Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.65RE86 Arachis hypogaea HOM05D004677 ORTHO05D005746 6.0e-94 347.4 169 100.0
arahy.Tifrunner.gnm1.ann1.34K6GT Arachis hypogaea HOM05D004677 ORTHO05D005746 1.1e-39 167.2 156 59.6
arahy.Tifrunner.gnm1.ann1.IJK42W Arachis hypogaea HOM05D004677 ORTHO05D005746 5.5e-39 164.9 161 56.5
arahy.Tifrunner.gnm1.ann1.5LK61T Arachis hypogaea HOM05D004677 ORTHO05D005746 1.0e-37 160.6 156 57.7
FvH4_6g42850 Fragaria vesca HOM05D004677 ORTHO05D005746 4.9e-35 151.8 147 55.8
FAN02G0422 Fragaria x ananassa HOM05D004677 ORTHO05D005746 4.9e-35 151.8 147 55.8
FAN05G4912 Fragaria x ananassa HOM05D004677 ORTHO05D005746 4.9e-35 151.8 147 55.8
RcHm_v2.0_Chr2g0158791 Rosa chinensis HOM05D004677 ORTHO05D005746 8.3e-35 151.0 162 53.1
FAN14G2731 Fragaria x ananassa HOM05D004677 ORTHO05D005746 1.1e-34 150.6 147 55.8
FAN09G3259 Fragaria x ananassa HOM05D004677 ORTHO05D005746 1.8e-34 149.8 147 54.4
Potri.014G155200 Populus trichocarpa HOM05D004677 ORTHO05D005746 3.1e-34 149.1 149 57.0
Phvul.011G101800 Phaseolus vulgaris HOM05D004677 ORTHO05D005746 7.0e-34 147.9 162 53.1
Sabra14G0117500 Salix brachista HOM05D004677 ORTHO05D005746 7.0e-34 147.9 148 56.8
Gohir.D07G176800 Gossypium hirsutum HOM05D004677 ORTHO05D005746 2.0e-33 146.4 156 54.5
Gorai.001G197600 Gossypium raimondii HOM05D004677 ORTHO05D005746 2.0e-33 146.4 156 54.5
Cpa.g.sc572.2 Carica papaya HOM05D004677 ORTHO05D005746 2.7e-33 146.0 156 53.8
Manes.13G068200 Manihot esculenta HOM05D004677 ORTHO05D005746 2.7e-33 146.0 148 56.8
Cfa014357 Carpinus fangiana HOM05D004677 ORTHO05D005746 3.5e-33 145.6 160 54.4
CsaV3_7G003450 Cucumis sativus L. HOM05D004677 ORTHO05D005746 3.5e-33 145.6 147 56.5
Carub.0004s1386 Capsella rubella HOM05D004677 ORTHO05D005746 7.8e-33 144.4 164 51.8
Atru.chr6.3221 Acer truncatum HOM05D004677 ORTHO05D005746 1.0e-32 144.1 151 55.0
CANSAT64G2258 Cannabis sativa HOM05D004677 ORTHO05D005746 1.0e-32 144.1 151 55.6
CiPaw.03G158200 Carya illinoinensis HOM05D004677 ORTHO05D005746 1.3e-32 143.7 72 90.3
Ciclev10016206m.g Citrus clementina HOM05D004677 ORTHO05D005746 1.3e-32 143.7 163 52.1
TWI18G0105 Tripterygium wilfordii HOM05D004677 ORTHO05D005746 1.3e-32 143.7 148 56.1
Duzib133G0523 Durio zibethinus HOM05D004677 ORTHO05D005746 2.3e-32 142.9 157 52.9
AT2G32520 Arabidopsis thaliana HOM05D004677 ORTHO05D005746 2.9e-32 142.5 164 50.6
MELO3C018827.2 Cucumis melo HOM05D004677 ORTHO05D005746 2.9e-32 142.5 147 55.8
Nitab4.5_0000006g0310 Nicotiana tabacum HOM05D004677 ORTHO05D005746 3.9e-32 142.1 147 52.4
