Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.6FN2NF Arachis hypogaea HOM05D005798 ORTHO05D007269 3.9e-229 797.7 393 100.0
arahy.Tifrunner.gnm1.ann1.1MA0KJ Arachis hypogaea HOM05D005798 ORTHO05D007269 1.2e-225 786.2 393 98.5
Lalb_Chr19g0126311 Lupinus albus HOM05D005798 ORTHO05D007269 1.5e-172 609.8 396 75.8
Lj1g0019008 Lotus japonicus HOM05D005798 ORTHO05D007269 7.0e-170 600.9 396 74.7
Glyma.04G128400 Glycine max HOM05D005798 ORTHO05D007269 6.0e-169 597.8 397 74.8
VMungo1080G0989 Vigna mungo HOM05D005798 ORTHO05D007269 7.8e-169 597.4 396 74.5
Ca_03850_v3 Cicer arietinum L. HOM05D005798 ORTHO05D007269 5.0e-168 594.7 387 75.7
Phvul.005G016200 Phaseolus vulgaris HOM05D005798 ORTHO05D007269 5.0e-168 594.7 394 74.4
Glyma.06G310400 Glycine max HOM05D005798 ORTHO05D007269 3.6e-166 588.6 392 74.0
Psat3g172680 Pisum sativum HOM05D005798 ORTHO05D007269 3.6e-166 588.6 395 72.7
Medtr0103s0100 Medicago truncatula HOM05D005798 ORTHO05D007269 1.1e-165 587.0 397 73.8
CiPaw.13G020800 Carya illinoinensis HOM05D005798 ORTHO05D007269 1.3e-152 543.5 397 66.2
QL04p025438 Quercus lobata HOM05D005798 ORTHO05D007269 5.6e-151 538.1 396 65.7
FAN23G2651 Fragaria x ananassa HOM05D005798 ORTHO05D007269 1.2e-148 530.4 399 62.9
MD07G1086000 Malus domestica HOM05D005798 ORTHO05D007269 1.5e-148 530.0 399 64.4
MD02G1227400 Malus domestica HOM05D005798 ORTHO05D007269 9.9e-148 527.3 399 64.4
FAN26G0835 Fragaria x ananassa HOM05D005798 ORTHO05D007269 2.9e-147 525.8 399 62.2
Ciclev10020482m.g Citrus clementina HOM05D005798 ORTHO05D007269 6.4e-147 524.6 398 64.3
MELO3C006251.2 Cucumis melo HOM05D005798 ORTHO05D007269 4.2e-146 521.9 395 62.8
Thecc.10G001400 Theobroma cacao HOM05D005798 ORTHO05D007269 4.2e-146 521.9 397 63.5
FvH4_1g25731 Fragaria vesca HOM05D005798 ORTHO05D007269 9.3e-146 520.8 399 62.2
ClCG05G002770 Citrullus lanatus HOM05D005798 ORTHO05D007269 1.6e-145 520.0 396 63.4
Prupe.2G112300 Prunus persica HOM05D005798 ORTHO05D007269 4.6e-145 518.5 399 63.2
RcHm_v2.0_Chr1g0343251 Rosa chinensis HOM05D005798 ORTHO05D007269 6.0e-145 518.1 398 62.1
vmacro21093 Vaccinium macrocarpon HOM05D005798 ORTHO05D007269 6.0e-145 518.1 387 65.4
FAN28G0191 Fragaria x ananassa HOM05D005798 ORTHO05D007269 1.0e-144 517.3 401 61.6
Atru.chr5.52 Acer truncatum HOM05D005798 ORTHO05D007269 1.7e-144 516.5 398 63.1
TPR.G30814 Trifolium pratense HOM05D005798 ORTHO05D007269 1.7e-144 516.5 344 74.4
Duzib128G1323 Durio zibethinus HOM05D005798 ORTHO05D007269 6.6e-144 514.6 400 63.0
Potri.001G346900 Populus trichocarpa HOM05D005798 ORTHO05D007269 8.7e-144 514.2 388 64.2
Atru.chr5.24 Acer truncatum HOM05D005798 ORTHO05D007269 1.1e-143 513.8 398 62.8
Cc02_g25760 Coffea canephora HOM05D005798 ORTHO05D007269 1.5e-143 513.5 389 62.5
Gohir.A10G242600 Gossypium hirsutum HOM05D005798 ORTHO05D007269 1.5e-143 513.5 394 63.7
