Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.680K8M Arachis hypogaea HOM05D007962 ORTHO05D009990 2.5e-273 944.9 492 100.0
arahy.Tifrunner.gnm1.ann1.NS3ZH3 Arachis hypogaea HOM05D007962 ORTHO05D009990 5.8e-238 827.4 492 90.0
Lalb_Chr19g0134511 Lupinus albus HOM05D007962 ORTHO05D009990 2.8e-115 419.9 581 46.1
Glyma.06G271400 Glycine max HOM05D007962 ORTHO05D009990 2.1e-102 377.1 586 44.7
Lj3g0007855 Lotus japonicus HOM05D007962 ORTHO05D009990 3.0e-101 373.2 574 44.9
Phvul.011G137100 Phaseolus vulgaris HOM05D007962 ORTHO05D009990 5.8e-97 359.0 495 47.9
VMungo1127G0274 Vigna mungo HOM05D007962 ORTHO05D009990 3.2e-87 326.6 445 47.2
TPR.G34588 Trifolium pratense HOM05D007962 ORTHO05D009990 5.5e-79 299.3 497 44.7
Psat4g163880 Pisum sativum HOM05D007962 ORTHO05D009990 8.8e-77 292.0 507 43.2
Medtr8g464490 Medicago truncatula HOM05D007962 ORTHO05D009990 1.1e-74 285.0 496 42.9
QL08p017718 Quercus lobata HOM05D007962 ORTHO05D009990 4.8e-59 233.0 503 35.8
COL.COLO4_09484 Corchorus olitorius HOM05D007962 ORTHO05D009990 1.0e-48 198.7 508 33.3
Cfa020503 Carpinus fangiana HOM05D007962 ORTHO05D009990 2.9e-48 197.2 494 32.4
Dinv22362 Davidia involucrata HOM05D007962 ORTHO05D009990 6.5e-48 196.1 502 33.9
RcHm_v2.0_Chr5g0036061 Rosa chinensis HOM05D007962 ORTHO05D009990 2.3e-45 187.6 499 33.5
Haze_09532 Corylus avellana HOM05D007962 ORTHO05D009990 6.8e-45 186.0 505 32.1
FAN16G1594 Fragaria x ananassa HOM05D007962 ORTHO05D009990 1.2e-44 185.3 485 34.2
CiPaw.11G176900 Carya illinoinensis HOM05D007962 ORTHO05D009990 2.6e-44 184.1 491 33.6
Potri.001G407200 Populus trichocarpa HOM05D007962 ORTHO05D009990 9.8e-44 182.2 440 33.9
FAN11G3981 Fragaria x ananassa HOM05D007962 ORTHO05D009990 2.2e-43 181.0 481 34.1
FAN25G2958 Fragaria x ananassa HOM05D007962 ORTHO05D009990 2.8e-43 180.6 481 34.1
Thecc.07G070800 Theobroma cacao HOM05D007962 ORTHO05D009990 1.1e-42 178.7 494 34.0
Duzib213G0567 Durio zibethinus HOM05D007962 ORTHO05D009990 2.4e-42 177.6 528 31.4
MD03G1218200 Malus domestica HOM05D007962 ORTHO05D009990 4.1e-42 176.8 483 34.2
GSVIVG01014440001 Vitis vinifera HOM05D007962 ORTHO05D009990 2.9e-40 170.6 507 31.6
Potri.011G126600 Populus trichocarpa HOM05D007962 ORTHO05D009990 3.8e-40 170.2 445 32.1
Sabra11G0110900 Salix brachista HOM05D007962 ORTHO05D009990 6.6e-40 169.5 458 31.4
FAN21G0493 Fragaria x ananassa HOM05D007962 ORTHO05D009990 1.9e-39 167.9 481 33.3
Dinv08346 Davidia involucrata HOM05D007962 ORTHO05D009990 7.2e-39 166.0 413 35.4
TWI39G0726 Tripterygium wilfordii HOM05D007962 ORTHO05D009990 1.6e-38 164.9 510 32.7
Duzib170G0916 Durio zibethinus HOM05D007962 ORTHO05D009990 1.4e-37 161.8 500 32.4
Gorai.013G165900 Gossypium raimondii HOM05D007962 ORTHO05D009990 3.4e-36 157.1 501 31.3
CSS0037131 Camellia sinensis var. sinensis HOM05D007962 ORTHO05D009990 1.4e-34 151.8 500 30.4
vmacro09563 Vaccinium macrocarpon HOM05D007962 ORTHO05D009990 1.8e-34 151.4 445 33.7
Atru.chr2.2909 Acer truncatum HOM05D007962 ORTHO05D009990 2.4e-34 151.0 455 33.0
Gohir.A13G143400 Gossypium hirsutum HOM05D007962 ORTHO05D009990 1.2e-33 148.7 473 31.9
Manes.15G083000 Manihot esculenta HOM05D007962 ORTHO05D009990 1.2e-33 148.7 503 32.4
Lj1A853T83 Lonicera japonica HOM05D007962 ORTHO05D009990 3.5e-33 147.1 491 30.5
CANSAT11G1510 Cannabis sativa HOM05D007962 ORTHO05D009990 1.7e-32 144.8 494 29.6
