Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.5TP18E Arachis hypogaea HOM05D006332 ORTHO05D008421 1.2e-269 932.6 470 100.0
arahy.Tifrunner.gnm1.ann1.I941VF Arachis hypogaea HOM05D006332 ORTHO05D008421 4.2e-246 854.4 432 99.1
Phvul.002G227700 Phaseolus vulgaris HOM05D006332 ORTHO05D008421 1.1e-209 733.4 426 86.4
Lalb_Chr16g0383661 Lupinus albus HOM05D006332 ORTHO05D008421 5.4e-209 731.1 437 82.8
Glyma.13G181100 Glycine max HOM05D006332 ORTHO05D008421 1.6e-208 729.6 435 83.9
Lj4g0020818 Lotus japonicus HOM05D006332 ORTHO05D008421 1.0e-207 726.9 430 84.7
Ca_18532_v3 Cicer arietinum L. HOM05D006332 ORTHO05D008421 2.3e-207 725.7 439 83.1
VMungo0251G1219 Vigna mungo HOM05D006332 ORTHO05D008421 8.6e-207 723.8 438 82.6
Medtr4g088960 Medicago truncatula HOM05D006332 ORTHO05D008421 4.7e-205 718.0 442 82.4
TPR.G12057 Trifolium pratense HOM05D006332 ORTHO05D008421 4.7e-205 718.0 437 83.1
Psat7g112800 Pisum sativum HOM05D006332 ORTHO05D008421 5.2e-204 714.5 435 83.7
Glyma.07G195200 Glycine max HOM05D006332 ORTHO05D008421 2.6e-203 712.2 435 83.4
CiPaw.09G057500 Carya illinoinensis HOM05D006332 ORTHO05D008421 3.3e-190 668.7 433 76.7
Gohir.D06G130900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 3.1e-188 662.1 438 74.4
Thecc.06G190700 Theobroma cacao HOM05D006332 ORTHO05D008421 5.2e-188 661.4 438 74.9
Actinidia01892 Actinidia chinensis HOM05D006332 ORTHO05D008421 4.4e-187 658.3 437 74.8
Prupe.4G044000 Prunus persica HOM05D006332 ORTHO05D008421 1.7e-186 656.4 440 75.2
Duzib160G0593 Durio zibethinus HOM05D006332 ORTHO05D008421 2.2e-186 656.0 435 74.9
QL05p039635 Quercus lobata HOM05D006332 ORTHO05D008421 3.8e-186 655.2 440 75.0
Cpa.g.sc27.66 Carica papaya HOM05D006332 ORTHO05D008421 4.9e-186 654.8 429 75.1
Gohir.A06G126100 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.4e-185 653.3 440 73.6
MELO3C002589.2 Cucumis melo HOM05D006332 ORTHO05D008421 3.2e-185 652.1 434 74.7
CsaV3_1G012160 Cucumis sativus L. HOM05D006332 ORTHO05D008421 3.2e-185 652.1 434 74.7
Lj1C1207T6 Lonicera japonica HOM05D006332 ORTHO05D008421 4.2e-185 651.7 426 75.1
Sed0003237 Sechium edule HOM05D006332 ORTHO05D008421 9.3e-185 650.6 433 73.9
COL.COLO4_31500 Corchorus olitorius HOM05D006332 ORTHO05D008421 2.1e-184 649.4 451 73.6
Duzib235G1125 Durio zibethinus HOM05D006332 ORTHO05D008421 2.1e-184 649.4 435 74.3
RcHm_v2.0_Chr5g0008031 Rosa chinensis HOM05D006332 ORTHO05D008421 2.7e-184 649.0 440 74.5
ClCG03G005920 Citrullus lanatus HOM05D006332 ORTHO05D008421 7.8e-184 647.5 435 74.3
Dinv07538 Davidia involucrata HOM05D006332 ORTHO05D008421 3.0e-183 645.6 429 75.8
Gorai.010G152800 Gossypium raimondii HOM05D006332 ORTHO05D008421 6.6e-183 644.4 458 71.0
FAN16G1437 Fragaria x ananassa HOM05D006332 ORTHO05D008421 1.9e-182 642.9 443 74.0
MD10G1296600 Malus domestica HOM05D006332 ORTHO05D008421 2.5e-182 642.5 446 74.0