PGR004G0434 Punica granatum HOM05D005798 ORTHO05D007269 1.9e-143 513.1 386 62.2
PGR004G1878 Punica granatum HOM05D005798 ORTHO05D007269 1.9e-143 513.1 386 62.4
Sabra16G0226600 Salix brachista HOM05D005798 ORTHO05D007269 1.9e-143 513.1 388 64.2
Sed0012756 Sechium edule HOM05D005798 ORTHO05D007269 2.5e-143 512.7 395 61.8
Peaxi162Scf01124g00121 Petunia axillaris HOM05D005798 ORTHO05D007269 7.3e-143 511.1 394 62.2
CSS0042045 Camellia sinensis var. sinensis HOM05D005798 ORTHO05D007269 1.6e-142 510.0 396 63.6
CsaV3_3G010280 Cucumis sativus L. HOM05D005798 ORTHO05D007269 1.6e-142 510.0 394 61.7
TWI59G0898 Tripterygium wilfordii HOM05D005798 ORTHO05D007269 1.6e-142 510.0 386 64.0
Gorai.011G295600 Gossypium raimondii HOM05D005798 ORTHO05D007269 2.1e-142 509.6 395 63.8
PGSC0003DMG400001703 Solanum tuberosum HOM05D005798 ORTHO05D007269 2.8e-142 509.2 389 63.8
Manes.05G060100 Manihot esculenta HOM05D005798 ORTHO05D007269 4.8e-142 508.4 391 64.7
THA.LOC104817171 Tarenaya hassleriana HOM05D005798 ORTHO05D007269 1.1e-141 507.3 395 62.0
Sopen01g035220 Solanum pennellii HOM05D005798 ORTHO05D007269 4.0e-141 505.4 389 63.2
Eucgr.D01150 Eucalyptus grandis HOM05D005798 ORTHO05D007269 5.3e-141 505.0 386 63.0
Gohir.D10G254600 Gossypium hirsutum HOM05D005798 ORTHO05D007269 1.5e-140 503.4 395 63.3
CAN.G1480.2 Capsicum annuum HOM05D005798 ORTHO05D007269 3.4e-140 502.3 397 62.0
CANSAT21G0894 Cannabis sativa HOM05D005798 ORTHO05D007269 4.5e-140 501.9 392 62.8
Solyc01g088390.3 Solanum lycopersicum HOM05D005798 ORTHO05D007269 1.3e-139 500.4 389 62.5
Nitab4.5_0013532g0010 Nicotiana tabacum HOM05D005798 ORTHO05D007269 4.9e-139 498.4 395 61.5
Nitab4.5_0009219g0010 Nicotiana tabacum HOM05D005798 ORTHO05D007269 1.4e-138 496.9 395 61.8
Hund17139 Selenicereus undatus HOM05D005798 ORTHO05D007269 1.4e-138 496.9 386 64.2
AUR62031252 Chenopodium quinoa HOM05D005798 ORTHO05D007269 4.6e-137 491.9 386 61.7
AUR62027448 Chenopodium quinoa HOM05D005798 ORTHO05D007269 3.0e-136 489.2 386 61.9
EL10Ac8g19272 Beta vulgaris HOM05D005798 ORTHO05D007269 1.9e-135 486.5 385 61.8
Nn2g10726 Nelumbo nucifera HOM05D005798 ORTHO05D007269 3.3e-135 485.7 389 60.9
MSTRG.20650 Avicennia marina HOM05D005798 ORTHO05D007269 4.8e-134 481.9 389 60.7
Sc26g0001830 Simmondsia chinensis HOM05D005798 ORTHO05D007269 1.8e-133 479.9 386 60.4
Oeu024375.1 Olea europaea HOM05D005798 ORTHO05D007269 1.7e-131 473.4 373 61.1
Oeu024376.1 Olea europaea HOM05D005798 ORTHO05D007269 1.7e-131 473.4 373 61.1
AL4G43620 Arabidopsis lyrata HOM05D005798 ORTHO05D007269 2.4e-130 469.5 391 57.5
BcaB02g08835 Brassica carinata HOM05D005798 ORTHO05D007269 2.4e-130 469.5 391 58.6
HanXRQChr16g0519531 Helianthus annuus HOM05D005798 ORTHO05D007269 3.5e-129 465.7 395 58.5
Aa31LG1G26140 Aethionema arabicum HOM05D005798 ORTHO05D007269 1.3e-128 463.8 387 56.8
