Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.5XIH37 Arachis hypogaea HOM05D005374 ORTHO05D006534 3.2e-89 331.6 157 100.0
arahy.Tifrunner.gnm1.ann1.W15AHF Arachis hypogaea HOM05D005374 ORTHO05D006534 5.3e-52 208.0 122 84.4
arahy.Tifrunner.gnm1.ann1.B0SCIB Arachis hypogaea HOM05D005374 ORTHO05D006534 2.0e-51 206.1 119 85.7
arahy.Tifrunner.gnm1.ann1.BM6K92 Arachis hypogaea HOM05D005374 ORTHO05D006534 2.0e-51 206.1 119 85.7
arahy.Tifrunner.gnm1.ann1.Y4UVSP Arachis hypogaea HOM05D005374 ORTHO05D006534 2.0e-51 206.1 119 85.7
Glyma.01G154100 Glycine max HOM05D005374 ORTHO05D006534 7.2e-49 197.6 119 80.7
Phvul.002G121600 Phaseolus vulgaris HOM05D005374 ORTHO05D006534 7.9e-48 194.1 119 79.0
Lj2g0008244 Lotus japonicus HOM05D005374 ORTHO05D006534 1.4e-47 193.4 119 79.0
Cfa012294 Carpinus fangiana HOM05D005374 ORTHO05D006534 2.3e-47 192.6 119 79.0
VMungo1215G0733 Vigna mungo HOM05D005374 ORTHO05D006534 3.0e-47 192.2 119 78.2
Lalb_Chr16g0380381 Lupinus albus HOM05D005374 ORTHO05D006534 3.9e-47 191.8 120 78.3
TWI18G0367 Tripterygium wilfordii HOM05D005374 ORTHO05D006534 2.6e-46 189.1 120 75.0
Ca_25046_v3 Cicer arietinum L. HOM05D005374 ORTHO05D006534 3.3e-46 188.7 119 75.6
COL.COLO4_16753 Corchorus olitorius HOM05D005374 ORTHO05D006534 3.3e-46 188.7 118 77.1
Haze_08435 Corylus avellana HOM05D005374 ORTHO05D006534 3.3e-46 188.7 119 78.2
Thecc.03G319500 Theobroma cacao HOM05D005374 ORTHO05D006534 4.4e-46 188.3 119 76.5
Dinv37427 Davidia involucrata HOM05D005374 ORTHO05D006534 3.7e-45 185.3 120 73.3
CiPaw.11G074900 Carya illinoinensis HOM05D005374 ORTHO05D006534 4.8e-45 184.9 119 73.9
Duzib205G0577 Durio zibethinus HOM05D005374 ORTHO05D006534 4.8e-45 184.9 119 73.9
Glyma.11G090700 Glycine max HOM05D005374 ORTHO05D006534 4.8e-45 184.9 120 76.7
Gohir.D12G204500 Gossypium hirsutum HOM05D005374 ORTHO05D006534 8.2e-45 184.1 119 73.9
Gorai.008G219400 Gossypium raimondii HOM05D005374 ORTHO05D006534 2.4e-44 182.6 119 73.1
Gohir.A12G201800 Gossypium hirsutum HOM05D005374 ORTHO05D006534 5.3e-44 181.4 119 72.3
Oeu015544.1 Olea europaea HOM05D005374 ORTHO05D006534 6.9e-44 181.0 119 73.1
Oeu046780.1 Olea europaea HOM05D005374 ORTHO05D006534 6.9e-44 181.0 119 73.9
TAR629G3354 Trochodendron aralioides HOM05D005374 ORTHO05D006534 6.9e-44 181.0 118 73.7
Medtr5g025560 Medicago truncatula HOM05D005374 ORTHO05D006534 9.1e-44 180.6 117 74.4
MSTRG.11863 Avicennia marina HOM05D005374 ORTHO05D006534 1.2e-43 180.3 119 73.1
Dinv41805 Davidia involucrata HOM05D005374 ORTHO05D006534 1.5e-43 179.9 119 70.6
Prupe.1G353600 Prunus persica HOM05D005374 ORTHO05D006534 1.5e-43 179.9 119 72.3
TPR.G8985 Trifolium pratense HOM05D005374 ORTHO05D006534 2.0e-43 179.5 119 73.1
Psat2g145440 Pisum sativum HOM05D005374 ORTHO05D006534 2.6e-43 179.1 119 72.3
Nn1g09345 Nelumbo nucifera HOM05D005374 ORTHO05D006534 7.7e-43 177.6 119 70.6
