Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.65FHJK Arachis hypogaea HOM05D005855 ORTHO05D006406 2.8e-269 931.4 488 100.0
arahy.Tifrunner.gnm1.ann1.VEFL47 Arachis hypogaea HOM05D005855 ORTHO05D006406 5.9e-259 897.1 488 96.1
Lj1g0024601 Lotus japonicus HOM05D005855 ORTHO05D006406 1.1e-175 620.5 487 69.2
Glyma.09G248000 Glycine max HOM05D005855 ORTHO05D006406 2.3e-170 602.8 493 67.7
Glyma.18G244800 Glycine max HOM05D005855 ORTHO05D006406 1.2e-166 590.5 494 66.8
Ca_08015_v3 Cicer arietinum L. HOM05D005855 ORTHO05D006406 7.7e-166 587.8 494 65.4
Phvul.008G051800 Phaseolus vulgaris HOM05D005855 ORTHO05D006406 8.5e-165 584.3 493 67.3
TPR.G31229 Trifolium pratense HOM05D005855 ORTHO05D006406 1.4e-162 577.0 496 65.1
Lalb_Chr03g0038151 Lupinus albus HOM05D005855 ORTHO05D006406 1.7e-160 570.1 486 65.0
VMungo1383G1707 Vigna mungo HOM05D005855 ORTHO05D006406 1.4e-159 567.0 490 63.5
Psat3g103080 Pisum sativum HOM05D005855 ORTHO05D006406 2.8e-152 542.7 500 62.4
Medtr7g080500 Medicago truncatula HOM05D005855 ORTHO05D006406 1.4e-146 523.9 500 62.2
Dinv17130 Davidia involucrata HOM05D005855 ORTHO05D006406 3.8e-133 479.2 491 55.8
QL01p051691 Quercus lobata HOM05D005855 ORTHO05D006406 2.5e-132 476.5 481 54.5
QL01p051722 Quercus lobata HOM05D005855 ORTHO05D006406 2.5e-132 476.5 481 54.5
FAN02G1917 Fragaria x ananassa HOM05D005855 ORTHO05D006406 3.6e-131 472.6 484 56.0
Prupe.6G365000 Prunus persica HOM05D005855 ORTHO05D006406 3.6e-131 472.6 481 58.0
COL.COLO4_22931 Corchorus olitorius HOM05D005855 ORTHO05D006406 4.7e-131 472.2 494 55.1
Lalb_Chr21g0311491 Lupinus albus HOM05D005855 ORTHO05D006406 6.1e-131 471.9 454 59.5
QL01p051710 Quercus lobata HOM05D005855 ORTHO05D006406 5.2e-130 468.8 490 53.5
MD12G1261700 Malus domestica HOM05D005855 ORTHO05D006406 4.4e-129 465.7 483 56.3
FvH4_6g00081 Fragaria vesca HOM05D005855 ORTHO05D006406 2.2e-128 463.4 496 54.8
Haze_04608 Corylus avellana HOM05D005855 ORTHO05D006406 8.3e-128 461.5 483 55.7
FAN14G2818 Fragaria x ananassa HOM05D005855 ORTHO05D006406 1.4e-127 460.7 496 54.6
RcHm_v2.0_Chr3g0447421 Rosa chinensis HOM05D005855 ORTHO05D006406 3.1e-127 459.5 493 54.6
MELO3C008612.2 Cucumis melo HOM05D005855 ORTHO05D006406 4.5e-126 455.7 496 53.0
CsaV3_2G010280 Cucumis sativus L. HOM05D005855 ORTHO05D006406 1.0e-125 454.5 478 53.8
Manes.13G000700 Manihot esculenta HOM05D005855 ORTHO05D006406 9.5e-124 448.0 492 54.7
Atru.chr2.218 Acer truncatum HOM05D005855 ORTHO05D006406 1.4e-119 434.1 505 51.3
Potri.008G077800 Populus trichocarpa HOM05D005855 ORTHO05D006406 1.4e-119 434.1 496 51.2
Actinidia19643 Actinidia chinensis HOM05D005855 ORTHO05D006406 4.1e-119 432.6 467 53.5
CiPaw.08G111900 Carya illinoinensis HOM05D005855 ORTHO05D006406 1.2e-118 431.0 492 52.4
