Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.6H51DS Arachis hypogaea HOM05D006284 ORTHO05D007793 3.9e-78 294.7 142 100.0
arahy.Tifrunner.gnm1.ann1.W3SBYC Arachis hypogaea HOM05D006284 ORTHO05D007793 2.8e-76 288.5 142 98.6
Psat7g217680 Pisum sativum HOM05D006284 ORTHO05D007793 7.1e-64 247.3 141 83.7
Ca_19180_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 4.6e-63 244.6 141 83.0
Ca_31183_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 4.6e-63 244.6 141 83.0
Medtr4g063500 Medicago truncatula HOM05D006284 ORTHO05D007793 4.6e-63 244.6 142 83.1
CiPaw.13G097000 Carya illinoinensis HOM05D006284 ORTHO05D007793 8.7e-62 240.4 142 81.0
VMungo1127G1430 Vigna mungo HOM05D006284 ORTHO05D007793 8.7e-62 240.4 139 81.3
Lalb_Chr01g0003741 Lupinus albus HOM05D006284 ORTHO05D007793 1.1e-61 240.0 139 81.3
Phvul.011G065500 Phaseolus vulgaris HOM05D006284 ORTHO05D007793 1.9e-61 239.2 139 81.3
Glyma.12G064500 Glycine max HOM05D006284 ORTHO05D007793 2.5e-61 238.8 139 80.6
QL01p032751 Quercus lobata HOM05D006284 ORTHO05D007793 4.3e-61 238.0 141 80.9
Haze_24061 Corylus avellana HOM05D006284 ORTHO05D007793 4.8e-60 234.6 142 78.9
Lj3g0026697 Lotus japonicus HOM05D006284 ORTHO05D007793 1.8e-59 232.6 136 83.1
FAN11G1150 Fragaria x ananassa HOM05D006284 ORTHO05D007793 4.1e-59 231.5 140 79.3
FAN21G0749 Fragaria x ananassa HOM05D006284 ORTHO05D007793 4.1e-59 231.5 140 79.3
FAN16G2200 Fragaria x ananassa HOM05D006284 ORTHO05D007793 9.0e-59 230.3 140 78.6
Atru.chr3.3846 Acer truncatum HOM05D006284 ORTHO05D007793 1.2e-58 229.9 139 80.6
AT1G07645 Arabidopsis thaliana HOM05D006284 ORTHO05D007793 2.6e-58 228.8 137 81.8
RcHm_v2.0_Chr5g0063801 Rosa chinensis HOM05D006284 ORTHO05D007793 2.6e-58 228.8 140 79.3
EL10Ac7g15985 Beta vulgaris HOM05D006284 ORTHO05D007793 3.4e-58 228.4 139 77.7
GSVIVG01025000001 Vitis vinifera HOM05D006284 ORTHO05D007793 3.4e-58 228.4 140 78.6
Eucgr.B02382 Eucalyptus grandis HOM05D006284 ORTHO05D007793 1.0e-57 226.9 138 79.0
Dinv03613 Davidia involucrata HOM05D006284 ORTHO05D007793 1.3e-57 226.5 139 78.4
Aa31sc281G30 Aethionema arabicum HOM05D006284 ORTHO05D007793 2.2e-57 225.7 139 78.4
BcaC07g42493 Brassica carinata HOM05D006284 ORTHO05D007793 2.2e-57 225.7 137 81.0
Duzib168G1259 Durio zibethinus HOM05D006284 ORTHO05D007793 2.9e-57 225.3 143 76.2
MD11G1144900 Malus domestica HOM05D006284 ORTHO05D007793 6.5e-57 224.2 138 76.1
Cpa.g.sc190.6 Carica papaya HOM05D006284 ORTHO05D007793 8.5e-57 223.8 142 76.8
Thhalv10009069m.g Eutrema salsugineum HOM05D006284 ORTHO05D007793 8.5e-57 223.8 137 79.6
AL1G17850 Arabidopsis lyrata HOM05D006284 ORTHO05D007793 1.4e-56 223.0 137 79.6
BcaC07g41981 Brassica carinata HOM05D006284 ORTHO05D007793 1.4e-56 223.0 137 80.3
