Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.5ZDL5Q Arachis hypogaea HOM05D006652 ORTHO05D008645 3.5e-214 748.0 381 100.0
arahy.Tifrunner.gnm1.ann1.KP1SVS Arachis hypogaea HOM05D006652 ORTHO05D008645 3.2e-212 741.5 381 99.0
Glyma.12G122700 Glycine max HOM05D006652 ORTHO05D008645 2.2e-160 569.3 384 75.0
Lalb_Chr19g0134921 Lupinus albus HOM05D006652 ORTHO05D008645 2.2e-160 569.3 382 76.4
Phvul.011G134400 Phaseolus vulgaris HOM05D006652 ORTHO05D008645 6.4e-160 567.8 384 73.7
Lj3g0009013 Lotus japonicus HOM05D006652 ORTHO05D008645 1.1e-159 567.0 386 75.1
Ca_18890_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 7.1e-159 564.3 382 75.4
Glyma.06G283400 Glycine max HOM05D006652 ORTHO05D008645 3.6e-155 552.0 382 74.1
Medtr4g079750 Medicago truncatula HOM05D006652 ORTHO05D008645 7.6e-153 544.3 322 81.7
VMungo1127G0176 Vigna mungo HOM05D006652 ORTHO05D008645 2.9e-152 542.3 384 71.1
Glyma.06G283600 Glycine max HOM05D006652 ORTHO05D008645 4.9e-152 541.6 385 70.9
QL08p041412 Quercus lobata HOM05D006652 ORTHO05D008645 2.1e-147 526.2 320 79.7
CSS0047332 Camellia sinensis var. sinensis HOM05D006652 ORTHO05D008645 4.8e-147 525.0 320 78.4
vmacro09218 Vaccinium macrocarpon HOM05D006652 ORTHO05D008645 4.8e-147 525.0 320 78.8
CiPaw.03G187000 Carya illinoinensis HOM05D006652 ORTHO05D008645 1.8e-146 523.1 380 70.3
Nitab4.5_0000822g0100 Nicotiana tabacum HOM05D006652 ORTHO05D008645 4.0e-146 521.9 322 77.6
Peaxi162Scf00241g00812 Petunia axillaris HOM05D006652 ORTHO05D008645 4.0e-146 521.9 328 76.2
Dinv08786 Davidia involucrata HOM05D006652 ORTHO05D008645 5.8e-145 518.1 328 75.9
CAN.G782.5 Capsicum annuum HOM05D006652 ORTHO05D008645 4.9e-144 515.0 333 74.5
Hma1.2p1_0166F.1_g073540 Hydrangea macrophylla HOM05D006652 ORTHO05D008645 4.9e-144 515.0 332 75.0
TAR629G0548 Trochodendron aralioides HOM05D006652 ORTHO05D008645 1.1e-143 513.8 326 75.8
GSVIVG01020686001 Vitis vinifera HOM05D006652 ORTHO05D008645 1.1e-143 513.8 383 69.5
Solyc10g008020.3 Solanum lycopersicum HOM05D006652 ORTHO05D008645 1.9e-143 513.1 324 76.5
Aqoxy4G00418 Aquilegia oxysepala HOM05D006652 ORTHO05D008645 9.3e-143 510.8 341 73.6
Sopen10g003890 Solanum pennellii HOM05D006652 ORTHO05D008645 9.3e-143 510.8 324 76.2
Nn1g04382 Nelumbo nucifera HOM05D006652 ORTHO05D008645 3.0e-141 505.8 338 71.9
Sabra19G0100100 Salix brachista HOM05D006652 ORTHO05D008645 3.0e-141 505.8 328 74.4
Gohir.A10G153800 Gossypium hirsutum HOM05D006652 ORTHO05D008645 5.1e-141 505.0 354 72.3
Potri.019G089700 Populus trichocarpa HOM05D006652 ORTHO05D008645 5.1e-141 505.0 328 74.1
AUR62038922 Chenopodium quinoa HOM05D006652 ORTHO05D008645 6.7e-141 504.6 368 68.5