Nn7g37386 Nelumbo nucifera HOM05D005374 ORTHO05D006534 1.0e-42 177.2 119 71.4
PGR031G1488 Punica granatum HOM05D005374 ORTHO05D006534 1.7e-42 176.4 119 70.6
TAR629G2486 Trochodendron aralioides HOM05D005374 ORTHO05D006534 3.8e-42 175.3 119 69.7
Cc08_g05810 Coffea canephora HOM05D005374 ORTHO05D006534 5.0e-42 174.9 119 68.9
Manes.15G191300 Manihot esculenta HOM05D005374 ORTHO05D006534 8.5e-42 174.1 117 70.9
Nitab4.5_0002244g0130 Nicotiana tabacum HOM05D005374 ORTHO05D006534 8.5e-42 174.1 119 68.9
Eucgr.E01146 Eucalyptus grandis HOM05D005374 ORTHO05D006534 1.1e-41 173.7 119 69.7
unitig_747.g21918 Utricularia gibba HOM05D005374 ORTHO05D006534 1.9e-41 172.9 122 68.9
CAN.G998.19 Capsicum annuum HOM05D005374 ORTHO05D006534 3.2e-41 172.2 119 69.7
Potri.004G236200 Populus trichocarpa HOM05D005374 ORTHO05D006534 3.2e-41 172.2 119 70.6
Solyc08g075380.3 Solanum lycopersicum HOM05D005374 ORTHO05D006534 5.5e-41 171.4 119 68.9
Sopen08g024010 Solanum pennellii HOM05D005374 ORTHO05D006534 5.5e-41 171.4 119 68.9
PGSC0003DMG400001963 Solanum tuberosum HOM05D005374 ORTHO05D006534 7.2e-41 171.0 119 68.9
CSS0025693 Camellia sinensis var. sinensis HOM05D005374 ORTHO05D006534 1.6e-40 169.9 119 68.9
Actinidia14732 Actinidia chinensis HOM05D005374 ORTHO05D006534 2.1e-40 169.5 119 68.9
Migut.A00528 Erythranthe guttata HOM05D005374 ORTHO05D006534 2.1e-40 169.5 120 68.3
Nitab4.5_0000030g0530 Nicotiana tabacum HOM05D005374 ORTHO05D006534 2.1e-40 169.5 119 68.1
MD15G1000900 Malus domestica HOM05D005374 ORTHO05D006534 2.7e-40 169.1 118 68.6
SGA_v2.0_scaffold89G27377 Striga asiatica HOM05D005374 ORTHO05D006534 2.7e-40 169.1 119 68.9
PSO541G3556 Papaver somniferum HOM05D005374 ORTHO05D006534 6.1e-40 167.9 118 66.1
Sabra01G0180500 Salix brachista HOM05D005374 ORTHO05D006534 6.1e-40 167.9 119 69.7
ECA233G3708 Erigeron canadensis HOM05D004228 ORTHO05D005137 1.0e-39 167.2 120 64.2
Sed0016570 Sechium edule HOM05D005374 ORTHO05D006534 1.0e-39 167.2 119 64.7
Lsat_1_v5_gn_6_17221 Lactuca sativa HOM05D005374 ORTHO05D006534 1.4e-39 166.8 119 67.2
MELO3C010523.2 Cucumis melo HOM05D005374 ORTHO05D006534 1.8e-39 166.4 119 65.5
CsaV3_4G027900 Cucumis sativus L. HOM05D005374 ORTHO05D006534 1.8e-39 166.4 119 65.5
HanXRQChr17g0558081 Helianthus annuus HOM05D005374 ORTHO05D006534 1.8e-39 166.4 120 65.8
SalBow8G5130 Salvia bowleyana HOM05D005374 ORTHO05D006534 3.0e-39 165.6 126 66.7
CAN.G884.8 Capsicum annuum HOM05D005374 ORTHO05D006534 6.7e-39 164.5 120 66.7
MBI04_g06277_MAGBIO Magnolia biondii HOM05D005374 ORTHO05D006534 1.1e-38 163.7 119 65.5
Nitab4.5_0006438g0020 Nicotiana tabacum HOM05D005374 ORTHO05D006534 1.5e-38 163.3 119 64.7
FAN15G3753 Fragaria x ananassa HOM05D005374 ORTHO05D006534 2.6e-38 162.5 120 64.2
Atru.chr8.2626 Acer truncatum HOM05D005374 ORTHO05D006534 3.3e-38 162.2 118 68.6