FvH4_3g04870 Fragaria vesca HOM05D006332 ORTHO05D008421 5.6e-182 641.3 446 73.5
PGR004G2698 Punica granatum HOM05D006332 ORTHO05D008421 7.3e-182 641.0 433 74.1
GSVIVG01002030001 Vitis vinifera HOM05D006332 ORTHO05D008421 9.6e-182 640.6 431 74.7
FAN21G2488 Fragaria x ananassa HOM05D003523 ORTHO05D004493 1.6e-181 639.8 431 74.9
Haze_06500 Corylus avellana HOM05D006332 ORTHO05D008421 1.1e-180 637.1 443 72.9
CANSAT35G2021 Cannabis sativa HOM05D006332 ORTHO05D008421 3.1e-180 635.6 434 74.2
FAN11G2101 Fragaria x ananassa HOM05D003523 ORTHO05D004493 6.9e-180 634.4 438 73.5
Cc02_g13080 Coffea canephora HOM05D006332 ORTHO05D008421 2.0e-179 632.9 430 73.7
TWI38G1702 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 2.2e-178 629.4 437 72.5
TAR629G2846 Trochodendron aralioides HOM05D006332 ORTHO05D008421 3.8e-178 628.6 428 73.1
MD05G1316100 Malus domestica HOM05D006332 ORTHO05D008421 1.4e-177 626.7 446 71.5
Potri.004G040500 Populus trichocarpa HOM05D006332 ORTHO05D008421 5.4e-177 624.8 432 72.9
Manes.16G025600 Manihot esculenta HOM05D006332 ORTHO05D008421 1.2e-176 623.6 431 72.6
Aqoxy1G02544 Aquilegia oxysepala HOM05D006332 ORTHO05D008421 6.0e-176 621.3 451 68.1
Eucgr.D00641 Eucalyptus grandis HOM05D006332 ORTHO05D008421 7.9e-176 620.9 430 73.3
PSO063G3883 Papaver somniferum HOM05D006332 ORTHO05D008421 7.9e-176 620.9 441 68.3
Gohir.A10G024200 Gossypium hirsutum HOM05D006332 ORTHO05D008421 4.3e-174 615.1 438 70.1
Gorai.011G026200 Gossypium raimondii HOM05D006332 ORTHO05D008421 7.4e-174 614.4 440 70.0
Hma1.2p1_0881F.1_g231970 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 7.4e-174 614.4 425 72.7
THA.LOC104817534 Tarenaya hassleriana HOM05D006332 ORTHO05D008421 1.3e-173 613.6 431 70.5
PSO782G1256 Papaver somniferum HOM05D006332 ORTHO05D008421 3.7e-173 612.1 441 67.6
Solyc10g008990.4 Solanum lycopersicum HOM05D006332 ORTHO05D008421 8.1e-173 610.9 434 70.3
Gohir.D10G024900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 4.0e-172 608.6 438 69.9
PGSC0003DMG400022831 Solanum tuberosum HOM05D006332 ORTHO05D008421 5.3e-172 608.2 437 69.6
TWI63G1670 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 7.6e-171 604.4 459 67.8
MSTRG.13186 Avicennia marina HOM05D006332 ORTHO05D008421 9.9e-171 604.0 430 70.9
Oeu053924.1 Olea europaea HOM05D006332 ORTHO05D008421 1.3e-170 603.6 448 69.0
Migut.H01511 Erythranthe guttata HOM05D006332 ORTHO05D008421 2.9e-170 602.4 434 69.6
CSS0022240 Camellia sinensis var. sinensis HOM05D006332 ORTHO05D008421 6.0e-168 594.7 427 71.0
HanXRQChr04g0124141 Helianthus annuus HOM05D006332 ORTHO05D008421 3.0e-167 592.4 426 70.4
Carub.0004s3069 Capsella rubella HOM05D006332 ORTHO05D008421 5.1e-167 591.7 434 67.5
Ciclev10015324m.g Citrus clementina HOM05D006332 ORTHO05D008421 1.5e-166 590.1 436 69.0
AT2G47960 Arabidopsis thaliana HOM05D006332 ORTHO05D008421 5.6e-166 588.2 432 67.4