Hund07829 Selenicereus undatus HOM05D006652 ORTHO05D008645 6.7e-141 504.6 341 72.4
Sabra19G0103300 Salix brachista HOM05D006652 ORTHO05D008645 1.1e-140 503.8 328 74.1
Gohir.D10G112300 Gossypium hirsutum HOM05D006652 ORTHO05D008645 1.9e-140 503.1 354 72.0
Migut.H02157 Erythranthe guttata HOM05D006652 ORTHO05D008645 5.6e-140 501.5 320 75.3
HanXRQChr17g0558041 Helianthus annuus HOM05D006652 ORTHO05D008645 5.6e-140 501.5 349 71.3
Lsat_1_v5_gn_8_140221 Lactuca sativa HOM05D006652 ORTHO05D008645 1.3e-139 500.4 320 75.3
Gorai.011G124200 Gossypium raimondii HOM05D006652 ORTHO05D008645 1.6e-139 500.0 368 69.3
Eucgr.K01102 Eucalyptus grandis HOM05D006652 ORTHO05D008645 2.1e-139 499.6 343 69.4
Lj8C103T10 Lonicera japonica HOM05D006652 ORTHO05D008645 2.8e-139 499.2 330 75.2
Nitab4.5_0008146g0020 Nicotiana tabacum HOM05D006652 ORTHO05D008645 2.8e-139 499.2 322 74.8
EL10Ac9g20915 Beta vulgaris HOM05D006652 ORTHO05D008645 1.4e-138 496.9 371 66.8
Os10g0181600 Oryza sativa ssp. japonica HOM05D006652 ORTHO05D008645 2.4e-138 496.1 332 71.7
ECA234G1589 Erigeron canadensis HOM05D006652 ORTHO05D008645 5.3e-138 495.0 320 74.7
Thecc.01G148700 Theobroma cacao HOM05D006652 ORTHO05D008645 4.5e-137 491.9 382 67.3
MSTRG.14312 Avicennia marina HOM05D006652 ORTHO05D008645 5.8e-137 491.5 375 67.2
COL.COLO4_33547 Corchorus olitorius HOM05D006652 ORTHO05D008645 7.6e-137 491.1 379 66.0
ATR0661G163 Amborella trichopoda HOM05D006652 ORTHO05D008645 2.2e-136 489.6 343 67.9
Ciclev10015734m.g Citrus clementina HOM05D006652 ORTHO05D008645 3.8e-136 488.8 351 70.4
SalBow7G3656 Salvia bowleyana HOM05D006652 ORTHO05D008645 3.8e-136 488.8 335 71.0
PGR142G2816 Punica granatum HOM05D006652 ORTHO05D008645 8.4e-136 487.6 336 69.6
unitig_21.g20276 Utricularia gibba HOM05D006652 ORTHO05D008645 3.2e-135 485.7 320 73.8
Zm00001eb223890 Zea mays HOM05D006652 ORTHO05D008645 1.6e-134 483.4 343 69.7
Atru.chr6.2810_Atru.chr6.2811 Acer truncatum HOM05D006652 ORTHO05D008645 2.7e-134 482.6 371 66.0
CsaV3_6G018460 Cucumis sativus L. HOM05D006652 ORTHO05D008645 2.7e-134 482.6 328 70.1
Duzib187G0644 Durio zibethinus HOM05D006652 ORTHO05D008645 2.1e-131 473.0 327 70.3
PGSC0003DMG400010544 Solanum tuberosum HOM05D006652 ORTHO05D008645 1.8e-130 469.9 387 62.8
Psat7g166280 Pisum sativum HOM05D006652 ORTHO05D008645 5.8e-129 464.9 307 76.5
SGA_v2.0_scaffold109G31132 Striga asiatica HOM05D006652 ORTHO05D008645 6.5e-128 461.5 452 56.6
Actinidia39342 Actinidia chinensis HOM05D006652 ORTHO05D008645 1.2e-126 457.2 277 78.3
MBI11_g14404_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 3.5e-126 455.7 355 67.3