FvH4_2g37370 Fragaria vesca HOM05D005374 ORTHO05D006534 4.4e-38 161.8 120 64.2
FAN27G3004 Fragaria x ananassa HOM05D005374 ORTHO05D006534 4.4e-38 161.8 120 64.2
RcHm_v2.0_Chr6g0304341 Rosa chinensis HOM05D005374 ORTHO05D006534 7.4e-38 161.0 119 63.9
GSVIVG01036874001 Vitis vinifera HOM05D005374 ORTHO05D006534 7.4e-38 161.0 119 66.4
Rhsim07G0140100 Rhododendron simsii HOM05D005374 ORTHO05D006534 9.7e-38 160.6 119 64.7
Hma1.2p1_1841F.1_g304960 Hydrangea macrophylla HOM05D005374 ORTHO05D006534 1.3e-37 160.2 119 65.5
QL12p004193 Quercus lobata HOM05D005374 ORTHO05D006534 1.3e-37 160.2 96 76.0
Eucgr.G01888 Eucalyptus grandis HOM05D005374 ORTHO05D006534 2.2e-37 159.5 116 67.2
Nitab4.5_0001175g0180 Nicotiana tabacum HOM05D005374 ORTHO05D006534 8.2e-37 157.5 121 63.6
THA.LOC104811099 Tarenaya hassleriana HOM05D005374 ORTHO05D006534 1.8e-36 156.4 119 63.0
Aa31LG9G7650 Aethionema arabicum HOM05D005374 ORTHO05D006534 5.3e-36 154.8 122 60.7
DCAR_004533 Daucus carota HOM05D005374 ORTHO05D006534 5.3e-36 154.8 118 62.7
CSS0021507 Camellia sinensis var. sinensis HOM05D005374 ORTHO05D006534 7.0e-36 154.5 117 64.1
CSS0023834 Camellia sinensis var. sinensis HOM05D005374 ORTHO05D006534 1.6e-35 153.3 122 63.9
EL10Ac5g12585 Beta vulgaris HOM05D005374 ORTHO05D006534 2.0e-35 152.9 121 62.0
Aqoxy3G00850 Aquilegia oxysepala HOM05D005374 ORTHO05D006534 4.5e-35 151.8 117 60.7
PGSC0003DMG400018477 Solanum tuberosum HOM05D005374 ORTHO05D006534 5.9e-35 151.4 120 62.5
Cpa.g.sc227.1 Carica papaya HOM05D005374 ORTHO05D006534 1.3e-34 150.2 96 66.7
Os06g0709100 Oryza sativa ssp. japonica HOM05D005374 ORTHO05D006534 2.9e-34 149.1 122 57.4
Peaxi162Scf00045g00731 Petunia axillaris HOM05D005374 ORTHO05D006534 2.9e-34 149.1 113 64.6
SEGI_04185 Sequoiadendron giganteum HOM05D005374 ORTHO05D006534 6.5e-34 147.9 122 57.4
DCAR_000721 Daucus carota HOM05D005374 ORTHO05D006534 8.5e-34 147.5 118 61.0
CSS0042781 Camellia sinensis var. sinensis HOM05D005374 ORTHO05D006534 1.1e-33 147.1 96 70.8
FAN20G2320 Fragaria x ananassa HOM05D005374 ORTHO05D006534 1.9e-33 146.4 98 66.3
Ciclev10012169m.g Citrus clementina HOM05D005374 ORTHO05D006534 7.2e-33 144.4 117 56.4
ATR0568G167 Amborella trichopoda HOM05D005374 ORTHO05D006534 1.2e-32 143.7 118 59.3
AUR62030411 Chenopodium quinoa HOM05D005374 ORTHO05D006534 2.1e-32 142.9 121 58.7
Lj8A3T11 Lonicera japonica HOM05D005374 ORTHO05D006534 2.7e-32 142.5 116 62.1
AUR62010482 Chenopodium quinoa HOM05D005374 ORTHO05D006534 4.7e-32 141.7 121 57.9
Peaxi162Scf00193g00717 Petunia axillaris HOM05D005374 ORTHO05D006534 4.7e-32 141.7 125 55.2
Ah.12g058460 Amaranthus hybridus HOM05D005374 ORTHO05D006534 4.0e-31 138.7 121 56.2
vmacro14239 Vaccinium macrocarpon HOM05D005374 ORTHO05D006534 5.2e-31 138.3 96 65.6
Hund14303 Selenicereus undatus HOM05D005374 ORTHO05D006534 6.7e-31 137.9 118 59.3
