Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.6DRS7R Arachis hypogaea HOM05D006256 ORTHO05D007833 4.2e-75 284.6 147 100.0
arahy.Tifrunner.gnm1.ann1.RJ4A7B Arachis hypogaea HOM05D006256 ORTHO05D007833 6.7e-73 277.3 147 98.0
Lj4g0007171 Lotus japonicus HOM05D006256 ORTHO05D007833 7.7e-45 184.1 148 70.3
CiPaw.15G164300 Carya illinoinensis HOM05D006256 ORTHO05D007833 1.4e-43 179.9 150 69.3
Cpa.g.sc199.16 Carica papaya HOM05D006256 ORTHO05D007833 2.1e-42 176.0 148 70.3
Cfa020783 Carpinus fangiana HOM05D006256 ORTHO05D007833 2.7e-42 175.6 152 68.4
COL.COLO4_05401 Corchorus olitorius HOM05D006256 ORTHO05D007833 3.6e-42 175.3 145 69.7
CiPaw.16G106600 Carya illinoinensis HOM05D006256 ORTHO05D007833 4.7e-42 174.9 149 67.8
Glyma.02G206700 Glycine max HOM05D006256 ORTHO05D007833 6.1e-42 174.5 148 71.6
Haze_19139 Corylus avellana HOM05D006256 ORTHO05D007833 5.2e-41 171.4 152 67.8
Prupe.1G102100 Prunus persica HOM05D006256 ORTHO05D007833 8.8e-41 170.6 149 66.4
Phvul.003G153700 Phaseolus vulgaris HOM05D006256 ORTHO05D007833 2.0e-40 169.5 143 70.6
Nn2g12458 Nelumbo nucifera HOM05D006256 ORTHO05D007833 7.4e-40 167.5 126 74.6
VMungo1215G1943 Vigna mungo HOM05D006256 ORTHO05D007833 7.4e-40 167.5 147 69.4
CANSAT11G0095 Cannabis sativa HOM05D006256 ORTHO05D007833 2.2e-39 166.0 150 68.0
Thecc.09G154100 Theobroma cacao HOM05D006256 ORTHO05D007833 2.2e-39 166.0 145 66.9
Manes.14G113600 Manihot esculenta HOM05D006256 ORTHO05D007833 6.3e-39 164.5 153 65.4
Glyma.17G071200 Glycine max HOM05D006256 ORTHO05D007833 1.1e-38 163.7 147 68.0
Potri.018G102700 Populus trichocarpa HOM05D006256 ORTHO05D007833 1.4e-38 163.3 131 71.8
Duzib187G1001 Durio zibethinus HOM05D006256 ORTHO05D007833 1.8e-38 162.9 145 66.9
Aa31LG7G12680 Aethionema arabicum HOM05D006256 ORTHO05D007833 3.1e-38 162.2 146 65.8
C08p39560 Brassica napus HOM05D006256 ORTHO05D007833 5.3e-38 161.4 149 63.1
BolC8t51529H Brassica oleracea HOM05D006256 ORTHO05D007833 5.3e-38 161.4 149 63.1
C04p53670 Brassica napus HOM05D006256 ORTHO05D007833 1.2e-37 160.2 138 65.9
ClCG06G012650 Citrullus lanatus HOM05D006256 ORTHO05D007833 1.2e-37 160.2 150 65.3
MD04G1052200 Malus domestica HOM05D006256 ORTHO05D007833 1.2e-37 160.2 154 63.0
RcHm_v2.0_Chr4g0405501 Rosa chinensis HOM05D006256 ORTHO05D007833 1.2e-37 160.2 149 67.1
MELO3C010199.2 Cucumis melo HOM05D006256 ORTHO05D007833 1.6e-37 159.8 149 65.8
A09p56610 Brassica napus HOM05D006256 ORTHO05D007833 2.0e-37 159.5 153 62.7
BraA09t41052Z Brassica rapa HOM05D006256 ORTHO05D007833 2.0e-37 159.5 153 62.7
CsaV3_1G029200 Cucumis sativus L. HOM05D006256 ORTHO05D007833 2.0e-37 159.5 150 64.7
BolC4t26923H Brassica oleracea HOM05D006256 ORTHO05D007833 2.6e-37 159.1 117 73.5