AL4G47550 Arabidopsis lyrata HOM05D006332 ORTHO05D008421 7.4e-166 587.8 432 67.4
BcaC02g12534 Brassica carinata HOM05D006332 ORTHO05D008421 2.1e-165 586.3 431 67.7
C04p00010 Brassica napus HOM05D004682 ORTHO05D006197 6.2e-165 584.7 427 68.1
BolC4t21648H Brassica oleracea HOM05D004682 ORTHO05D006197 6.2e-165 584.7 427 68.1
A05p00090 Brassica napus HOM05D004682 ORTHO05D006197 1.1e-164 583.9 427 67.7
BraA05t19005Z Brassica rapa HOM05D004682 ORTHO05D006197 1.1e-164 583.9 427 67.7
ATR0680G340 Amborella trichopoda HOM05D006332 ORTHO05D008421 1.4e-164 583.6 429 69.9
Thhalv10018568m.g Eutrema salsugineum HOM05D006332 ORTHO05D008421 2.4e-164 582.8 434 66.4
Sp4g29880 Schrenkiella parvula HOM05D006332 ORTHO05D008421 5.3e-164 581.6 433 65.8
HanXRQChr01g0003951 Helianthus annuus HOM05D006332 ORTHO05D008421 9.0e-164 580.9 427 69.1
Nn6g34413 Nelumbo nucifera HOM05D006332 ORTHO05D008421 4.5e-163 578.6 432 66.4
EL10Ac8g20347 Beta vulgaris HOM05D006332 ORTHO05D008421 5.8e-163 578.2 426 68.5
Peaxi162Scf00530g00823 Petunia axillaris HOM05D006332 ORTHO05D008421 3.2e-161 572.4 433 67.9
CDE08G0172 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 7.1e-161 571.2 429 66.4
HPP92_001753 Vanilla planifolia HOM05D006332 ORTHO05D008421 2.1e-160 569.7 444 64.0
BcaB02g08727 Brassica carinata HOM05D006332 ORTHO05D008421 2.7e-160 569.3 438 65.8
Nitab4.5_0003942g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 2.7e-160 569.3 449 65.7
ECA236G3091 Erigeron canadensis HOM05D006332 ORTHO05D008421 6.7e-159 564.7 442 65.6
Sabra04G0025000 Salix brachista HOM05D006332 ORTHO05D008421 1.6e-157 560.1 495 62.2
ECA248G3961 Erigeron canadensis HOM05D006332 ORTHO05D008421 2.6e-155 552.7 429 65.3
AUR62016979 Chenopodium quinoa HOM05D006332 ORTHO05D008421 5.9e-155 551.6 436 66.3
Zm00001eb044550 Zea mays HOM05D006332 ORTHO05D008421 1.2e-152 543.9 433 64.7
CARHR143350 Cardamine hirsuta HOM05D006332 ORTHO05D008421 7.4e-150 534.6 381 70.6
Nn1g04020 Nelumbo nucifera HOM05D006332 ORTHO05D008421 2.2e-149 533.1 361 74.0
AUR62014792 Chenopodium quinoa HOM05D006332 ORTHO05D008421 6.3e-149 531.6 453 63.6
Hma1.2p1_0126F.1_g059220 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 6.3e-149 531.6 450 62.0
Aa31LG1G29380 Aethionema arabicum HOM05D006332 ORTHO05D008421 5.3e-148 528.5 434 62.7
MBI17_g03748_MAGBIO Magnolia biondii HOM05D006332 ORTHO05D008421 7.7e-147 524.6 431 64.0
Cfa000416 Carpinus fangiana HOM05D006332 ORTHO05D008421 1.7e-146 523.5 381 69.6
Lsat_1_v5_gn_7_19001 Lactuca sativa HOM05D006332 ORTHO05D008421 1.7e-146 523.5 424 63.9
SGA_v2.0_scaffold49G18281 Striga asiatica HOM05D006332 ORTHO05D008421 3.6e-144 515.8 457 60.2
Hma1.2p1_0881F.1_g231960 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 6.7e-143 511.5 338 76.0
DCAR_004087 Daucus carota HOM05D006332 ORTHO05D008421 1.4e-137 493.8 344 72.1