Rhsim04G0133000 Rhododendron simsii HOM05D005855 ORTHO05D006406 2.7e-118 429.9 506 51.4
Sabra08G0057900 Salix brachista HOM05D005855 ORTHO05D006406 2.7e-118 429.9 477 53.0
Hund21931 Selenicereus undatus HOM05D005855 ORTHO05D006406 4.6e-118 429.1 494 51.6
Gohir.A02G107108 Gossypium hirsutum HOM05D005855 ORTHO05D006406 7.8e-118 428.3 498 50.6
CANSAT64G2413 Cannabis sativa HOM05D005855 ORTHO05D006406 1.3e-117 427.6 493 53.3
Gohir.A13G090000 Gossypium hirsutum HOM05D005855 ORTHO05D006406 1.7e-117 427.2 509 51.9
Eucgr.B01457 Eucalyptus grandis HOM05D005855 ORTHO05D006406 3.9e-117 426.0 475 54.1
Ciclev10000302m.g Citrus clementina HOM05D005855 ORTHO05D006406 6.6e-117 425.2 494 50.6
Gorai.002G148000 Gossypium raimondii HOM05D005855 ORTHO05D006406 8.6e-117 424.9 509 51.9
TAR633G1091 Trochodendron aralioides HOM05D005855 ORTHO05D006406 4.3e-116 422.5 498 50.0
vmacro08871 Vaccinium macrocarpon HOM05D005855 ORTHO05D006406 4.3e-116 422.5 512 51.0
Duzib177G0112 Durio zibethinus HOM05D005855 ORTHO05D006406 1.2e-115 421.0 496 54.6
Cc09_g04110 Coffea canephora HOM05D005855 ORTHO05D006406 6.2e-115 418.7 490 49.8
ClCG11G010010 Citrullus lanatus HOM05D005855 ORTHO05D006406 1.5e-113 414.1 490 50.2
Lj8C197T11 Lonicera japonica HOM05D005855 ORTHO05D006406 2.6e-113 413.3 495 51.7
FAN09G4305 Fragaria x ananassa HOM05D005855 ORTHO05D006406 4.4e-113 412.5 521 49.7
Actinidia07922 Actinidia chinensis HOM05D005855 ORTHO05D006406 3.2e-111 406.4 499 48.9
THA.LOC104805689 Tarenaya hassleriana HOM05D005855 ORTHO05D006406 3.2e-111 406.4 475 50.1
Thecc.05G112200 Theobroma cacao HOM05D005855 ORTHO05D006406 9.2e-111 404.8 444 52.7
PGR031G3878 Punica granatum HOM05D005855 ORTHO05D006406 1.2e-110 404.4 479 50.5
Sed0023015 Sechium edule HOM05D005855 ORTHO05D006406 7.8e-110 401.7 497 49.9
AUR62000270 Chenopodium quinoa HOM05D005855 ORTHO05D006406 1.7e-109 400.6 502 48.6
Ah.04g159310 Amaranthus hybridus HOM05D005855 ORTHO05D006406 6.6e-109 398.7 500 49.0
MD00G1017400 Malus domestica HOM05D005855 ORTHO05D006406 1.1e-108 397.9 492 50.4
MSTRG.8191 Avicennia marina HOM05D005855 ORTHO05D006406 3.3e-108 396.4 490 51.2
Gohir.D03G072500 Gossypium hirsutum HOM05D005855 ORTHO05D006406 7.3e-108 395.2 509 48.3
PGSC0003DMG400016248 Solanum tuberosum HOM05D005855 ORTHO05D006406 2.1e-107 393.7 497 48.1
Gohir.D13G093500 Gossypium hirsutum HOM05D005855 ORTHO05D006406 4.7e-107 392.5 510 49.4
Gorai.003G087300 Gossypium raimondii HOM05D005855 ORTHO05D006406 1.4e-106 391.0 509 47.9
Peaxi162Scf00254g00712 Petunia axillaris HOM05D005855 ORTHO05D006406 1.2e-105 387.9 506 47.8
Solyc11g008670.2 Solanum lycopersicum HOM05D005855 ORTHO05D006406 1.2e-105 387.9 498 48.0
Aqoxy2G04154 Aquilegia oxysepala HOM05D005855 ORTHO05D006406 2.6e-105 386.7 494 47.6
Sopen11g004450 Solanum pennellii HOM05D005855 ORTHO05D006406 4.4e-105 386.0 497 47.9