TAR626G0939 Trochodendron aralioides HOM05D006256 ORTHO05D007833 2.6e-37 159.1 128 69.5
BcaC07g40961 Brassica carinata HOM05D006256 ORTHO05D007833 4.5e-37 158.3 153 62.7
FAN07G0991 Fragaria x ananassa HOM05D006256 ORTHO05D007833 4.5e-37 158.3 146 67.1
TAR383G0166 Trochodendron aralioides HOM05D006256 ORTHO05D007833 4.5e-37 158.3 135 68.1
Eucgr.L01548 Eucalyptus grandis HOM05D006256 ORTHO05D007833 7.7e-37 157.5 139 66.9
FAN17G2907 Fragaria x ananassa HOM05D006256 ORTHO05D007833 7.7e-37 157.5 146 66.4
FAN17G2911 Fragaria x ananassa HOM05D006256 ORTHO05D007833 7.7e-37 157.5 146 66.4
FAN22G0392 Fragaria x ananassa HOM05D006256 ORTHO05D007833 7.7e-37 157.5 143 67.8
Medtr4g130300 Medicago truncatula HOM05D006256 ORTHO05D007833 7.7e-37 157.5 151 66.9
PGR102G0560 Punica granatum HOM05D006256 ORTHO05D007833 1.0e-36 157.1 154 64.3
CDE02G1547 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 2.2e-36 156.0 148 62.8
Sp4g02990 Schrenkiella parvula HOM05D006256 ORTHO05D007833 3.8e-36 155.2 144 62.5
Sed0025015 Sechium edule HOM05D006256 ORTHO05D007833 3.8e-36 155.2 150 64.7
FvH4_4g09690 Fragaria vesca HOM05D006256 ORTHO05D007833 1.1e-35 153.7 144 65.3
Ciclev10009792m.g Citrus clementina HOM05D006256 ORTHO05D007833 1.5e-35 153.3 144 63.9
A04p18400 Brassica napus HOM05D006256 ORTHO05D007833 1.9e-35 152.9 117 71.8
BraA04t17452Z Brassica rapa HOM05D006256 ORTHO05D007833 1.9e-35 152.9 117 71.8
Sabra18G0088200 Salix brachista HOM05D006256 ORTHO05D007833 1.9e-35 152.9 131 69.5
MBI15_g35737_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 5.5e-35 151.4 151 60.9
Eucgr.C02515 Eucalyptus grandis HOM05D006256 ORTHO05D007833 7.2e-35 151.0 139 65.5
THA.LOC104803911 Tarenaya hassleriana HOM05D006256 ORTHO05D007833 7.2e-35 151.0 151 62.3
Atru.chr7.353 Acer truncatum HOM05D006256 ORTHO05D007833 1.6e-34 149.8 148 61.5
Lalb_Chr13g0300681 Lupinus albus HOM05D006256 ORTHO05D007833 2.7e-34 149.1 147 62.6
Gohir.D08G098900 Gossypium hirsutum HOM05D006256 ORTHO05D007833 4.7e-34 148.3 124 70.2
Gorai.004G106500 Gossypium raimondii HOM05D006256 ORTHO05D007833 4.7e-34 148.3 124 70.2
CSS0035436 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 6.1e-34 147.9 151 64.2
CDE05G2121 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 1.0e-33 147.1 116 71.6
Psat7g006560 Pisum sativum HOM05D006256 ORTHO05D007833 1.0e-33 147.1 148 64.2
Thhalv10000362m.g Eutrema salsugineum HOM05D006256 ORTHO05D007833 1.4e-33 146.7 135 64.4
SalBow1G2070 Salvia bowleyana HOM05D006256 ORTHO05D007833 3.0e-33 145.6 149 59.7
Gohir.A08G087800 Gossypium hirsutum HOM05D006256 ORTHO05D007833 5.2e-33 144.8 112 74.1
AT2G24090 Arabidopsis thaliana HOM05D006256 ORTHO05D007833 1.2e-32 143.7 147 60.5