BcaC07g42491 Brassica carinata HOM05D006284 ORTHO05D007793 1.4e-56 223.0 137 80.3
C08p50410 Brassica napus HOM05D006284 ORTHO05D007793 1.4e-56 223.0 137 80.3
BolC8t52569H Brassica oleracea HOM05D006284 ORTHO05D007793 1.4e-56 223.0 137 80.3
Hma1.2p1_1897F.1_g306861 Hydrangea macrophylla HOM05D006284 ORTHO05D007793 1.9e-56 222.6 134 78.4
Potri.001G237500 Populus trichocarpa HOM05D006284 ORTHO05D007793 1.9e-56 222.6 143 76.2
Sabra16G0143200 Salix brachista HOM05D006284 ORTHO05D007793 1.9e-56 222.6 143 77.6
A09p66230 Brassica napus HOM05D006284 ORTHO05D007793 2.5e-56 222.2 137 80.3
BraA06t23686Z Brassica rapa HOM05D006284 ORTHO05D007793 2.5e-56 222.2 141 79.4
Carub.0001s0699 Capsella rubella HOM05D006284 ORTHO05D007793 2.5e-56 222.2 137 78.8
A06p04820 Brassica napus HOM05D006284 ORTHO05D007793 3.2e-56 221.9 138 80.4
CANSAT54G2008 Cannabis sativa HOM05D006284 ORTHO05D007793 3.2e-56 221.9 143 74.8
ECA247G3393 Erigeron canadensis HOM05D006284 ORTHO05D007793 3.2e-56 221.9 137 78.8
C05p05670 Brassica napus HOM05D006284 ORTHO05D007793 4.2e-56 221.5 138 80.4
BolC5t29337H Brassica oleracea HOM05D006284 ORTHO05D007793 4.2e-56 221.5 138 80.4
BraA09t41961Z Brassica rapa HOM05D006284 ORTHO05D007793 9.3e-56 220.3 137 79.6
HanXRQChr15g0493271 Helianthus annuus HOM05D006284 ORTHO05D007793 9.3e-56 220.3 136 77.9
Thecc.09G324900 Theobroma cacao HOM05D006284 ORTHO05D007793 9.3e-56 220.3 143 75.5
vmacro14530 Vaccinium macrocarpon HOM05D006284 ORTHO05D007793 9.3e-56 220.3 139 75.5
PGR102G0171 Punica granatum HOM05D006284 ORTHO05D007793 1.6e-55 219.5 142 75.4
ClCG02G020310 Citrullus lanatus HOM05D006284 ORTHO05D007793 2.7e-55 218.8 142 74.6
Aqoxy4G02964 Aquilegia oxysepala HOM05D006284 ORTHO05D007793 3.6e-55 218.4 141 73.0
Prupe.6G080800 Prunus persica HOM05D006284 ORTHO05D007793 3.6e-55 218.4 136 74.3
AUR62009602 Chenopodium quinoa HOM05D006284 ORTHO05D007793 4.6e-55 218.0 139 74.1
CARHR007450 Cardamine hirsuta HOM05D006284 ORTHO05D007793 7.9e-55 217.2 135 77.0
MSTRG.15272 Avicennia marina HOM05D006284 ORTHO05D007793 1.8e-54 216.1 136 77.2
Gohir.A05G097100 Gossypium hirsutum HOM05D006284 ORTHO05D007793 1.8e-54 216.1 143 72.7
Rhsim01G0226200 Rhododendron simsii HOM05D006284 ORTHO05D007793 1.8e-54 216.1 139 75.5
SalBow5G5166 Salvia bowleyana HOM05D006284 ORTHO05D007793 1.8e-54 216.1 136 77.9
Sp1g06380 Schrenkiella parvula HOM05D006284 ORTHO05D007793 1.8e-54 216.1 137 77.4
Gorai.009G100800 Gossypium raimondii HOM05D006284 ORTHO05D007793 2.3e-54 215.7 143 72.0
Nitab4.5_0001304g0050 Nicotiana tabacum HOM05D006284 ORTHO05D007793 3.0e-54 215.3 137 73.7
MELO3C013690.2 Cucumis melo HOM05D006284 ORTHO05D007793 3.9e-54 214.9 142 72.5
BcaC07g42490 Brassica carinata HOM05D006284 ORTHO05D007793 5.1e-54 214.5 138 79.0