Thhalv10018127m.g Eutrema salsugineum HOM05D005855 ORTHO05D006406 7.5e-105 385.2 473 48.8
CAN.G321.5 Capsicum annuum HOM05D005855 ORTHO05D006406 2.2e-104 383.6 496 49.4
Migut.F01842 Erythranthe guttata HOM05D005855 ORTHO05D006406 3.7e-104 382.9 506 47.8
THA.LOC104822010 Tarenaya hassleriana HOM05D005855 ORTHO05D006406 3.7e-104 382.9 474 47.5
Nitab4.5_0001003g0160 Nicotiana tabacum HOM05D005855 ORTHO05D006406 4.9e-104 382.5 501 47.5
Nitab4.5_0003928g0050 Nicotiana tabacum HOM05D005855 ORTHO05D006406 5.4e-103 379.0 527 46.5
DCAR_031596 Daucus carota HOM05D005855 ORTHO05D006406 7.1e-103 378.6 468 49.4
TAR362G1086 Trochodendron aralioides HOM05D005855 ORTHO05D006406 2.7e-102 376.7 498 46.0
Potri.002G209795 Populus trichocarpa HOM05D005855 ORTHO05D006406 4.6e-102 375.9 429 50.1
TWI18G0231 Tripterygium wilfordii HOM05D005855 ORTHO05D006406 6.0e-102 375.6 489 46.6
Sp5g20320 Schrenkiella parvula HOM05D005855 ORTHO05D006406 7.8e-102 375.2 478 47.9
TWI36G1346 Tripterygium wilfordii HOM05D000941 ORTHO05D006406 7.8e-102 375.2 495 46.5
SGA_v2.0_scaffold122G33208 Striga asiatica HOM05D005855 ORTHO05D006406 5.1e-101 372.5 492 49.8
CARHR057120 Cardamine hirsuta HOM05D005855 ORTHO05D006406 5.6e-100 369.0 469 50.5
AUR62006618 Chenopodium quinoa HOM05D005855 ORTHO05D006406 2.1e-99 367.1 490 45.7
arahy.Tifrunner.gnm1.ann1.X0XBNQ Arachis hypogaea HOM05D005855 ORTHO05D006406 2.6e-97 360.1 194 97.9
Sc16g0010640 Simmondsia chinensis HOM05D005855 ORTHO05D006406 3.4e-97 359.8 429 49.2
Oeu034710.1 Olea europaea HOM05D005855 ORTHO05D006406 5.8e-97 359.0 496 45.8
MBI07_g11487_MAGBIO Magnolia biondii HOM05D005855 ORTHO05D006406 7.6e-97 358.6 502 45.8
AL2G22160 Arabidopsis lyrata HOM05D005855 ORTHO05D006406 4.9e-96 355.9 467 49.3
Aa31LG2G2480 Aethionema arabicum HOM05D005855 ORTHO05D006406 8.4e-96 355.1 481 46.6
AT1G65470 Arabidopsis thaliana HOM05D005855 ORTHO05D006406 8.4e-96 355.1 467 48.4
EL10Ac4g10026 Beta vulgaris HOM05D005855 ORTHO05D006406 3.2e-95 353.2 492 46.7
SGA_v2.0_scaffold340G49313 Striga asiatica HOM05D005855 ORTHO05D006406 4.1e-95 352.8 482 46.1
HanXRQChr16g0511741 Helianthus annuus HOM05D005855 ORTHO05D006406 3.3e-92 343.2 502 46.4
ECA232G0592 Erigeron canadensis HOM05D005855 ORTHO05D006406 1.2e-91 341.3 495 44.2
Lsat_1_v5_gn_0_14480 Lactuca sativa HOM05D005855 ORTHO05D006406 1.4e-90 337.8 479 46.1
arahy.Tifrunner.gnm1.ann1.8C47BX Arachis hypogaea HOM05D005855 ORTHO05D006406 3.8e-88 329.7 496 44.2
PSO017G4019 Papaver somniferum HOM05D005855 ORTHO05D006406 4.9e-88 329.3 460 45.9
arahy.Tifrunner.gnm1.ann1.F2WWIZ Arachis hypogaea HOM05D005855 ORTHO05D006406 5.4e-87 325.9 495 44.2
PSO573G0046 Papaver somniferum HOM05D005855 ORTHO05D006406 1.2e-86 324.7 461 45.6
Carub.0002s1120 Capsella rubella HOM05D005855 ORTHO05D006406 2.1e-86 323.9 486 45.5
