585600 Oryza sativa ssp. japonica HOM05D007016 ORTHO05D008847 1.9e-46 190.3 219 47.0
Ah.07g197890 Amaranthus hybridus HOM05D007016 ORTHO05D008847 5.5e-46 188.7 262 45.8
MSTRG.15575 Avicennia marina HOM05D007016 ORTHO05D008847 7.1e-46 188.3 233 51.5
CARHR212600 Cardamine hirsuta HOM05D007016 ORTHO05D008847 9.3e-46 188.0 205 52.7
AL7G47260 Arabidopsis lyrata HOM05D007016 ORTHO05D008847 1.6e-45 187.2 210 50.5
Sopen08g031240 Solanum pennellii HOM05D007016 ORTHO05D008847 2.7e-45 186.4 227 49.3
BcaC02g08900 Brassica carinata HOM05D003273 ORTHO05D004023 3.5e-45 186.0 153 59.5
Solyc08g083030.4 Solanum lycopersicum HOM05D007016 ORTHO05D008847 4.6e-45 185.7 227 49.3
BcaC08g44572 Brassica carinata HOM05D003273 ORTHO05D004023 6.0e-45 185.3 184 54.3
Carub.0007s3342 Capsella rubella HOM05D007016 ORTHO05D008847 6.0e-45 185.3 153 59.5
AT5G41960 Arabidopsis thaliana HOM05D007016 ORTHO05D008847 7.9e-45 184.9 180 53.3
Cpa.g.sc175.19 Carica papaya HOM05D007016 ORTHO05D008847 2.3e-44 183.3 187 53.5
BcaB06g27684 Brassica carinata HOM05D003273 ORTHO05D004023 3.0e-44 183.0 166 56.0
A04p15110 Brassica napus HOM05D003273 ORTHO05D005100 3.0e-44 183.0 135 63.7
C04p49340 Brassica napus HOM05D003273 ORTHO05D005100 3.9e-44 182.6 137 62.8
BolC4t26521H Brassica oleracea HOM05D003273 ORTHO05D004023 3.9e-44 182.6 137 62.8
BraA04t17152Z Brassica rapa HOM05D003273 ORTHO05D005100 3.9e-44 182.6 133 64.7
SEGI_36842 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 3.3e-43 179.5 215 47.4
Sp7g00170 Schrenkiella parvula HOM05D007016 ORTHO05D008847 4.3e-43 179.1 145 60.7
C06p20380 Brassica napus HOM05D003273 ORTHO05D004023 5.6e-43 178.7 187 52.4
CAN.G567.80 Capsicum annuum HOM05D007016 ORTHO05D008847 9.6e-43 177.9 192 50.5
Lsat_1_v5_gn_3_14061 Lactuca sativa HOM05D007016 ORTHO05D008847 4.0e-41 172.6 218 45.4
arahy.Tifrunner.gnm1.ann1.PIY4C5 Arachis hypogaea HOM05D007016 ORTHO05D008847 5.3e-41 172.2 87 95.4
AUR62019909 Chenopodium quinoa HOM05D007016 ORTHO05D008847 6.5e-39 165.2 254 42.1
unitig_62.g23644 Utricularia gibba HOM05D007016 ORTHO05D008847 4.6e-37 159.1 225 43.1
Pp3c14_22240 Physcomitrium patens HOM05D007016 ORTHO05D008847 1.9e-35 153.7 119 60.5
Mapoly0080s0071 Marchantia polymorpha HOM05D007016 ORTHO05D008847 5.7e-35 152.1 122 56.6
MD16G1274000 Malus domestica HOM05D007016 ORTHO05D008847 1.8e-33 147.1 86 75.6
Psat2g187480 Pisum sativum HOM05D007016 ORTHO05D008847 9.0e-33 144.8 90 75.6
BolC6t37216H Brassica oleracea HOM05D007016 ORTHO05D008847 2.0e-32 143.7 184 45.7
AagrBONN_evm.TU.Sc2ySwM_117.1459 Anthoceros agrestis HOM05D007016 ORTHO05D008847 4.5e-32 142.5 126 51.6
SMO164G0130 Selaginella moellendorffii HOM05D007016 ORTHO05D008847 2.9e-31 139.8 115 54.8
CSS0028177 Camellia sinensis var. sinensis HOM05D007016 ORTHO05D008847 1.6e-29 134.0 223 39.5
Nitab4.5_0000051g0070 Nicotiana tabacum HOM05D007016 ORTHO05D008847 1.9e-27 127.1 139 48.2
CDE07G1000 Ceratophyllum demersum HOM05D007016 ORTHO05D008847 3.7e-26 122.9 141 46.1
CBR_g26222 Chara braunii HOM05D007016 ORTHO05D008847 3.7e-26 122.9 145 45.5
SEGI_07436 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 5.5e-22 109.0 84 61.9
CANSAT21G1603 Cannabis sativa HOM05D007016 ORTHO05D008847 8.2e-18 95.1 267 33.3
Hund14199 Selenicereus undatus HOM05D007016 ORTHO05D008847 1.0e-15 88.2 119 44.5
TPR.G22067 Trifolium pratense HOM05D007016 ORTHO05D008847 3.7e-10 69.7 61 62.3


User provided reference genes

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