Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.601MBY Arachis hypogaea HOM05D000566 ORTHO05D083847 6.2e-52 207.2 108 100.0
arahy.Tifrunner.gnm1.ann1.YI8MDQ Arachis hypogaea HOM05D000566 ORTHO05D004798 8.8e-14 80.5 66 72.7
arahy.Tifrunner.gnm1.ann1.561HRF Arachis hypogaea HOM05D000566 ORTHO05D004798 3.3e-13 78.6 66 71.2
Lj3g0025101 Lotus japonicus HOM05D000566 ORTHO05D004798 8.5e-09 63.9 66 56.1
Glyma.13G353200 Glycine max HOM05D000566 ORTHO05D004798 1.1e-08 63.5 54 59.3
SGA_v2.0_scaffold265G46055 Striga asiatica HOM05D000566 ORTHO05D004798 1.1e-08 63.5 67 53.7
MD09G1199900 Malus domestica HOM05D000566 ORTHO05D004798 1.9e-08 62.8 66 54.5
vmacro18840 Vaccinium macrocarpon HOM05D000566 ORTHO05D004798 1.9e-08 62.8 78 52.6
Thecc.06G102300 Theobroma cacao HOM05D000566 ORTHO05D004798 2.5e-08 62.4 66 54.5
Cc04_g02420 Coffea canephora HOM05D000566 ORTHO05D004798 5.5e-08 61.2 67 52.2
Phvul.005G164900 Phaseolus vulgaris HOM05D000566 ORTHO05D004798 5.5e-08 61.2 54 55.6
VMungo1080G1237 Vigna mungo HOM05D000566 ORTHO05D004798 7.2e-08 60.8 54 55.6
Actinidia32114 Actinidia chinensis HOM05D000566 ORTHO05D004798 9.4e-08 60.5 66 56.1
QL02p056177 Quercus lobata HOM05D000566 ORTHO05D004798 1.2e-07 60.1 67 53.7
QL05p018774 Quercus lobata HOM05D000566 ORTHO05D004798 1.2e-07 60.1 67 53.7
FAN09G1216 Fragaria x ananassa HOM05D000566 ORTHO05D004798 1.6e-07 59.7 66 54.5
Sed0017098 Sechium edule HOM05D000566 ORTHO05D004798 1.6e-07 59.7 66 54.5
Duzib235G0481 Durio zibethinus HOM05D000566 ORTHO05D004798 2.1e-07 59.3 66 54.5
FAN05G4273 Fragaria x ananassa HOM05D000566 ORTHO05D004798 2.1e-07 59.3 66 54.5
Glyma.15G021100 Glycine max HOM05D000566 ORTHO05D004798 2.1e-07 59.3 54 55.6
Prupe.3G056400 Prunus persica HOM05D000566 ORTHO05D004798 2.1e-07 59.3 66 53.0
Oeu026720.1 Olea europaea HOM05D000566 ORTHO05D004798 2.7e-07 58.9 67 50.7
Rhsim08G0228800 Rhododendron simsii HOM05D000566 ORTHO05D004798 2.7e-07 58.9 66 51.5
Duzib192G0109 Durio zibethinus HOM05D000566 ORTHO05D004798 3.6e-07 58.5 89 46.1
CSS0004558 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D004798 4.7e-07 58.2 66 51.5
FvH4_6g32630 Fragaria vesca HOM05D000566 ORTHO05D004798 4.7e-07 58.2 66 54.5
Hma1.2p1_1621F.1_g294040 Hydrangea macrophylla HOM05D000566 ORTHO05D004798 4.7e-07 58.2 66 51.5
AUR62022243 Chenopodium quinoa HOM05D000566 ORTHO05D004798 6.1e-07 57.8 55 54.5
ClCG09G000280 Citrullus lanatus HOM05D000566 ORTHO05D004798 6.1e-07 57.8 67 52.2
FAN02G0749 Fragaria x ananassa HOM05D000566 ORTHO05D004798 6.1e-07 57.8 66 53.0
Gorai.009G138100 Gossypium raimondii HOM05D000566 ORTHO05D004798 8.0e-07 57.4 66 48.5
Medtr8g014900 Medicago truncatula HOM05D000566 ORTHO05D004798 8.0e-07 57.4 66 53.0
Psat5g295160 Pisum sativum HOM05D000566 ORTHO05D004798 8.0e-07 57.4 47 59.6
TPR.G6520 Trifolium pratense HOM05D000566 ORTHO05D004798 8.0e-07 57.4 66 50.0
CiPaw.01G229800 Carya illinoinensis HOM05D000566 ORTHO05D004798 1.0e-06 57.0 66 53.0