Solyc05g043430.4 Solanum lycopersicum HOM05D004677 ORTHO05D005746 3.9e-32 142.1 147 52.4
Sopen05g026690 Solanum pennellii HOM05D004677 ORTHO05D005746 3.9e-32 142.1 147 52.4
Haze_12810 Corylus avellana HOM05D004677 ORTHO05D005746 5.0e-32 141.7 72 88.9
COL.COLO4_20015 Corchorus olitorius HOM05D004677 ORTHO05D005746 6.6e-32 141.4 152 52.6
Gohir.A07G174750 Gossypium hirsutum HOM05D004677 ORTHO05D005746 6.6e-32 141.4 147 55.1
Medtr4g049830 Medicago truncatula HOM05D004677 ORTHO05D005746 6.6e-32 141.4 172 48.8
QL08p032142 Quercus lobata HOM05D004677 ORTHO05D005746 6.6e-32 141.4 72 88.9
Thhalv10017055m.g Eutrema salsugineum HOM05D004677 ORTHO05D005746 8.6e-32 141.0 164 50.6
Glyma.12G192200 Glycine max HOM05D004677 ORTHO05D005746 1.1e-31 140.6 73 87.7
THA.LOC104800998 Tarenaya hassleriana HOM05D004677 ORTHO05D005746 1.1e-31 140.6 147 55.1
AL4G27910 Arabidopsis lyrata HOM05D004677 ORTHO05D005746 1.5e-31 140.2 164 50.0
PGR142G1137 Punica granatum HOM05D004677 ORTHO05D005746 1.9e-31 139.8 145 54.5
Prupe.3G214600 Prunus persica HOM05D004677 ORTHO05D005746 2.5e-31 139.4 72 86.1
Sed0004392 Sechium edule HOM05D004677 ORTHO05D005746 3.3e-31 139.0 147 53.7
arahy.Tifrunner.gnm1.ann1.4D0QE2 Arachis hypogaea HOM05D004677 ORTHO05D005746 4.3e-31 138.7 188 46.8
BcaC02g07915 Brassica carinata HOM05D004677 ORTHO05D005746 4.3e-31 138.7 157 52.2
C04p62010 Brassica napus HOM05D004677 ORTHO05D005746 4.3e-31 138.7 157 52.2
BolC4t27678H Brassica oleracea HOM05D004677 ORTHO05D005746 4.3e-31 138.7 157 52.9
BraA04t18010Z Brassica rapa HOM05D004677 ORTHO05D005746 4.3e-31 138.7 157 52.9
Ca_19496_v3 Cicer arietinum L. HOM05D004677 ORTHO05D005746 4.3e-31 138.7 148 53.4
Nitab4.5_0004702g0010 Nicotiana tabacum HOM05D004677 ORTHO05D005746 4.3e-31 138.7 147 51.0
Glyma.06G307800 Glycine max HOM05D004677 ORTHO05D005746 9.5e-31 137.5 73 86.3
Thecc.01G176700 Theobroma cacao HOM05D004677 ORTHO05D005746 9.5e-31 137.5 153 52.9
TAR629G2143 Trochodendron aralioides HOM05D004677 ORTHO05D005746 9.5e-31 137.5 146 52.7
Aa31LG5G4780 Aethionema arabicum HOM05D004677 ORTHO05D005746 1.2e-30 137.1 144 54.2
BraA05t20266Z Brassica rapa HOM05D004677 ORTHO05D005746 1.2e-30 137.1 161 49.7
Lalb_Chr01g0005771 Lupinus albus HOM05D004677 ORTHO05D005746 1.2e-30 137.1 73 84.9
Hund06461 Selenicereus undatus HOM05D004677 ORTHO05D005746 1.2e-30 137.1 72 84.7
Phvul.005G116100 Phaseolus vulgaris HOM05D004677 ORTHO05D005746 1.6e-30 136.7 72 86.1
Sc12g0002230 Simmondsia chinensis HOM05D004677 ORTHO05D005746 1.6e-30 136.7 72 83.3
