Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.6G1AZV Arachis hypogaea HOM05D002567 ORTHO05D006538 1.4e-173 612.8 310 100.0
arahy.Tifrunner.gnm1.ann1.B3NEVG Arachis hypogaea HOM05D002567 ORTHO05D006538 6.6e-171 604.0 310 98.7
Glyma.19G208700 Glycine max HOM05D002567 ORTHO05D006538 2.4e-88 329.7 313 64.2
Lalb_Chr15g0078671 Lupinus albus HOM05D002567 ORTHO05D006538 4.1e-88 328.9 325 63.7
Glyma.03G211500 Glycine max HOM05D002567 ORTHO05D006538 2.0e-87 326.6 314 64.6
Ca_09134_v3 Cicer arietinum L. HOM05D002567 ORTHO05D006538 1.3e-81 307.4 313 61.7
Phvul.001G204600 Phaseolus vulgaris HOM05D002567 ORTHO05D006538 3.5e-79 299.3 320 60.0
Medtr7g108390 Medicago truncatula HOM05D002567 ORTHO05D006538 1.8e-72 276.9 314 56.7
TPR.G9283 Trifolium pratense HOM05D002567 ORTHO05D006538 4.1e-72 275.8 316 58.9
Lj1g0027200 Lotus japonicus HOM05D002567 ORTHO05D006538 2.9e-70 269.6 312 57.7
VMungo1383G1965 Vigna mungo HOM05D002567 ORTHO05D006538 1.9e-69 266.9 314 55.7
Psat3g022840 Pisum sativum HOM05D002567 ORTHO05D006538 4.2e-69 265.8 313 56.9
Lalb_Chr18g0047261 Lupinus albus HOM05D002567 ORTHO05D006538 5.9e-63 245.4 322 53.7
QL12p030584 Quercus lobata HOM05D002567 ORTHO05D006538 3.2e-32 143.3 317 38.5
CiPaw.07G103600 Carya illinoinensis HOM05D002567 ORTHO05D006538 3.9e-30 136.3 320 37.2
Thecc.01G293900 Theobroma cacao HOM05D002567 ORTHO05D006538 2.4e-27 127.1 320 33.8
Prupe.8G255600 Prunus persica HOM05D002567 ORTHO05D006538 8.1e-20 102.1 282 37.2
Duzib138G0932 Durio zibethinus HOM05D002567 ORTHO05D006538 5.8e-18 95.9 321 33.3
Potri.014G132800 Populus trichocarpa HOM05D002567 ORTHO05D006538 5.8e-18 95.9 321 33.6
Manes.05G065900 Manihot esculenta HOM05D002567 ORTHO05D006538 7.6e-18 95.5 260 35.0
Gorai.004G088100 Gossypium raimondii HOM05D002567 ORTHO05D006538 1.3e-17 94.7 319 33.5
MD03G1284300 Malus domestica HOM05D002567 ORTHO05D006538 1.4e-16 91.3 280 35.7
Sabra02G0150900 Salix brachista HOM05D002567 ORTHO05D006538 1.9e-16 90.9 326 31.6
Gohir.D08G083700 Gossypium hirsutum HOM05D002567 ORTHO05D006538 2.4e-16 90.5 314 32.2
Gohir.A08G074400 Gossypium hirsutum HOM05D002567 ORTHO05D006538 6.0e-15 85.9 319 32.0
Potri.002G209216 Populus trichocarpa HOM05D002567 ORTHO05D006538 5.1e-14 82.8 337 32.3
Dinv33021 Davidia involucrata HOM05D002567 ORTHO05D006538 1.5e-13 81.3 318 31.1
ClCG09G006200 Citrullus lanatus HOM05D002567 ORTHO05D006538 2.5e-13 80.5 331 35.0
TWI14G0289 Tripterygium wilfordii HOM05D002567 ORTHO05D006538 2.1e-12 77.4 252 30.6
CANSAT25G2282 Cannabis sativa HOM05D002567 ORTHO05D006538 3.6e-12 76.6 336 29.8
Cpa.g.sc9.189 Carica papaya HOM05D002567 ORTHO05D006538 3.1e-11 73.6 318 30.5
Atru.chr5.1232 Acer truncatum HOM05D002567 ORTHO05D006538 2.0e-10 70.9 319 29.5
Ciclev10018617m.g Citrus clementina HOM05D002567 ORTHO05D006538 4.5e-10 69.7 316 30.1
Sed0021907 Sechium edule HOM05D002567 ORTHO05D006538 7.6e-10 68.9 338 30.5
CsaV3_7G028930 Cucumis sativus L. HOM05D002567 ORTHO05D006538 2.2e-09 67.4 336 31.8
GSVIVG01010967001 Vitis vinifera HOM05D002567 ORTHO05D006538 2.9e-09 67.0 355 30.7
Cc01_g20510 Coffea canephora HOM05D002567 ORTHO05D006538 8.4e-09 65.5 130 36.2
MD11G1302000 Malus domestica HOM05D002567 ORTHO05D006538 1.9e-08 64.3 281 31.0
MELO3C016045.2 Cucumis melo HOM05D002567 ORTHO05D006538 7.1e-08 62.4 340 31.5
Migut.D00183 Erythranthe guttata HOM05D002567 ORTHO05D006538 6.0e-07 59.3 130 36.2
Aqoxy5G00702 Aquilegia oxysepala HOM05D002567 ORTHO05D006538 7.9e-07 58.9 197 34.5


User provided reference genes

Program Settings