TWI59G0297 Tripterygium wilfordii HOM05D006652 ORTHO05D008645 5.9e-121 438.3 325 68.6
Rhsim04G0074100 Rhododendron simsii HOM05D006652 ORTHO05D008645 4.6e-118 428.7 328 65.9
Manes.13G137800 Manihot esculenta HOM05D006652 ORTHO05D008645 1.4e-117 427.2 266 75.2
Cc05_g08190 Coffea canephora HOM05D006652 ORTHO05D008645 2.5e-116 422.9 301 70.1
Glyma.06G283500 Glycine max HOM05D006652 ORTHO05D008645 2.5e-116 422.9 292 72.9
Cc05_g08160 Coffea canephora HOM05D006652 ORTHO05D008645 2.2e-115 419.9 278 73.7
AUR62038997 Chenopodium quinoa HOM05D006652 ORTHO05D008645 2.8e-115 419.5 383 59.3
Sed0018596 Sechium edule HOM05D006652 ORTHO05D008645 2.9e-112 409.5 277 69.7
Pp3c3_7460 Physcomitrium patens HOM05D006652 ORTHO05D008645 3.3e-108 396.0 362 55.5
SMO334G0043 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 2.4e-106 389.8 325 59.1
CDE11G0921 Ceratophyllum demersum HOM05D006652 ORTHO05D008645 3.8e-104 382.5 265 67.9
Mapoly0061s0036 Marchantia polymorpha HOM05D006652 ORTHO05D008645 5.3e-98 362.1 323 54.5
DCAR_013062 Daucus carota HOM05D006652 ORTHO05D008645 1.1e-95 354.4 323 60.1
MBI11_g19676_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 5.3e-90 335.5 277 61.4
ClCG02G017930 Citrullus lanatus HOM05D006652 ORTHO05D008645 1.2e-89 334.3 349 53.6
TPR.G21861 Trifolium pratense HOM05D006652 ORTHO05D008645 7.5e-84 315.1 245 69.4
Ca_18889_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 9.1e-82 308.1 224 71.4
CBR_g20425 Chara braunii HOM05D006652 ORTHO05D008645 2.0e-81 307.0 338 47.0
Cc00_g35820 Coffea canephora HOM05D006652 ORTHO05D008645 1.3e-75 287.7 236 62.7
MCO11G400 Micromonas commoda HOM05D006652 ORTHO05D008645 4.9e-75 285.8 319 46.4
Zm00001eb307930 Zea mays HOM05D006652 ORTHO05D008645 1.8e-74 283.9 204 63.7
AagrBONN_evm.TU.Sc2ySwM_228.444 Anthoceros agrestis HOM05D006652 ORTHO05D008645 2.9e-72 276.6 225 61.8
MELO3C019759.2 Cucumis melo HOM05D006652 ORTHO05D008645 1.1e-71 274.6 184 72.3
PRCOL_00002204 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 3.3e-71 273.1 326 47.2
PGR142G0648 Punica granatum HOM05D006652 ORTHO05D008645 2.8e-70 270.0 211 62.1
Zm00001eb202810 Zea mays HOM05D006652 ORTHO05D008645 3.3e-63 246.5 262 51.1
CBR_g20426 Chara braunii HOM05D006652 ORTHO05D008645 6.2e-62 242.3 395 37.5
arahy.Tifrunner.gnm1.ann1.MYHL2J Arachis hypogaea HOM05D006652 ORTHO05D008645 2.3e-61 240.4 143 85.3
Zm00001eb155780 Zea mays HOM05D006652 ORTHO05D008645 3.1e-61 240.0 249 52.2
Zm00001eb127120 Zea mays HOM05D006652 ORTHO05D008645 8.9e-61 238.4 252 50.4
Mapoly0285s0004 Marchantia polymorpha HOM05D006652 ORTHO05D008645 7.5e-60 235.3 220 55.0
Cre03.g200350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 2.9e-59 233.4 321 40.8