Hund21245 Selenicereus undatus HOM05D006332 ORTHO05D008421 2.2e-133 479.9 433 59.4
Lsat_1_v5_gn_1_127821 Lactuca sativa HOM05D006332 ORTHO05D008421 2.8e-133 479.6 430 59.5
unitig_8.g3355 Utricularia gibba HOM05D006332 ORTHO05D008421 2.9e-130 469.5 451 58.1
Nitab4.5_0009738g0010 Nicotiana tabacum HOM05D006332 ORTHO05D008421 8.8e-127 458.0 367 65.1
Duzib192G0908 Durio zibethinus HOM05D006332 ORTHO05D008421 4.4e-126 455.7 366 64.5
Pp3c1_28670 Physcomitrium patens HOM05D006332 ORTHO05D008421 5.3e-124 448.7 437 51.5
AagrBONN_evm.TU.Sc2ySwM_344.1820 Anthoceros agrestis HOM05D006332 ORTHO05D008421 2.0e-123 446.8 437 50.8
SMO364G0571 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 1.7e-122 443.7 438 52.3
Sc24g0000810 Simmondsia chinensis HOM05D006332 ORTHO05D008421 9.4e-121 438.0 611 44.0
Mapoly0122s0006 Marchantia polymorpha HOM05D006332 ORTHO05D008421 4.7e-120 435.6 432 50.2
Atru.chr10.1934 Acer truncatum HOM05D006332 ORTHO05D008421 1.0e-119 434.5 293 74.7
CAN.G413.15 Capsicum annuum HOM05D006332 ORTHO05D008421 8.8e-119 431.4 328 66.5
CBR_g24248 Chara braunii HOM05D006332 ORTHO05D008421 5.1e-90 335.9 451 41.9
SMO364G0067 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 1.9e-89 334.0 310 54.5
Gohir.A10G024325 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.6e-88 330.9 208 79.8
SHI01800 Sapria himalayana HOM05D006332 ORTHO05D008421 2.1e-80 303.9 278 59.7
Nitab4.5_0009738g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 3.6e-72 276.6 240 57.9
Sopen10g004770 Solanum pennellii HOM05D006332 ORTHO05D008421 6.4e-69 265.8 209 61.2
Gohir.A10G024350 Gossypium hirsutum HOM05D006332 ORTHO05D008421 6.2e-48 196.1 162 59.3
PRCOL_00003805 Prasinoderma coloniale HOM05D006332 ORTHO05D008421 2.3e-42 177.6 404 32.2
SHI01798 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-37 160.6 205 48.3
Atru.chr10.1933 Acer truncatum HOM05D006332 ORTHO05D008421 3.3e-33 147.1 117 60.7
Ciclev10009862m.g Citrus clementina HOM05D006332 ORTHO05D008421 6.3e-32 142.9 102 68.6
PSO017G7020 Papaver somniferum HOM05D006332 ORTHO05D000676 4.5e-22 110.2 110 47.3
TPR.G24681 Trifolium pratense HOM05D006332 ORTHO05D001923 5.9e-22 109.8 62 83.9
PSO170G5489 Papaver somniferum HOM05D006332 ORTHO05D008421 1.2e-19 102.1 96 49.0
Nitab4.5_0009738g0030 Nicotiana tabacum HOM05D006332 ORTHO05D008421 2.8e-16 90.9 91 54.9
CDE02G4141 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 2.6e-09 67.8 51 62.7
Os10g0498800 Oryza sativa ssp. japonica HOM05D006332 ORTHO05D008421 5.7e-09 66.6 58 51.7
TPR.G32042 Trifolium pratense HOM05D006332 ORTHO05D034078 1.7e-08 65.1 38 81.6
Cpa.g.sc777.3 Carica papaya HOM05D006332 ORTHO05D034078 4.5e-06 57.0 34 70.6
Medtr2g027310 Medicago truncatula HOM05D006332 ORTHO05D034078 4.5e-06 57.0 34 76.5


User provided reference genes

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