Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.6A59KD Arachis hypogaea HOM05D006709 ORTHO05D008329 3.8e-51 204.5 101 100.0
arahy.Tifrunner.gnm1.ann1.ZQQY3F Arachis hypogaea HOM05D006709 ORTHO05D008329 5.5e-50 200.7 101 98.0
Glyma.04G014200 Glycine max HOM05D006709 ORTHO05D008329 6.5e-43 177.2 101 82.2
Phvul.009G008700 Phaseolus vulgaris HOM05D006709 ORTHO05D008329 1.6e-41 172.6 101 81.2
VMungo1309G2593 Vigna mungo HOM05D006709 ORTHO05D008329 3.5e-41 171.4 101 79.2
vmacro21761 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 1.8e-40 169.1 96 86.5
Lj1g0007500 Lotus japonicus HOM05D006709 ORTHO05D008329 5.1e-40 167.5 100 80.0
Lalb_Chr04g0257801 Lupinus albus HOM05D006709 ORTHO05D008329 1.5e-39 166.0 97 81.4
Actinidia15528 Actinidia chinensis HOM05D006709 ORTHO05D008329 2.5e-39 165.2 97 82.5
Psat5g008400 Pisum sativum HOM05D006709 ORTHO05D008329 2.5e-39 165.2 101 79.2
Actinidia17082 Actinidia chinensis HOM05D006709 ORTHO05D008329 3.3e-39 164.9 97 81.4
Dinv05492 Davidia involucrata HOM05D006709 ORTHO05D008329 4.3e-39 164.5 96 82.3
Manes.18G001600 Manihot esculenta HOM05D006709 ORTHO05D008329 4.3e-39 164.5 95 82.1
Lalb_Chr03g0035821 Lupinus albus HOM05D006709 ORTHO05D008329 5.7e-39 164.1 97 80.4
TWI56G0059 Tripterygium wilfordii HOM05D006709 ORTHO05D008329 9.6e-39 163.3 101 80.2
Potri.005G257100 Populus trichocarpa HOM05D006709 ORTHO05D008329 1.3e-38 162.9 97 77.3
GSVIVG01013436001 Vitis vinifera HOM05D006709 ORTHO05D008329 1.3e-38 162.9 97 79.4
PGR031G3816 Punica granatum HOM05D006709 ORTHO05D008329 2.1e-38 162.2 101 80.2
Thecc.08G099000 Theobroma cacao HOM05D006709 ORTHO05D008329 4.8e-38 161.0 99 79.8
Cpa.g.sc26.6 Carica papaya HOM05D006709 ORTHO05D008329 6.3e-38 160.6 95 82.1
Ah.11g042070 Amaranthus hybridus HOM05D006709 ORTHO05D008329 8.2e-38 160.2 92 81.5
EL10Ac1g01866 Beta vulgaris HOM05D006709 ORTHO05D008329 8.2e-38 160.2 97 76.3
CSS0027441 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 1.1e-37 159.8 98 79.6
Ca_15382_v3 Cicer arietinum L. HOM05D006709 ORTHO05D008329 1.1e-37 159.8 101 75.2
TPR.G38103 Trifolium pratense HOM05D006709 ORTHO05D008329 1.4e-37 159.5 97 76.3
CSS0014821 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 1.8e-37 159.1 98 79.6
QL02p015873 Quercus lobata HOM05D006709 ORTHO05D008329 1.8e-37 159.1 99 76.8
Ciclev10002952m.g Citrus clementina HOM05D006709 ORTHO05D008329 2.4e-37 158.7 97 78.4
Oeu035869.2 Olea europaea HOM05D006709 ORTHO05D008329 9.0e-37 156.8 96 76.0