Ca_18891_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 2.4e-50 203.8 158 70.9
SMO118G0546 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 1.6e-49 201.1 303 37.3
Pp3c17_23540 Physcomitrium patens HOM05D006652 ORTHO05D008645 1.9e-47 194.1 335 33.7
SEGI_35274 Sequoiadendron giganteum HOM05D006652 ORTHO05D008645 5.6e-47 192.6 305 36.1
Cre06.g259401 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 2.8e-46 190.3 361 34.9
Haze_13351 Corylus avellana HOM05D006652 ORTHO05D008645 1.4e-45 188.0 120 74.2
Mapoly0050s0024 Marchantia polymorpha HOM05D006652 ORTHO05D008645 2.0e-44 184.1 313 35.5
CBR_g34298 Chara braunii HOM05D006652 ORTHO05D008645 5.8e-44 182.6 321 35.5
Haze_13350 Corylus avellana HOM05D006652 ORTHO05D008645 1.3e-38 164.9 92 85.9
MCO08G076 Micromonas commoda HOM05D006652 ORTHO05D008645 2.8e-38 163.7 318 32.7
Zm00001eb272210 Zea mays HOM05D006652 ORTHO05D008645 4.8e-38 162.9 203 46.3
PRCOL_00006996 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 4.0e-37 159.8 311 34.4
TPR.G21859 Trifolium pratense HOM05D006652 ORTHO05D008645 9.9e-36 155.2 139 57.6
ECA234G0151 Erigeron canadensis HOM05D006652 ORTHO05D008645 6.4e-35 152.5 101 70.3
AUR62024835 Chenopodium quinoa HOM05D006652 ORTHO05D008645 7.9e-33 145.6 123 59.3
TPR.G21704 Trifolium pratense HOM05D006652 ORTHO05D008645 4.3e-31 139.8 125 57.6
AagrBONN_evm.TU.Sc2ySwM_117.2543 Anthoceros agrestis HOM05D006652 ORTHO05D008645 4.9e-27 126.3 182 40.7
Glyma.12G122501 Glycine max HOM05D006652 ORTHO05D008645 1.9e-23 114.4 87 67.8
PRCOL_00001996 Prasinoderma coloniale HOM05D006652 ORTHO05D028803 2.7e-17 94.0 249 28.9
Cc05_g08180 Coffea canephora HOM05D006652 ORTHO05D008645 1.8e-16 91.3 54 77.8
Cc05_g08150 Coffea canephora HOM05D006652 ORTHO05D008645 8.7e-16 89.0 54 75.9
Cre06.g286350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D028803 1.7e-11 74.7 258 25.6
Haze_13352 Corylus avellana HOM05D006652 ORTHO05D008645 8.4e-11 72.4 43 76.7
MCO15G420 Micromonas commoda HOM05D006652 ORTHO05D028803 1.4e-10 71.6 233 25.3
Zm00001eb048070 Zea mays HOM05D001272 ORTHO05D001099 7.2e-10 69.3 57 61.4
Ah.07g202300 Amaranthus hybridus HOM05D006652 ORTHO05D008645 9.3e-10 68.9 101 41.6
PRCOL_00002129 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 2.1e-09 67.8 236 26.3
Cre06.g286300 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D028803 3.5e-09 67.0 243 25.9
Ah.08g222620 Amaranthus hybridus HOM05D006652 ORTHO05D008645 4.6e-09 66.6 56 57.1
BcaB03g11936 Brassica carinata HOM05D005748 ORTHO05D007123 5.7e-07 59.7 138 30.4


User provided reference genes

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