Lsat_1_v5_gn_5_183840 Lactuca sativa HOM05D006284 ORTHO05D007793 5.1e-54 214.5 136 77.2
Sed0023805 Sechium edule HOM05D006284 ORTHO05D007793 5.1e-54 214.5 139 73.4
Sc06g0008270 Simmondsia chinensis HOM05D006284 ORTHO05D007793 6.7e-54 214.2 135 75.6
TAR623G0100 Trochodendron aralioides HOM05D006284 ORTHO05D007793 8.7e-54 213.8 136 75.7
DCAR_015613 Daucus carota HOM05D006284 ORTHO05D007793 1.5e-53 213.0 137 75.2
COL.COLO4_18479 Corchorus olitorius HOM05D006284 ORTHO05D007793 1.9e-53 212.6 143 72.0
Manes.11G132300 Manihot esculenta HOM05D006284 ORTHO05D007793 1.9e-53 212.6 141 73.8
Oeu056746.1 Olea europaea HOM05D006284 ORTHO05D007793 1.9e-53 212.6 139 73.4
CAN.G394.47 Capsicum annuum HOM05D006284 ORTHO05D007793 4.3e-53 211.5 135 73.3
Sopen06g032410 Solanum pennellii HOM05D006284 ORTHO05D007793 5.7e-53 211.1 136 72.8
PGSC0003DMG400030315 Solanum tuberosum HOM05D006284 ORTHO05D007793 5.7e-53 211.1 136 73.5
CsaV3_6G017010 Cucumis sativus L. HOM05D006284 ORTHO05D007793 7.4e-53 210.7 142 71.1
Solyc06g075990.4 Solanum lycopersicum HOM05D006284 ORTHO05D007793 9.7e-53 210.3 135 72.6
Actinidia33860 Actinidia chinensis HOM05D006284 ORTHO05D007793 1.3e-52 209.9 138 73.9
Nitab4.5_0001838g0030 Nicotiana tabacum HOM05D006284 ORTHO05D007793 1.3e-52 209.9 137 71.5
AUR62001816 Chenopodium quinoa HOM05D006284 ORTHO05D007793 1.6e-52 209.5 135 73.3
Lsat_1_v5_gn_9_22581 Lactuca sativa HOM05D006284 ORTHO05D007793 2.2e-52 209.1 136 75.0
Oeu041449.2 Olea europaea HOM05D006284 ORTHO05D007793 2.2e-52 209.1 139 72.7
Migut.L00518 Erythranthe guttata HOM05D006284 ORTHO05D007793 2.8e-52 208.8 136 75.0
PSO339G4936 Papaver somniferum HOM05D006284 ORTHO05D007793 3.7e-52 208.4 136 75.0
THA.LOC104800652 Tarenaya hassleriana HOM05D006284 ORTHO05D007793 1.4e-51 206.5 138 71.0
Gohir.D05G097250 Gossypium hirsutum HOM05D006284 ORTHO05D007793 6.9e-51 204.1 143 67.8
Peaxi162Scf00679g00212 Petunia axillaris HOM05D006284 ORTHO05D007793 6.9e-51 204.1 135 73.3
Os03g0277500 Oryza sativa ssp. japonica HOM05D006284 ORTHO05D007793 1.2e-50 203.4 132 72.7
PSO384G0339 Papaver somniferum HOM05D006284 ORTHO05D007793 1.5e-50 203.0 136 73.5
TWI79G0071 Tripterygium wilfordii HOM05D006284 ORTHO05D007793 4.6e-47 191.4 142 69.0
Migut.L00567 Erythranthe guttata HOM05D006284 ORTHO05D007793 6.1e-47 191.0 128 74.2
SGA_v2.0_scaffold606G53170 Striga asiatica HOM05D006284 ORTHO05D007793 6.1e-47 191.0 131 71.8
SHI00991 Sapria himalayana HOM05D006284 ORTHO05D007793 7.4e-45 184.1 142 63.4
Gohir.A07G096400 Gossypium hirsutum HOM05D006284 ORTHO05D007793 1.2e-42 176.8 162 58.6
Ciclev10029580m.g Citrus clementina HOM05D006284 ORTHO05D007793 8.5e-41 170.6 114 74.6
Zm00001eb012550 Zea mays HOM05D006284 ORTHO05D007793 2.5e-40 169.1 131 61.8