Potri.003G047200 Populus trichocarpa HOM05D000566 ORTHO05D004798 1.0e-06 57.0 77 49.4
Cfa003630 Carpinus fangiana HOM05D000566 ORTHO05D004798 1.4e-06 56.6 66 54.5
Ciclev10025160m.g Citrus clementina HOM05D000566 ORTHO05D004798 1.4e-06 56.6 47 61.7
MELO3C024431.2 Cucumis melo HOM05D000566 ORTHO05D004798 1.4e-06 56.6 55 54.5
Lj9A515T34 Lonicera japonica HOM05D000566 ORTHO05D004798 1.4e-06 56.6 66 50.0
Potri.001G191300 Populus trichocarpa HOM05D000566 ORTHO05D004798 1.4e-06 56.6 66 50.0
RcHm_v2.0_Chr2g0141111 Rosa chinensis HOM05D000566 ORTHO05D004798 1.4e-06 56.6 66 48.5
VMungo0331G1583 Vigna mungo HOM05D000566 ORTHO05D004798 1.4e-06 56.6 66 51.5
COL.COLO4_30537 Corchorus olitorius HOM05D000428 ORTHO05D004798 1.8e-06 56.2 66 50.0
Eucgr.F03088 Eucalyptus grandis HOM05D000566 ORTHO05D004798 1.8e-06 56.2 66 51.5
FAN05G2580 Fragaria x ananassa HOM05D000566 ORTHO05D004798 1.8e-06 56.2 66 53.0
FAN14G0380 Fragaria x ananassa HOM05D000566 ORTHO05D004798 1.8e-06 56.2 66 53.0
Lalb_Chr04g0263011 Lupinus albus HOM05D000566 ORTHO05D004798 1.8e-06 56.2 106 39.6
Lalb_Chr22g0351621 Lupinus albus HOM05D000566 ORTHO05D004798 1.8e-06 56.2 76 44.7
Peaxi162Scf00038g01130 Petunia axillaris HOM05D000566 ORTHO05D004798 1.8e-06 56.2 67 47.8
Actinidia21725 Actinidia chinensis HOM05D000566 ORTHO05D004798 2.3e-06 55.8 66 51.5
AUR62031956 Chenopodium quinoa HOM05D000566 ORTHO05D004798 2.3e-06 55.8 55 52.7
Ca_01174_v3 Cicer arietinum L. HOM05D000566 ORTHO05D004798 2.3e-06 55.8 66 47.0
Gohir.D05G134500 Gossypium hirsutum HOM05D000566 ORTHO05D004798 2.3e-06 55.8 66 47.0
Nitab4.5_0003489g0020 Nicotiana tabacum HOM05D000566 ORTHO05D004798 2.3e-06 55.8 67 46.3
Phvul.010G143700 Phaseolus vulgaris HOM05D000566 ORTHO05D004798 3.0e-06 55.5 66 50.0
TPR.G15135 Trifolium pratense HOM05D000566 ORTHO05D004798 3.0e-06 55.5 66 47.0
Glyma.08G199600 Glycine max HOM05D000566 ORTHO05D004798 4.0e-06 55.1 66 50.0
CANSAT56G2153 Cannabis sativa HOM05D000566 ORTHO05D004798 5.2e-06 54.7 66 48.5
Dinv37962 Davidia involucrata HOM05D000566 ORTHO05D004798 5.2e-06 54.7 66 50.0
Gohir.A05G132600 Gossypium hirsutum HOM05D000566 ORTHO05D004798 5.2e-06 54.7 66 45.5
TWI18G1121 Tripterygium wilfordii HOM05D000566 ORTHO05D004798 5.2e-06 54.7 66 47.0
CsaV3_7G035220 Cucumis sativus L. HOM05D000566 ORTHO05D004798 6.7e-06 54.3 55 54.5
Gohir.A02G116601 Gossypium hirsutum HOM05D000566 ORTHO05D004798 6.7e-06 54.3 66 48.5
Nitab4.5_0000300g0150 Nicotiana tabacum HOM05D000566 ORTHO05D004798 6.7e-06 54.3 67 49.3
Cfa003628 Carpinus fangiana HOM05D000566 ORTHO05D004798 8.8e-06 53.9 66 53.0
Haze_15871 Corylus avellana HOM05D000566 ORTHO05D004798 8.8e-06 53.9 66 51.5
Haze_15875 Corylus avellana HOM05D000566 ORTHO05D004798 8.8e-06 53.9 66 51.5
Medtr2g100630 Medicago truncatula HOM05D000566 ORTHO05D004798 8.8e-06 53.9 66 48.5


User provided reference genes

Program Settings