ClCG07G009870 Citrullus lanatus HOM05D006709 ORTHO05D008329 1.2e-36 156.4 91 81.3
RcHm_v2.0_Chr7g0216881 Rosa chinensis HOM05D006709 ORTHO05D008329 1.2e-36 156.4 103 75.7
Lj4A4T20 Lonicera japonica HOM05D006709 ORTHO05D008329 1.5e-36 156.0 92 81.5
MELO3C016084.2 Cucumis melo HOM05D006709 ORTHO05D008329 2.0e-36 155.6 90 82.2
Prupe.1G298300 Prunus persica HOM05D006709 ORTHO05D008329 2.0e-36 155.6 101 76.2
Sed0015665 Sechium edule HOM05D006709 ORTHO05D008329 2.0e-36 155.6 96 77.1
Hma1.2p1_0489F.1_g164140 Hydrangea macrophylla HOM05D006709 ORTHO05D008329 2.6e-36 155.2 93 79.6
unitig_37.g13048 Utricularia gibba HOM05D006709 ORTHO05D008329 2.6e-36 155.2 91 78.0
Hund05070 Selenicereus undatus HOM05D006709 ORTHO05D008329 4.5e-36 154.5 92 80.4
CAN.G1330.15 Capsicum annuum HOM05D006709 ORTHO05D008329 5.9e-36 154.1 97 75.3
Duzib151G1059 Durio zibethinus HOM05D006709 ORTHO05D008329 5.9e-36 154.1 97 79.4
Solyc04g082800.3 Solanum lycopersicum HOM05D006709 ORTHO05D008329 5.9e-36 154.1 92 80.4
Sopen04g036440 Solanum pennellii HOM05D006709 ORTHO05D008329 5.9e-36 154.1 92 80.4
Aa31LG9G13520 Aethionema arabicum HOM05D006709 ORTHO05D008329 7.6e-36 153.7 95 75.8
Gohir.A09G212700 Gossypium hirsutum HOM05D006709 ORTHO05D008329 7.6e-36 153.7 96 78.1
Gohir.D09G206300 Gossypium hirsutum HOM05D006709 ORTHO05D008329 7.6e-36 153.7 96 78.1
Gorai.006G230200 Gossypium raimondii HOM05D006709 ORTHO05D008329 7.6e-36 153.7 96 78.1
MBI04_g31214_MAGBIO Magnolia biondii HOM05D006709 ORTHO05D008329 7.6e-36 153.7 92 78.3
FvH4_5g26200 Fragaria vesca HOM05D006709 ORTHO05D008329 1.7e-35 152.5 103 71.8
FAN08G1650 Fragaria x ananassa HOM05D006709 ORTHO05D008329 1.7e-35 152.5 103 71.8
FAN13G1766 Fragaria x ananassa HOM05D006709 ORTHO05D008329 1.7e-35 152.5 103 71.8
Glyma.06G014200 Glycine max HOM05D006709 ORTHO05D008329 1.7e-35 152.5 101 75.2
SalBow7G4607 Salvia bowleyana HOM05D006709 ORTHO05D008329 1.7e-35 152.5 90 82.2
Atru.chr13.44 Acer truncatum HOM05D006709 ORTHO05D008329 5.0e-35 151.0 97 74.2
Haze_22867 Corylus avellana HOM05D006709 ORTHO05D008329 5.0e-35 151.0 91 81.3
MD06G1003100 Malus domestica HOM05D006709 ORTHO05D008329 5.0e-35 151.0 99 76.8
Medtr3g116150 Medicago truncatula HOM05D006709 ORTHO05D008329 5.0e-35 151.0 102 72.5
Nitab4.5_0007096g0020 Nicotiana tabacum HOM05D006709 ORTHO05D008329 6.5e-35 150.6 92 79.3
CANSAT78G0412 Cannabis sativa HOM05D006709 ORTHO05D008329 8.4e-35 150.2 91 78.0
Carub.0004s1522 Capsella rubella HOM05D006709 ORTHO05D008329 8.4e-35 150.2 95 74.7