CDE02G3607 Ceratophyllum demersum HOM05D005374 ORTHO05D006534 1.2e-30 137.1 125 52.0
Mapoly0004s0051 Marchantia polymorpha HOM05D005374 ORTHO05D006534 1.8e-28 129.8 122 44.3
Sc22g0002240 Simmondsia chinensis HOM05D005374 ORTHO05D006534 4.1e-28 128.6 97 59.8
Pp3c9_17990 Physcomitrium patens HOM05D005374 ORTHO05D006534 7.0e-28 127.9 127 46.5
MD08G1001600 Malus domestica HOM05D005374 ORTHO05D006534 3.5e-27 125.6 102 59.8
AL8G13440 Arabidopsis lyrata HOM05D005374 ORTHO05D006534 7.2e-25 117.9 114 51.8
CARHR176710 Cardamine hirsuta HOM05D005374 ORTHO05D006534 2.1e-24 116.3 87 60.9
Carub.0008s0275 Capsella rubella HOM05D005374 ORTHO05D006534 2.7e-24 115.9 87 59.8
AT5G45360 Arabidopsis thaliana HOM05D005374 ORTHO05D006534 4.7e-24 115.2 105 53.3
HPP92_022746 Vanilla planifolia HOM05D005374 ORTHO05D006534 6.8e-23 111.3 118 50.0
Sp2g10310 Schrenkiella parvula HOM05D005374 ORTHO05D006534 1.7e-21 106.7 114 47.4
Thhalv10000968m.g Eutrema salsugineum HOM05D005374 ORTHO05D006534 2.2e-21 106.3 87 55.2
SMO353G0174 Selaginella moellendorffii HOM05D005374 ORTHO05D006534 1.1e-20 104.0 122 42.6
Eucgr.B01591 Eucalyptus grandis HOM05D005374 ORTHO05D006534 4.1e-20 102.1 67 67.2
ClCG11G016070 Citrullus lanatus HOM05D005374 ORTHO05D006534 7.0e-20 101.3 141 42.6
arahy.Tifrunner.gnm1.ann1.ZNC245 Arachis hypogaea HOM05D005374 ORTHO05D006534 2.0e-19 99.8 49 98.0
SEGI_09240 Sequoiadendron giganteum HOM05D005374 ORTHO05D006534 2.7e-19 99.4 116 42.2
Nn1g08747 Nelumbo nucifera HOM05D005374 ORTHO05D006534 7.7e-19 97.8 81 55.6
Duzib084G1112 Durio zibethinus HOM05D005374 ORTHO05D006534 2.5e-17 92.8 57 73.7
BcaB07g30892 Brassica carinata HOM05D005374 ORTHO05D006534 9.5e-17 90.9 114 40.4
Zm00001eb227600 Zea mays HOM05D005374 ORTHO05D006534 4.7e-16 88.6 60 63.3
Actinidia26789 Actinidia chinensis HOM05D005374 ORTHO05D006534 1.0e-15 87.4 76 57.9
BcaC06g31556 Brassica carinata HOM05D005374 ORTHO05D006534 5.2e-15 85.1 87 44.8
BcaC04g21776 Brassica carinata HOM05D005374 ORTHO05D006534 2.0e-14 83.2 114 36.8
BcaC06g34439 Brassica carinata HOM05D005374 ORTHO05D006534 2.6e-14 82.8 87 43.7
A06p46630 Brassica napus HOM05D005374 ORTHO05D006534 2.6e-14 82.8 87 43.7
C07p28440 Brassica napus HOM05D005374 ORTHO05D006534 2.6e-14 82.8 87 43.7
BolC7t43384H Brassica oleracea HOM05D005374 ORTHO05D006534 2.6e-14 82.8 87 43.7
BraA06t27536Z Brassica rapa HOM05D005374 ORTHO05D006534 2.6e-14 82.8 87 43.7
A09p21700 Brassica napus HOM05D005374 ORTHO05D006534 7.5e-14 81.3 114 37.7
C09p27770 Brassica napus HOM05D005374 ORTHO05D006534 7.5e-14 81.3 114 37.7
CBR_g46850 Chara braunii HOM05D005374 ORTHO05D006534 2.8e-13 79.3 120 36.7
MCO16G622 Micromonas commoda HOM05D005374 ORTHO05D006534 2.7e-11 72.8 90 41.1


User provided reference genes

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