VMungo1080G1602 Vigna mungo HOM05D004677 ORTHO05D005746 1.6e-30 136.7 72 86.1
Oeu027244.1 Olea europaea HOM05D004677 ORTHO05D005746 2.1e-30 136.3 72 84.7
PSO675G6993 Papaver somniferum HOM05D004677 ORTHO05D005746 2.1e-30 136.3 72 83.3
TPR.G4610 Trifolium pratense HOM05D004677 ORTHO05D005746 2.1e-30 136.3 148 52.7
CARHR126350 Cardamine hirsuta HOM05D004677 ORTHO05D005746 2.8e-30 136.0 72 83.3
ClCG02G002040 Citrullus lanatus HOM05D004677 ORTHO05D005746 2.8e-30 136.0 154 51.9
HanXRQChr03g0073261 Helianthus annuus HOM05D004677 ORTHO05D005746 2.8e-30 136.0 72 84.7
Lalb_Chr01g0023241 Lupinus albus HOM05D004677 ORTHO05D005746 2.8e-30 136.0 72 84.7
Psat7g201040 Pisum sativum HOM05D004677 ORTHO05D005746 2.8e-30 136.0 156 51.3
ATR0585G016 Amborella trichopoda HOM05D004677 ORTHO05D005746 3.6e-30 135.6 152 50.7
A05p13260 Brassica napus HOM05D004677 ORTHO05D005746 3.6e-30 135.6 156 49.4
Migut.M00416 Erythranthe guttata HOM05D004677 ORTHO05D005746 3.6e-30 135.6 161 49.1
A04p24990 Brassica napus HOM05D004677 ORTHO05D005746 6.1e-30 134.8 72 84.7
VMungo1127G1216 Vigna mungo HOM05D004677 ORTHO05D005746 8.0e-30 134.4 73 83.6
EL10Ac9g22065 Beta vulgaris HOM05D004677 ORTHO05D005746 1.0e-29 134.0 72 81.9
BcaB06g28600 Brassica carinata HOM05D004677 ORTHO05D005746 1.0e-29 134.0 72 81.9
BcaC02g11313 Brassica carinata HOM05D004677 ORTHO05D005746 1.0e-29 134.0 161 49.1
Nn1g03456 Nelumbo nucifera HOM05D004677 ORTHO05D005746 1.0e-29 134.0 72 80.6
Rhsim06G0164500 Rhododendron simsii HOM05D004677 ORTHO05D005746 1.0e-29 134.0 72 83.3
vmacro12188 Vaccinium macrocarpon HOM05D004677 ORTHO05D005746 1.0e-29 134.0 72 83.3
Oeu036746.3 Olea europaea HOM05D004677 ORTHO05D005746 1.4e-29 133.7 72 81.9
C04p17150 Brassica napus HOM05D004677 ORTHO05D005746 1.8e-29 133.3 153 51.0
BolC4t23265H Brassica oleracea HOM05D004677 ORTHO05D005746 1.8e-29 133.3 153 51.0
Lsat_1_v5_gn_9_106900 Lactuca sativa HOM05D004677 ORTHO05D005746 1.8e-29 133.3 72 80.6
Eucgr.K00785 Eucalyptus grandis HOM05D004677 ORTHO05D005746 2.3e-29 132.9 72 81.9
TWI36G1343 Tripterygium wilfordii HOM05D004677 ORTHO05D005746 2.3e-29 132.9 72 81.9
AUR62012879 Chenopodium quinoa HOM05D004677 ORTHO05D005746 3.1e-29 132.5 72 79.2
AUR62027103 Chenopodium quinoa HOM05D004677 ORTHO05D005746 3.1e-29 132.5 72 79.2
Dinv08753 Davidia involucrata HOM05D004677 ORTHO05D005746 3.1e-29 132.5 72 81.9
Cc05_g03990 Coffea canephora HOM05D004677 ORTHO05D005746 4.0e-29 132.1 73 82.2