Migut.B01472 Erythranthe guttata HOM05D005798 ORTHO05D007269 3.0e-128 462.6 389 58.9
BolC4t22185H Brassica oleracea HOM05D005798 ORTHO05D007269 1.9e-127 459.9 395 57.7
CARHR139800 Cardamine hirsuta HOM05D005798 ORTHO05D007269 1.6e-126 456.8 390 57.7
Carub.0004s2713 Capsella rubella HOM05D005798 ORTHO05D007269 3.7e-126 455.7 393 57.8
BcaC02g12292 Brassica carinata HOM05D005798 ORTHO05D007269 4.8e-126 455.3 390 57.9
C04p05550 Brassica napus HOM05D005798 ORTHO05D007269 4.8e-126 455.3 390 57.9
AT2G44580 Arabidopsis thaliana HOM05D005798 ORTHO05D007269 1.1e-125 454.1 392 56.1
ECA234G4178 Erigeron canadensis HOM05D005798 ORTHO05D007269 1.1e-125 454.1 389 57.3
A05p04740 Brassica napus HOM05D005798 ORTHO05D007269 1.8e-125 453.4 390 57.2
BraA05t19450Z Brassica rapa HOM05D005798 ORTHO05D007269 2.4e-125 453.0 390 57.4
Sp4g26670 Schrenkiella parvula HOM05D005798 ORTHO05D007269 2.4e-125 453.0 389 56.8
MBI05_g22048_MAGBIO Magnolia biondii HOM05D005798 ORTHO05D007269 9.0e-125 451.1 388 57.0
PSO782G4885 Papaver somniferum HOM05D005798 ORTHO05D007269 1.0e-123 447.6 391 55.0
PSO017G1219 Papaver somniferum HOM05D005798 ORTHO05D007269 1.3e-123 447.2 391 55.0
Lj7C553T5 Lonicera japonica HOM05D005798 ORTHO05D007269 1.7e-123 446.8 394 57.6
unitig_52.g17377 Utricularia gibba HOM05D005798 ORTHO05D007269 9.3e-122 441.0 392 54.8
PSO063G7295 Papaver somniferum HOM05D005798 ORTHO05D007269 1.6e-121 440.3 401 54.1
Thhalv10001723m.g Eutrema salsugineum HOM05D005798 ORTHO05D007269 2.6e-116 422.9 366 56.6
Ah.14g086050 Amaranthus hybridus HOM05D005798 ORTHO05D007269 6.5e-115 418.3 382 55.0
HPP92_011679 Vanilla planifolia HOM05D005798 ORTHO05D007269 4.2e-114 415.6 392 53.6
Zm00001eb112030 Zea mays HOM05D005798 ORTHO05D007269 1.0e-112 411.0 387 53.7
COL.COLO4_19318 Corchorus olitorius HOM05D005798 ORTHO05D007269 4.3e-111 405.6 313 61.7
Os05g0119600 Oryza sativa ssp. japonica HOM05D005798 ORTHO05D007269 1.6e-110 403.7 376 53.2
SEGI_02869 Sequoiadendron giganteum HOM05D005798 ORTHO05D007269 4.5e-108 395.6 392 48.7
Actinidia33294 Actinidia chinensis HOM05D005798 ORTHO05D007269 2.2e-107 393.3 368 57.9
CDE06G2636 Ceratophyllum demersum HOM05D005798 ORTHO05D007269 6.5e-107 391.7 353 55.2
Nn1g00612 Nelumbo nucifera HOM05D005798 ORTHO05D007269 4.4e-103 379.0 276 65.6
SGA_v2.0_scaffold17G08178 Striga asiatica HOM05D005798 ORTHO05D007269 5.3e-101 372.1 348 53.7
ATR0585G014 Amborella trichopoda HOM05D005798 ORTHO05D007269 2.4e-93 346.7 398 46.5
Rhsim01G0145000 Rhododendron simsii HOM05D005798 ORTHO05D007269 2.9e-91 339.7 375 49.1
Pp3c5_22720 Physcomitrium patens HOM05D005798 ORTHO05D007269 6.5e-91 338.6 389 42.4
Cpa.g.sc3387.1 Carica papaya HOM05D005798 ORTHO05D007269 8.5e-91 338.2 242 66.5
Dinv43575 Davidia involucrata HOM05D005798 ORTHO05D007269 3.3e-87 326.2 266 62.8
AagrBONN_evm.TU.Sc2ySwM_344.2100 Anthoceros agrestis HOM05D005798 ORTHO05D007269 4.5e-84 315.8 367 44.4