Actinidia38660 Actinidia chinensis HOM05D006256 ORTHO05D007833 2.0e-32 142.9 143 61.5
AL4G14180 Arabidopsis lyrata HOM05D006256 ORTHO05D007833 2.0e-32 142.9 147 59.2
Carub.0004s0326 Capsella rubella HOM05D006256 ORTHO05D007833 2.0e-32 142.9 147 59.2
Dinv43283 Davidia involucrata HOM05D006256 ORTHO05D007833 4.4e-32 141.7 147 61.9
EL10Ac8g18906 Beta vulgaris HOM05D006256 ORTHO05D007833 7.5e-32 141.0 158 57.6
AUR62025373 Chenopodium quinoa HOM05D006256 ORTHO05D007833 7.5e-32 141.0 154 58.4
TWI32G1056 Tripterygium wilfordii HOM05D006256 ORTHO05D007833 9.7e-32 140.6 140 60.0
CARHR118260 Cardamine hirsuta HOM05D006256 ORTHO05D007833 1.7e-31 139.8 152 58.6
Cc06_g14490 Coffea canephora HOM05D006256 ORTHO05D007833 2.8e-31 139.0 118 71.2
PSO063G2398 Papaver somniferum HOM05D006256 ORTHO05D007833 8.2e-31 137.5 152 57.9
PSO170G3639 Papaver somniferum HOM05D006256 ORTHO05D007833 8.2e-31 137.5 157 58.0
AUR62028378 Chenopodium quinoa HOM05D006256 ORTHO05D007833 1.8e-30 136.3 149 57.7
HPP92_010352 Vanilla planifolia HOM05D006256 ORTHO05D007833 2.4e-30 136.0 108 69.4
vmacro06052 Vaccinium macrocarpon HOM05D006256 ORTHO05D007833 5.3e-30 134.8 147 58.5
Hma1.2p1_1084F.1_g255300 Hydrangea macrophylla HOM05D006256 ORTHO05D007833 7.0e-30 134.4 150 57.3
Migut.J01392 Erythranthe guttata HOM05D006256 ORTHO05D007833 9.1e-30 134.0 148 59.5
Oeu010284.1 Olea europaea HOM05D006256 ORTHO05D007833 1.6e-29 133.3 147 55.8
QL02p094215 Quercus lobata HOM05D006256 ORTHO05D007833 3.5e-29 132.1 132 65.9
MSTRG.10713 Avicennia marina HOM05D006256 ORTHO05D007833 4.5e-29 131.7 149 57.7
HanXRQChr12g0357751 Helianthus annuus HOM05D006256 ORTHO05D007833 4.5e-29 131.7 147 57.8
Migut.K00301 Erythranthe guttata HOM05D006256 ORTHO05D007833 7.7e-29 131.0 147 58.5
SEGI_40166 Sequoiadendron giganteum HOM05D006256 ORTHO05D007833 1.0e-28 130.6 161 54.0
Aqoxy7G03320 Aquilegia oxysepala HOM05D006256 ORTHO05D007833 1.3e-28 130.2 106 71.7
Peaxi162Scf00563g00414 Petunia axillaris HOM05D006256 ORTHO05D007833 3.8e-28 128.6 128 60.9
CSS0023303 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 5.0e-28 128.3 123 63.4
HanXRQChr10g0307761 Helianthus annuus HOM05D006256 ORTHO05D007833 5.0e-28 128.3 111 69.4
SGA_v2.0_scaffold222G42778 Striga asiatica HOM05D006256 ORTHO05D007833 6.5e-28 127.9 147 55.1
Gohir.A04G058552 Gossypium hirsutum HOM05D006256 ORTHO05D007833 8.5e-28 127.5 118 65.3
Lsat_1_v5_gn_5_88481 Lactuca sativa HOM05D006256 ORTHO05D007833 8.5e-28 127.5 111 68.5
GSVIVG01012561001 Vitis vinifera HOM05D006256 ORTHO05D007833 1.5e-27 126.7 68 94.1
GSVIVG01012574001 Vitis vinifera HOM05D006256 ORTHO05D007833 4.2e-27 125.2 66 95.5