Lj3g0003247 Lotus japonicus HOM05D004677 ORTHO05D005746 5.2e-29 131.7 73 79.5
Peaxi162Scf00462g00089 Petunia axillaris HOM05D004677 ORTHO05D005746 5.2e-29 131.7 156 48.1
Sed0023389 Sechium edule HOM05D004677 ORTHO05D005746 5.2e-29 131.7 143 53.1
Hund00385 Selenicereus undatus HOM05D004677 ORTHO05D005746 5.2e-29 131.7 72 80.6
MSTRG.14847 Avicennia marina HOM05D004677 ORTHO05D005746 6.8e-29 131.3 72 81.9
Actinidia09726 Actinidia chinensis HOM05D004677 ORTHO05D005746 8.9e-29 131.0 142 52.8
Aqoxy1G03069 Aquilegia oxysepala HOM05D004677 ORTHO05D005746 2.0e-28 129.8 72 79.2
DCAR_019755 Daucus carota HOM05D004677 ORTHO05D005746 2.0e-28 129.8 72 79.2
Sp4g14870 Schrenkiella parvula HOM05D004677 ORTHO05D005746 2.0e-28 129.8 72 80.6
Lj1A770G43 Lonicera japonica HOM05D004677 ORTHO05D005746 3.4e-28 129.0 72 79.2
MBI10_g41369_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 3.4e-28 129.0 177 44.6
MBI10_g43118_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 3.4e-28 129.0 177 44.6
CSS0008737 Camellia sinensis var. sinensis HOM05D004677 ORTHO05D005746 5.8e-28 128.3 143 49.7
SGA_v2.0_scaffold34G13862 Striga asiatica HOM05D004677 ORTHO05D005746 9.8e-28 127.5 146 47.3
BcaB02g10464 Brassica carinata HOM05D004677 ORTHO05D005746 1.3e-27 127.1 72 79.2
Hma1.2p1_0895F.1_g233790 Hydrangea macrophylla HOM05D004677 ORTHO05D005746 3.7e-27 125.6 72 77.8
SGA_v2.0_scaffold445G51724 Striga asiatica HOM05D004677 ORTHO05D005746 3.7e-27 125.6 72 77.8
Zm00001eb162930 Zea mays HOM05D004677 ORTHO05D005746 4.9e-27 125.2 72 75.0
arahy.Tifrunner.gnm1.ann1.B7RHXH Arachis hypogaea HOM05D004677 ORTHO05D005746 6.4e-27 124.8 183 47.0
Lj3g0012150 Lotus japonicus HOM05D004677 ORTHO05D005746 6.4e-27 124.8 73 74.0
Os01g0531500 Oryza sativa ssp. japonica HOM05D004677 ORTHO05D005746 6.4e-27 124.8 142 47.9
CDE02G1429 Ceratophyllum demersum HOM05D004677 ORTHO05D005746 1.1e-26 124.0 72 73.6
HanXRQChr15g0490311 Helianthus annuus HOM05D004677 ORTHO05D005746 1.9e-26 123.2 72 79.2
MBI10_g35587_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 1.9e-26 123.2 72 73.6
HPP92_020158 Vanilla planifolia HOM05D004677 ORTHO05D005746 1.9e-26 123.2 72 73.6
CDE08G0164 Ceratophyllum demersum HOM05D004677 ORTHO05D005746 3.2e-26 122.5 71 74.6
MBI10_g41368_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 5.4e-26 121.7 72 72.2
ECA240G0706 Erigeron canadensis HOM05D004677 ORTHO05D005746 1.2e-25 120.6 72 77.8
SHI10364 Sapria himalayana HOM05D004677 ORTHO05D005746 1.2e-25 120.6 72 72.2
SGA_v2.0_scaffold186G40184 Striga asiatica HOM05D004677 ORTHO05D005746 3.5e-25 119.0 72 73.6