Os01g0896300 Oryza sativa ssp. japonica HOM05D005855 ORTHO05D006406 2.1e-86 323.9 496 43.5
C06p39070 Brassica napus HOM05D005855 ORTHO05D006406 1.1e-84 318.2 481 45.9
BolC6t38999H Brassica oleracea HOM05D005855 ORTHO05D006406 2.5e-84 317.0 481 45.9
A07p32840 Brassica napus HOM05D005855 ORTHO05D006406 1.6e-83 314.3 481 45.7
BraA07t30911Z Brassica rapa HOM05D005855 ORTHO05D006406 1.6e-83 314.3 481 45.7
unitig_749.g13497 Utricularia gibba HOM05D005855 ORTHO05D006406 6.2e-83 312.4 485 44.7
Zm00001eb365740 Zea mays HOM05D005855 ORTHO05D006406 1.5e-81 307.8 497 41.6
Zm00001eb144810 Zea mays HOM05D005855 ORTHO05D006406 8.4e-80 302.0 502 41.6
Actinidia31264 Actinidia chinensis HOM05D005855 ORTHO05D006406 6.2e-75 285.8 497 40.2
ATR0743G043 Amborella trichopoda HOM05D005855 ORTHO05D006406 1.4e-74 284.6 510 37.6
HPP92_024393 Vanilla planifolia HOM05D005855 ORTHO05D006406 4.3e-68 263.1 489 42.9
Oeu001220.3 Olea europaea HOM05D005855 ORTHO05D006406 7.4e-68 262.3 395 44.3
GSVIVG01007185001 Vitis vinifera HOM05D005855 ORTHO05D006406 8.4e-64 248.8 238 57.6
Zm00001eb304780 Zea mays HOM05D005855 ORTHO05D006406 4.3e-60 236.5 501 34.7
CDE04G3007 Ceratophyllum demersum HOM05D005855 ORTHO05D006406 9.3e-55 218.8 450 38.9
Os07g0273301 Oryza sativa ssp. japonica HOM05D005855 ORTHO05D006406 1.6e-54 218.0 458 36.9
SEGI_12971 Sequoiadendron giganteum HOM05D005855 ORTHO05D006406 2.5e-47 194.1 525 33.7
Dinv29076 Davidia involucrata HOM05D005855 ORTHO05D006406 1.6e-46 191.4 314 40.1
Cpa.g.sc88.1 Carica papaya HOM05D005855 ORTHO05D006406 5.1e-45 186.4 244 47.5
SMO356G0323 Selaginella moellendorffii HOM05D005855 ORTHO05D006406 4.7e-38 163.3 439 35.3
Pp3c3_24970 Physcomitrium patens HOM05D005855 ORTHO05D006406 2.0e-36 157.9 339 32.2
Mapoly0189s0010 Marchantia polymorpha HOM05D005855 ORTHO05D006406 2.8e-35 154.1 379 38.0
CDE02G2532 Ceratophyllum demersum HOM05D005855 ORTHO05D006406 2.4e-34 151.0 259 40.9
AagrBONN_evm.TU.Sc2ySwM_344.4907 Anthoceros agrestis HOM05D005855 ORTHO05D006406 4.8e-27 126.7 479 28.8
CBR_g39948 Chara braunii HOM05D005855 ORTHO05D006406 1.2e-25 122.1 229 38.9
Zm00001eb310680 Zea mays HOM05D000012 ORTHO05D006406 1.7e-24 118.2 160 44.4
Zm00001eb381860 Zea mays HOM05D000012 ORTHO05D006406 7.2e-15 86.3 89 50.6
Zm00001eb367440 Zea mays HOM05D005855 ORTHO05D006406 6.3e-11 73.2 129 42.6
Cre12.g550152 Chlamydomonas reinhardtii HOM05D005855 ORTHO05D006406 1.4e-10 72.0 116 47.4
Nn8g40536 Nelumbo nucifera HOM05D005855 ORTHO05D006406 1.3e-08 65.5 73 46.6
RcHm_v2.0_Chr5g0011851 Rosa chinensis HOM05D005855 ORTHO05D006406 1.7e-08 65.1 47 61.7
Lju114A5T28 Lonicera japonica HOM05D005855 ORTHO05D006406 9.5e-07 59.3 135 37.0


User provided reference genes

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