Os06g0647100 Oryza sativa ssp. japonica HOM05D006256 ORTHO05D007833 7.2e-27 124.4 148 50.7
ECA234G3762 Erigeron canadensis HOM05D006256 ORTHO05D007833 1.2e-26 123.6 111 64.0
Nitab4.5_0001036g0150 Nicotiana tabacum HOM05D006256 ORTHO05D007833 1.6e-26 123.2 122 60.7
Solyc07g006000.3 Solanum lycopersicum HOM05D006256 ORTHO05D007833 1.6e-26 123.2 145 55.2
Hund08959 Selenicereus undatus HOM05D006256 ORTHO05D007833 2.1e-26 122.9 152 53.9
Sopen07g002140 Solanum pennellii HOM05D006256 ORTHO05D007833 2.1e-26 122.9 145 55.2
unitig_748.g7194 Utricularia gibba HOM05D006256 ORTHO05D007833 2.7e-26 122.5 147 55.8
Nitab4.5_0006744g0050 Nicotiana tabacum HOM05D006256 ORTHO05D007833 3.6e-26 122.1 122 60.7
Zm00001eb386680 Zea mays HOM05D006256 ORTHO05D007833 3.6e-26 122.1 111 63.1
PGSC0003DMG400011211 Solanum tuberosum HOM05D006256 ORTHO05D007833 8.0e-26 120.9 145 54.5
BcaC02g08498 Brassica carinata HOM05D006256 ORTHO05D007833 1.0e-25 120.6 138 53.6
MBI15_g42789_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 3.7e-23 112.1 132 53.0
TPR.G24835 Trifolium pratense HOM05D006256 ORTHO05D007833 5.4e-22 108.2 126 58.7
ATR0580G126 Amborella trichopoda HOM05D006256 ORTHO05D007833 2.0e-21 106.3 144 53.5
Dinv42817 Davidia involucrata HOM05D006256 ORTHO05D007833 4.5e-21 105.1 125 58.4
Actinidia33300 Actinidia chinensis HOM05D006256 ORTHO05D007833 1.3e-20 103.6 141 51.8
Ah.09g228670 Amaranthus hybridus HOM05D006256 ORTHO05D007833 2.9e-20 102.4 220 38.6
CBR_g46223 Chara braunii HOM05D006256 ORTHO05D007833 4.2e-19 98.6 76 68.4
Pp3c22_13420 Physcomitrium patens HOM05D006256 ORTHO05D007833 3.6e-18 95.5 115 50.4
Mapoly0027s0042 Marchantia polymorpha HOM05D006256 ORTHO05D007833 1.0e-17 94.0 111 52.3
SMO164G0197 Selaginella moellendorffii HOM05D006256 ORTHO05D007833 1.0e-17 94.0 78 60.3
Rhsim03G0259400 Rhododendron simsii HOM05D006256 ORTHO05D007833 8.9e-17 90.9 61 75.4
CAN.G1190.22 Capsicum annuum HOM05D006256 ORTHO05D007833 2.0e-16 89.7 122 54.9
CSS0026373 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 5.9e-13 78.2 108 53.7
Pp3c21_8680 Physcomitrium patens HOM05D006256 ORTHO05D007833 3.3e-11 72.4 153 37.3
Cfa020782 Carpinus fangiana HOM05D006256 ORTHO05D007833 2.1e-10 69.7 92 53.3
Pp3c21_8670 Physcomitrium patens HOM05D004684 ORTHO05D006904 1.4e-09 67.0 92 48.9
Zm00001eb000270 Zea mays HOM05D006256 ORTHO05D007833 3.4e-08 62.4 48 77.1
PRCOL_00001020 Prasinoderma coloniale HOM05D006256 ORTHO05D007833 2.9e-07 59.3 62 48.4
SGA_v2.0_scaffold12G06024 Striga asiatica HOM05D006256 ORTHO05D007833 4.9e-07 58.5 113 38.9
MCO09G536 Micromonas commoda HOM05D006256 ORTHO05D007833 1.4e-06 57.0 116 34.5


User provided reference genes

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