TAR627G0526 Trochodendron aralioides HOM05D007962 ORTHO05D009990 2.3e-32 144.4 496 31.5
PGR031G2376 Punica granatum HOM05D007962 ORTHO05D009990 9.5e-31 139.0 505 30.9
Cpa.g.sc80.118 Carica papaya HOM05D007962 ORTHO05D009990 4.7e-30 136.7 249 38.6
RhsimUnG0258400 Rhododendron simsii HOM05D007962 ORTHO05D009990 2.3e-29 134.4 440 31.4
Gohir.D13G148100 Gossypium hirsutum HOM05D007962 ORTHO05D009990 3.4e-28 130.6 390 33.3
Actinidia35282 Actinidia chinensis HOM05D007962 ORTHO05D009990 7.5e-28 129.4 502 29.1
Actinidia18741 Actinidia chinensis HOM05D007962 ORTHO05D009990 2.4e-26 124.4 494 30.2
Oeu006765.1 Olea europaea HOM05D007962 ORTHO05D009990 5.6e-23 113.2 456 27.9
Nitab4.5_0001320g0060 Nicotiana tabacum HOM05D007962 ORTHO05D009990 1.6e-22 111.7 441 30.2
HanXRQChr03g0077201 Helianthus annuus HOM05D007962 ORTHO05D009990 2.1e-22 111.3 271 32.8
Eucgr.F03357 Eucalyptus grandis HOM05D007962 ORTHO05D009990 2.0e-20 104.8 237 35.0
PSO210G4006 Papaver somniferum HOM05D007962 ORTHO05D009990 2.6e-20 104.4 294 32.0
PSO832G2030 Papaver somniferum HOM05D007962 ORTHO05D009990 4.4e-20 103.6 294 30.6
MBI02_g06003_MAGBIO Magnolia biondii HOM05D007962 ORTHO05D009990 1.3e-19 102.1 471 27.2
MSTRG.15202 Avicennia marina HOM05D007962 ORTHO05D009990 2.2e-19 101.3 242 36.8
EL10Ac4g08053 Beta vulgaris HOM05D007962 ORTHO05D009990 8.3e-19 99.4 235 33.2
MD11G1236000 Malus domestica HOM05D007962 ORTHO05D009990 1.9e-18 98.2 409 30.3
Migut.M01857 Erythranthe guttata HOM05D007962 ORTHO05D009990 1.2e-17 95.5 160 40.6
Aqoxy1G03880 Aquilegia oxysepala HOM05D007962 ORTHO05D009990 6.0e-17 93.2 549 26.6
AUR62029307 Chenopodium quinoa HOM05D007962 ORTHO05D009990 6.0e-17 93.2 89 52.8
MELO3C016557.2 Cucumis melo HOM05D007962 ORTHO05D009990 2.3e-16 91.3 463 27.6
Sc16g0006740 Simmondsia chinensis HOM05D007962 ORTHO05D009990 3.0e-16 90.9 262 32.8
Ciclev10010584m.g Citrus clementina HOM05D007962 ORTHO05D009990 1.5e-15 88.6 423 27.2
CsaV3_3G005940 Cucumis sativus L. HOM05D007962 ORTHO05D009990 1.5e-15 88.6 255 31.8
Sabra16G0268600 Salix brachista HOM05D007962 ORTHO05D009990 2.5e-15 87.8 433 25.9
AUR62015596 Chenopodium quinoa HOM05D007962 ORTHO05D009990 1.2e-14 85.5 356 28.9
Nitab4.5_0000207g0280 Nicotiana tabacum HOM05D007962 ORTHO05D009990 2.1e-14 84.7 435 29.0
Nn1g06763 Nelumbo nucifera HOM05D007962 ORTHO05D009990 2.8e-14 84.3 509 25.9
Sopen10g002730 Solanum pennellii HOM05D007962 ORTHO05D009990 6.2e-14 83.2 319 29.5
FvH4_3g21030 Fragaria vesca HOM05D007962 ORTHO05D009990 5.2e-13 80.1 355 27.9
ECA240G4716 Erigeron canadensis HOM05D000200 ORTHO05D001546 1.2e-12 79.0 461 27.3
ClCG10G006460 Citrullus lanatus HOM05D007962 ORTHO05D009990 7.6e-12 76.3 260 30.0
CDE11G0480 Ceratophyllum demersum HOM05D063389 ORTHO05D009990 6.4e-11 73.2 245 27.8
Ah.06g183570 Amaranthus hybridus HOM05D007962 ORTHO05D009990 1.1e-10 72.4 297 28.6
Sed0012704 Sechium edule HOM05D007962 ORTHO05D009990 1.6e-09 68.6 458 27.1
HanXRQChr13g0393921 Helianthus annuus HOM05D003190 ORTHO05D009990 2.7e-09 67.8 97 38.1
Lsat_1_v5_gn_9_95621 Lactuca sativa HOM05D007962 ORTHO05D009990 2.1e-06 58.2 253 26.1
SMO137G0065 Selaginella moellendorffii HOM05D020562 ORTHO05D030110 3.6e-06 57.4 97 37.1


User provided reference genes

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