Sc15g0004050 Simmondsia chinensis HOM05D006709 ORTHO05D008329 1.1e-34 149.8 101 73.3
FAN18G1826 Fragaria x ananassa HOM05D006709 ORTHO05D008329 1.4e-34 149.4 103 70.9
Rhsim06G0002600 Rhododendron simsii HOM05D006709 ORTHO05D008329 1.9e-34 149.1 101 73.3
Duzib212G0839 Durio zibethinus HOM05D006709 ORTHO05D008329 2.5e-34 148.7 98 75.5
Peaxi162Scf00385g00310 Petunia axillaris HOM05D006709 ORTHO05D008329 2.5e-34 148.7 97 74.2
AL4G29260 Arabidopsis lyrata HOM05D006709 ORTHO05D008329 4.2e-34 147.9 95 73.7
ATR0605G117 Amborella trichopoda HOM05D006709 ORTHO05D008329 7.2e-34 147.1 97 75.3
PSO017G0586 Papaver somniferum HOM05D006709 ORTHO05D008329 7.2e-34 147.1 100 76.0
Eucgr.F03607 Eucalyptus grandis HOM05D006709 ORTHO05D008329 1.6e-33 146.0 97 72.2
Thhalv10017474m.g Eutrema salsugineum HOM05D006709 ORTHO05D008329 2.1e-33 145.6 95 72.6
AT2G33585 Arabidopsis thaliana HOM05D006709 ORTHO05D008329 2.7e-33 145.2 97 71.1
Migut.C00352 Erythranthe guttata HOM05D006709 ORTHO05D008329 2.7e-33 145.2 96 71.9
PGSC0003DMG400009925 Solanum tuberosum HOM05D006709 ORTHO05D008329 3.5e-33 144.8 90 77.8
HanXRQChr12g0367591 Helianthus annuus HOM05D006709 ORTHO05D008329 6.1e-33 144.1 94 72.3
Lsat_1_v5_gn_9_48241 Lactuca sativa HOM05D006709 ORTHO05D008329 6.1e-33 144.1 92 76.1
ECA233G3448 Erigeron canadensis HOM05D006709 ORTHO05D008329 7.9e-33 143.7 93 74.2
Sabra05G0199000 Salix brachista HOM05D006709 ORTHO05D008329 7.9e-33 143.7 82 82.9
CARHR127610 Cardamine hirsuta HOM05D006709 ORTHO05D008329 1.8e-32 142.5 92 70.7
BcaB01g03928 Brassica carinata HOM05D006709 ORTHO05D008329 5.1e-32 141.0 92 71.7
BcaC01g05832 Brassica carinata HOM05D006709 ORTHO05D008329 6.7e-32 140.6 95 69.5
C03p21970 Brassica napus HOM05D006709 ORTHO05D008329 6.7e-32 140.6 95 69.5
BolC3t14580H Brassica oleracea HOM05D006709 ORTHO05D008329 6.7e-32 140.6 95 69.5
BraA03t11140Z Brassica rapa HOM05D006709 ORTHO05D008329 6.7e-32 140.6 95 69.5
Nn5g31057 Nelumbo nucifera HOM05D006709 ORTHO05D008329 6.7e-32 140.6 118 64.4
A03p18800 Brassica napus HOM05D006709 ORTHO05D008329 1.5e-31 139.4 95 68.4
Os08g0512900 Oryza sativa ssp. japonica HOM05D006709 ORTHO05D008329 4.3e-31 137.9 97 70.1
TAR628G1717 Trochodendron aralioides HOM05D006709 ORTHO05D008329 7.4e-31 137.1 82 81.7
BolC4t27784H Brassica oleracea HOM05D006709 ORTHO05D008329 9.7e-31 136.7 91 72.5
Lsat_1_v5_gn_8_26041 Lactuca sativa HOM05D006709 ORTHO05D008329 9.7e-31 136.7 101 70.3
BcaB06g28702 Brassica carinata HOM05D006709 ORTHO05D008329 1.6e-30 136.0 91 72.5