HPP92_020157 Vanilla planifolia HOM05D004677 ORTHO05D005746 6.0e-25 118.2 72 69.4
SEGI_04984 Sequoiadendron giganteum HOM05D004677 ORTHO05D005746 7.8e-25 117.9 72 70.8
Mapoly0043s0053 Marchantia polymorpha HOM05D004677 ORTHO05D005746 1.5e-23 113.6 153 45.1
Lsat_1_v5_gn_9_106880 Lactuca sativa HOM05D004677 ORTHO05D005746 4.7e-22 108.6 72 65.3
Pp3c16_5740 Physcomitrium patens HOM05D004677 ORTHO05D005746 1.8e-21 106.7 72 66.7
Lj3g0025926 Lotus japonicus HOM05D004677 ORTHO05D005746 6.8e-21 104.8 58 81.0
SGA_v2.0_scaffold228G43250 Striga asiatica HOM05D004677 ORTHO05D005746 8.9e-21 104.4 68 69.1
SMO351G0384 Selaginella moellendorffii HOM05D004677 ORTHO05D005746 2.0e-20 103.2 72 61.1
AagrBONN_evm.TU.Sc2ySwM_117.68 Anthoceros agrestis HOM05D004677 ORTHO05D005746 1.1e-18 97.4 72 58.3
CBR_g23740 Chara braunii HOM05D004677 ORTHO05D005746 1.9e-18 96.7 72 58.3
Nn1g04350 Nelumbo nucifera HOM05D004677 ORTHO05D005746 2.1e-17 93.2 54 75.9
Lj2g0012873 Lotus japonicus HOM05D004677 ORTHO05D005746 1.2e-14 84.0 166 35.5
TAR627G1178 Trochodendron aralioides HOM05D004677 ORTHO05D005746 1.8e-13 80.1 43 81.4
arahy.Tifrunner.gnm1.ann1.4KWR91 Arachis hypogaea HOM05D004677 ORTHO05D082370 3.1e-13 79.3 53 77.4
arahy.Tifrunner.gnm1.ann1.G1NRGV Arachis hypogaea HOM05D004677 ORTHO05D005746 4.0e-13 79.0 144 38.2
Lj3g0001260 Lotus japonicus HOM05D004677 ORTHO05D005746 8.9e-13 77.8 73 47.9
Lj5g0020236 Lotus japonicus HOM05D004677 ORTHO05D005746 8.9e-13 77.8 71 50.7
unitig_0.g733 Utricularia gibba HOM05D004677 ORTHO05D005746 1.2e-12 77.4 38 92.1
MCO13G274 Micromonas commoda HOM05D004677 ORTHO05D005746 1.5e-12 77.0 72 47.2
Cre06.g294000 Chlamydomonas reinhardtii HOM05D004677 ORTHO05D005746 3.4e-12 75.9 72 47.2
arahy.Tifrunner.gnm1.ann1.LRB7BH Arachis hypogaea HOM05D004677 ORTHO05D005746 1.3e-11 73.9 143 37.1
Lj2g0026590 Lotus japonicus HOM05D004677 ORTHO05D005746 3.7e-11 72.4 71 46.5
MD09G1072400 Malus domestica HOM05D004677 ORTHO05D005746 1.1e-10 70.9 37 81.1
arahy.Tifrunner.gnm1.ann1.WARH89 Arachis hypogaea HOM05D004677 ORTHO05D005746 1.4e-10 70.5 31 96.8
AagrBONN_evm.TU.Sc2ySwM_117.4165 Anthoceros agrestis HOM05D004677 ORTHO05D005746 5.4e-10 68.6 75 49.3
DCAR_013148 Daucus carota HOM05D004677 ORTHO05D005746 3.9e-08 62.4 42 69.0
MD17G1099200 Malus domestica HOM05D004677 ORTHO05D005746 3.9e-08 62.4 103 42.7
PRCOL_00005478 Prasinoderma coloniale HOM05D004677 ORTHO05D005746 5.1e-08 62.0 72 40.3


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