TPR.G10205 Trifolium pratense HOM05D006284 ORTHO05D007793 4.7e-39 164.9 101 79.2
MBI14_g11686_MAGBIO Magnolia biondii HOM05D006284 ORTHO05D007793 1.1e-37 160.2 116 69.0
FvH4_3g35580 Fragaria vesca HOM05D006284 ORTHO05D007793 1.5e-37 159.8 140 62.1
Gorai.001G108700 Gossypium raimondii HOM05D006284 ORTHO05D007793 2.0e-37 159.5 131 64.1
Gohir.D07G100800 Gossypium hirsutum HOM05D006284 ORTHO05D007793 4.4e-37 158.3 157 56.7
SMO165G0091 Selaginella moellendorffii HOM05D006284 ORTHO05D007793 2.2e-36 156.0 132 56.1
Mapoly0004s0146 Marchantia polymorpha HOM05D006284 ORTHO05D007793 4.1e-35 151.8 128 60.2
Lj2A1058T40 Lonicera japonica HOM05D006284 ORTHO05D007793 2.6e-34 149.1 95 75.8
Oeu056758.1 Olea europaea HOM05D006284 ORTHO05D007793 4.5e-34 148.3 96 72.9
CSS0000036 Camellia sinensis var. sinensis HOM05D006284 ORTHO05D007793 5.9e-34 147.9 142 57.0
Oeu033642.1 Olea europaea HOM05D006284 ORTHO05D007793 2.2e-33 146.0 102 68.6
FAN11G3292 Fragaria x ananassa HOM05D006284 ORTHO05D007793 4.2e-32 141.7 140 57.1
DCAR_018897 Daucus carota HOM05D006284 ORTHO05D007793 1.6e-31 139.8 99 64.6
Oeu056739.1 Olea europaea HOM05D006284 ORTHO05D007793 1.8e-30 136.3 135 55.6
Oeu056743.1 Olea europaea HOM05D006284 ORTHO05D007793 5.2e-30 134.8 97 66.0
SEGI_15500 Sequoiadendron giganteum HOM05D006284 ORTHO05D007793 9.4e-24 114.0 96 60.4
AagrBONN_evm.TU.Sc2ySwM_344.4820 Anthoceros agrestis HOM05D006284 ORTHO05D007793 4.0e-22 108.6 96 55.2
Peaxi162Scf00406g00314 Petunia axillaris HOM05D006284 ORTHO05D007793 4.4e-21 105.1 139 44.6
AagrBONN_evm.TU.Sc2ySwM_117.384 Anthoceros agrestis HOM05D006284 ORTHO05D007793 3.7e-20 102.1 129 44.2
FvH4_3g35610 Fragaria vesca HOM05D006284 ORTHO05D007793 1.4e-19 100.1 140 44.3
AagrBONN_evm.TU.Sc2ySwM_344.4822 Anthoceros agrestis HOM05D018382 ORTHO05D001873 7.0e-19 97.8 118 44.1
MD07G1053700 Malus domestica HOM05D006284 ORTHO05D007793 2.0e-18 96.3 62 71.0
MD14G1025700 Malus domestica HOM05D006284 ORTHO05D007793 1.0e-17 94.0 62 71.0
CANSAT21G1079 Cannabis sativa HOM05D002411 ORTHO05D002564 2.5e-16 89.4 68 61.8
Pp3c19_1590 Physcomitrium patens HOM05D006284 ORTHO05D007793 1.4e-14 83.6 126 37.3
TPR.G10968 Trifolium pratense HOM05D006284 ORTHO05D007793 5.2e-14 81.6 45 86.7
Cc01_g12610 Coffea canephora HOM05D006284 ORTHO05D007793 4.4e-13 78.6 44 81.8
Ah.08g219180 Amaranthus hybridus HOM05D006284 ORTHO05D007793 3.3e-08 62.4 41 78.0
ATR0559G308 Amborella trichopoda HOM05D006284 ORTHO05D007793 1.6e-07 60.1 36 72.2
Pp3c13_5750 Physcomitrium patens HOM05D004226 ORTHO05D004842 1.6e-07 60.1 129 36.4
Cc01_g12620 Coffea canephora HOM05D006284 ORTHO05D007793 8.0e-07 57.8 33 78.8


User provided reference genes

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