CDE05G2376 Ceratophyllum demersum HOM05D006709 ORTHO05D008329 1.6e-30 136.0 97 67.0
C04p63090 Brassica napus HOM05D006709 ORTHO05D008329 2.2e-30 135.6 91 72.5
COL.COLO4_12285 Corchorus olitorius HOM05D006709 ORTHO05D008329 2.2e-30 135.6 90 73.3
Oeu035760.1 Olea europaea HOM05D006709 ORTHO05D008329 2.2e-30 135.6 102 66.7
A04p25850 Brassica napus HOM05D006709 ORTHO05D008329 3.7e-30 134.8 91 72.5
BraA04t18087Z Brassica rapa HOM05D006709 ORTHO05D008329 3.7e-30 134.8 91 72.5
BcaC02g07804 Brassica carinata HOM05D006709 ORTHO05D008329 6.3e-30 134.0 91 71.4
Cc10_g00210 Coffea canephora HOM05D006709 ORTHO05D008329 8.2e-30 133.7 85 77.6
Aqoxy5G00959 Aquilegia oxysepala HOM05D006709 ORTHO05D008329 4.1e-29 131.3 82 76.8
SEGI_16420 Sequoiadendron giganteum HOM05D006709 ORTHO05D008329 1.3e-27 126.3 95 65.3
Sp4g15940 Schrenkiella parvula HOM05D006709 ORTHO05D008329 1.7e-27 125.9 85 69.4
HPP92_015749 Vanilla planifolia HOM05D006709 ORTHO05D008329 2.2e-27 125.6 88 72.7
CiPaw.07G132800 Carya illinoinensis HOM05D006709 ORTHO05D008329 6.5e-27 124.0 80 73.8
Zm00001eb199960 Zea mays HOM05D006709 ORTHO05D008329 1.9e-26 122.5 81 71.6
MSTRG.1007 Avicennia marina HOM05D006709 ORTHO05D008329 3.3e-23 111.7 81 67.9
FAN04G1417 Fragaria x ananassa HOM05D006709 ORTHO05D008329 3.3e-23 111.7 106 59.4
CsaV3_4G008460 Cucumis sativus L. HOM05D006709 ORTHO05D008329 6.3e-22 107.5 64 81.2
BcaC01g05833 Brassica carinata HOM05D006709 ORTHO05D008329 2.0e-20 102.4 87 60.9
AagrBONN_evm.TU.Sc2ySwM_344.3753 Anthoceros agrestis HOM05D006709 ORTHO05D008329 2.6e-20 102.1 85 60.0
Manes.05G128900 Manihot esculenta HOM05D006709 ORTHO05D008329 8.5e-19 97.1 72 63.9
DCAR_016802 Daucus carota HOM05D006709 ORTHO05D008329 7.9e-17 90.5 98 49.0
Mapoly0015s0105 Marchantia polymorpha HOM05D006709 ORTHO05D008329 3.9e-16 88.2 80 52.5
vmacro04272 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 8.8e-16 87.0 112 48.2
SHI07946 Sapria himalayana HOM05D006709 ORTHO05D008329 2.4e-13 79.0 66 63.6
Pp3c1_9780 Physcomitrium patens HOM05D006709 ORTHO05D008329 1.2e-12 76.6 87 49.4
SalBow1G7713 Salvia bowleyana HOM05D006709 ORTHO05D008329 3.5e-12 75.1 44 77.3
DCAR_023021 Daucus carota HOM05D006709 ORTHO05D008329 5.5e-10 67.8 63 52.4
AUR62035175 Chenopodium quinoa HOM05D006709 ORTHO05D008329 9.4e-10 67.0 37 78.4
SalBow8G3647 Salvia bowleyana HOM05D006709 ORTHO05D008329 2.1e-09 65.9 38 76.3
CBR_g27877 Chara braunii HOM05D006709 ORTHO05D008329 6.3e-06 54.3 47 51.1


User provided reference genes

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