TAR375G0847 Trochodendron aralioides HOM05D005798 ORTHO05D007269 1.2e-81 307.8 249 60.6
GSVIVG01018417001 Vitis vinifera HOM05D005798 ORTHO05D007269 9.8e-79 298.1 191 71.2
Mapoly0001s0452 Marchantia polymorpha HOM05D005798 ORTHO05D007269 1.8e-77 293.9 396 39.9
Lsat_1_v5_gn_4_46040 Lactuca sativa HOM05D005798 ORTHO05D007269 1.9e-66 257.3 192 63.0
Actinidia21608 Actinidia chinensis HOM05D005798 ORTHO05D007269 8.0e-65 251.9 159 69.8
Nn3g19112 Nelumbo nucifera HOM05D005798 ORTHO05D007269 7.8e-60 235.3 250 49.2
Prupe.2G112400 Prunus persica HOM05D005798 ORTHO05D007269 1.1e-53 214.9 198 54.5
Nn3g19416 Nelumbo nucifera HOM05D005798 ORTHO05D007269 1.3e-51 208.0 160 61.2
Nn1g07358 Nelumbo nucifera HOM05D005798 ORTHO05D007269 1.5e-50 204.5 190 56.3
Haze_02923 Corylus avellana HOM05D005798 ORTHO05D007269 4.0e-48 196.4 194 55.2
Peaxi162Scf00417g00029 Petunia axillaris HOM05D005798 ORTHO05D007269 5.2e-48 196.1 237 43.9
GSVIVG01018418001 Vitis vinifera HOM05D005798 ORTHO05D007269 3.2e-45 186.8 148 62.8
Nn1g07357 Nelumbo nucifera HOM05D005798 ORTHO05D007269 1.5e-42 177.9 135 59.3
Dinv43574 Davidia involucrata HOM05D005798 ORTHO05D007269 9.5e-42 175.3 110 72.7
HanXRQChr12g0366931 Helianthus annuus HOM05D005798 ORTHO05D007269 1.6e-41 174.5 241 42.7
CBR_g39622 Chara braunii HOM05D000017 ORTHO05D000013 1.8e-40 171.0 434 29.3
Cre16.g684155 Chlamydomonas reinhardtii HOM05D005798 ORTHO05D007269 2.4e-40 170.6 413 29.1
Prupe.2G112500 Prunus persica HOM05D005798 ORTHO05D007269 5.2e-40 169.5 149 59.1
CAN.G195.32 Capsicum annuum HOM05D005798 ORTHO05D007269 3.4e-39 166.8 169 49.1
Atru.chr5.133 Acer truncatum HOM05D005798 ORTHO05D007269 1.4e-37 161.4 145 57.9
CAN.G74.39 Capsicum annuum HOM05D005798 ORTHO05D007269 3.5e-36 156.8 143 58.0
Atru.chr5.134 Acer truncatum HOM05D005798 ORTHO05D007269 1.5e-34 151.4 93 74.2
PRCOL_00005399 Prasinoderma coloniale HOM05D005798 ORTHO05D007269 4.3e-34 149.8 366 31.7
CAN.G74.38 Capsicum annuum HOM05D005798 ORTHO05D007269 2.1e-28 131.0 93 69.9
MCO12G177 Micromonas commoda HOM05D005798 ORTHO05D007269 9.6e-26 122.1 458 26.2
Nn3g19415 Nelumbo nucifera HOM05D005798 ORTHO05D007269 6.2e-25 119.4 83 62.7
HanXRQChr07g0198081 Helianthus annuus HOM05D005798 ORTHO05D007269 2.4e-24 117.5 173 40.5
EL10Ac6g13432 Beta vulgaris HOM05D005798 ORTHO05D007269 2.4e-21 107.5 84 56.0
HPP92_011700 Vanilla planifolia HOM05D005798 ORTHO05D007269 3.3e-18 97.1 57 71.9
TAR375G0441 Trochodendron aralioides HOM05D005798 ORTHO05D007269 2.5e-10 70.9 54 59.3
MBI14_g08084_MAGBIO Magnolia biondii HOM05D005798 ORTHO05D007269 9.6e-10 68.9 82 46.3
CAN.G195.33 Capsicum annuum HOM05D005798 ORTHO05D007269 4.8e-09 66.6 72 54.2
HanXRQChr11g0349311 Helianthus annuus HOM05D000428 ORTHO05D011602 1.1e-08 65.5 85 50.6


User provided reference genes

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