Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 1.4e-195 686.0 342 100.0
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 6.1e-194 680.6 342 99.4
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 1.4e-150 536.6 344 79.4
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 8.6e-148 527.3 344 78.2
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 3.6e-146 521.9 344 77.6
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 1.5e-144 516.5 342 75.7
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 3.2e-142 508.8 288 83.7
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 1.2e-136 490.3 343 72.9
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 1.7e-132 476.5 332 72.0
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 3.9e-132 475.3 341 70.4
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 5.1e-132 474.9 323 73.4
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 7.3e-131 471.1 342 68.4
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 5.2e-129 464.9 342 69.6
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 6.9e-129 464.5 296 76.0
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 9.0e-129 464.2 336 69.6
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 1.2e-128 463.8 327 72.2
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.5e-128 463.4 335 69.0
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 1.5e-128 463.4 281 79.0
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 2.0e-128 463.0 340 67.9
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 2.0e-128 463.0 336 69.3
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 2.6e-128 462.6 337 68.2
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 2.6e-128 462.6 337 67.4
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 3.4e-128 462.2 340 70.3
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 3.4e-128 462.2 345 68.4
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 3.4e-128 462.2 339 69.3
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 7.6e-128 461.1 336 68.8
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 1.3e-127 460.3 335 68.4
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 1.7e-127 459.9 323 70.3
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 2.2e-127 459.5 339 67.8
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 3.8e-127 458.8 340 68.2
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 3.8e-127 458.8 314 72.3
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 1.4e-126 456.8 398 61.8
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 5.4e-126 454.9 345 67.5
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 7.1e-126 454.5 317 71.9
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 1.6e-125 453.4 317 71.9
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 1.6e-125 453.4 300 73.7
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 2.1e-125 453.0 328 68.9
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 8.7e-124 447.6 329 68.4
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 1.1e-123 447.2 297 73.1
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 3.3e-123 445.7 335 72.2
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 4.3e-123 445.3 348 66.7
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 7.3e-123 444.5 314 71.7
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 1.6e-122 443.4 338 65.4
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 2.1e-122 443.0 349 66.8
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 2.8e-122 442.6 315 70.5
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 4.8e-122 441.8 344 65.4
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 1.1e-121 440.7 337 64.1
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 1.4e-121 440.3 348 65.8
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 2.4e-121 439.5 349 65.3
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 2.4e-121 439.5 322 69.9
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 3.1e-121 439.1 337 65.6
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 3.1e-121 439.1 300 70.7
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 3.1e-121 439.1 319 67.4
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 4.0e-121 438.7 338 65.7
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 5.3e-121 438.3 312 70.5
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 5.3e-121 438.3 338 64.2
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 6.9e-121 438.0 338 65.7
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 9.0e-121 437.6 337 66.2
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 1.5e-120 436.8 325 66.5
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 2.0e-120 436.4 286 73.1
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 2.6e-120 436.0 280 73.6
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 5.8e-120 434.9 338 65.4
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 2.2e-119 433.0 323 67.5
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 2.2e-119 433.0 279 73.1
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 2.9e-119 432.6 338 63.6
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 2.9e-119 432.6 298 73.2
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 6.4e-119 431.4 279 71.7
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 6.4e-119 431.4 281 73.0
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 8.4e-119 431.0 342 63.7
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 1.4e-118 430.3 283 72.4
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 1.9e-118 429.9 335 64.5
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 3.2e-118 429.1 278 73.0
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 4.2e-118 428.7 342 64.6
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 4.2e-118 428.7 262 77.5
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 9.3e-118 427.6 263 79.1
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 9.3e-118 427.6 262 76.7
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 1.6e-117 426.8 312 67.0
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 3.5e-117 425.6 338 63.9
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 4.6e-117 425.2 262 76.7
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 6.0e-117 424.9 309 68.9
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 1.3e-116 423.7 281 71.9
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 5.6e-115 418.3 276 74.3
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 3.1e-113 412.5 283 70.7
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 1.3e-111 407.1 295 69.5
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 4.9e-111 405.2 280 71.4
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 5.1e-108 395.2 456 48.5
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 3.3e-107 392.5 259 70.3
Nitab4.5_0004719g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 3.7e-106 389.0 230 80.4
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 8.2e-106 387.9 315 61.0
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 3.1e-105 386.0 282 66.0
PSO782G1223 Papaver somniferum HOM05D004993 ORTHO05D008532 6.5e-103 378.3 338 59.8
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 3.7e-98 362.5 338 56.5
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 4.3e-91 339.0 321 58.9
Ah.02g127080 Amaranthus hybridus HOM05D004993 ORTHO05D008532 1.1e-89 334.3 348 54.0
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 1.8e-89 333.6 268 56.7
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 4.1e-89 332.4 259 56.8
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 1.1e-86 324.3 323 54.8
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 2.1e-85 320.1 261 56.3
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 3.0e-84 316.2 272 58.1
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 2.2e-82 310.1 237 59.5
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 3.1e-81 306.2 225 70.7
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 4.7e-77 292.4 292 53.1
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 8.2e-74 281.6 157 80.9
Actinidia38387 Actinidia chinensis HOM05D004993 ORTHO05D008532 4.1e-65 252.7 153 77.1
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 4.8e-58 229.2 155 69.7
Ca_20419_v3 Cicer arietinum L. HOM05D004993 ORTHO05D008532 1.1e-57 228.0 135 80.7
CBR_g46806 Chara braunii HOM05D004993 ORTHO05D008532 1.7e-55 220.7 271 42.4
Cpa.g.c35723 Carica papaya HOM05D004993 ORTHO05D008532 2.3e-55 220.3 136 74.3
ECA248G2500 Erigeron canadensis HOM05D004993 ORTHO05D008532 7.8e-48 195.3 283 41.0
SEGI_28994 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 8.0e-45 185.3 134 60.4
Actinidia13671 Actinidia chinensis HOM05D004993 ORTHO05D008532 7.8e-40 168.7 97 81.4
Cre10.g442950 Chlamydomonas reinhardtii HOM05D004993 ORTHO05D008532 5.8e-35 152.5 310 31.3
Pp3c27_8380 Physcomitrium patens HOM05D004993 ORTHO05D008532 5.1e-31 139.4 258 33.7
MCO14G082 Micromonas commoda HOM05D004993 ORTHO05D008532 4.4e-27 126.3 283 33.9
CARHR029040 Cardamine hirsuta HOM05D004993 ORTHO05D008532 1.0e-15 88.6 99 48.5
SEGI_13194 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 1.2e-13 81.6 106 43.4
Migut.G01033 Erythranthe guttata HOM05D004993 ORTHO05D008532 7.1e-09 65.9 49 55.1


User provided reference genes

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