Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.5SWH0M Arachis hypogaea HOM05D000444 ORTHO05D082203 4.9e-85 317.8 163 100.0
arahy.Tifrunner.gnm1.ann1.I6KC6I Arachis hypogaea HOM05D000444 ORTHO05D009475 2.2e-24 116.3 196 45.4
arahy.Tifrunner.gnm1.ann1.K6XKIL Arachis hypogaea HOM05D000444 ORTHO05D000489 1.2e-17 94.0 159 45.3
arahy.Tifrunner.gnm1.ann1.KU25FL Arachis hypogaea HOM05D000147 ORTHO05D001254 2.6e-17 92.8 74 68.9
arahy.Tifrunner.gnm1.ann1.PHSJ1F Arachis hypogaea HOM05D000147 ORTHO05D001254 9.8e-17 90.9 67 74.6
arahy.Tifrunner.gnm1.ann1.JH71K5 Arachis hypogaea HOM05D000492 ORTHO05D021054 2.4e-15 86.3 66 75.8
arahy.Tifrunner.gnm1.ann1.C182CV Arachis hypogaea HOM05D000444 ORTHO05D000489 1.8e-10 70.1 37 86.5
arahy.Tifrunner.gnm1.ann1.FAW6Z3 Arachis hypogaea HOM05D000444 ORTHO05D000489 1.8e-10 70.1 37 86.5
Ca_19402_v3 Cicer arietinum L. HOM05D000444 ORTHO05D000489 8.9e-10 67.8 37 83.8
Lj3g0006656 Lotus japonicus HOM05D000444 ORTHO05D000489 3.4e-09 65.9 37 83.8
Lalb_Chr19g0136521 Lupinus albus HOM05D000444 ORTHO05D000489 4.4e-09 65.5 37 81.1
Medtr4g053620 Medicago truncatula HOM05D000444 ORTHO05D000489 5.8e-09 65.1 37 81.1
Glyma.12G088500 Glycine max HOM05D000444 ORTHO05D000489 9.8e-09 64.3 37 78.4
arahy.Tifrunner.gnm1.ann1.F3ZYXZ Arachis hypogaea HOM05D000444 ORTHO05D000489 1.3e-08 63.9 37 81.1
Psat7g188160 Pisum sativum HOM05D000444 ORTHO05D000489 1.3e-08 63.9 37 78.4
Sed0010294 Sechium edule HOM05D000444 ORTHO05D000489 1.3e-08 63.9 47 59.6
TPR.G17221 Trifolium pratense HOM05D001468 ORTHO05D001404 1.7e-08 63.5 36 80.6
Phvul.011G093500 Phaseolus vulgaris HOM05D000444 ORTHO05D000489 2.9e-08 62.8 37 75.7
MELO3C021425.2 Cucumis melo HOM05D000444 ORTHO05D000489 3.7e-08 62.4 37 73.0
CsaV3_6G015000 Cucumis sativus L. HOM05D000444 ORTHO05D000489 4.9e-08 62.0 37 73.0
Lalb_Chr00c36g0408741 Lupinus albus HOM05D000444 ORTHO05D000489 6.4e-08 61.6 38 73.7
arahy.Tifrunner.gnm1.ann1.P8EEHZ Arachis hypogaea HOM05D000444 ORTHO05D000489 8.3e-08 61.2 47 66.0
Lalb_Chr24g0392941 Lupinus albus HOM05D000444 ORTHO05D000489 8.3e-08 61.2 37 75.7
ClCG02G022160 Citrullus lanatus HOM05D000444 ORTHO05D000489 1.1e-07 60.8 37 70.3
RcHm_v2.0_Chr5g0044341 Rosa chinensis HOM05D000444 ORTHO05D000489 1.1e-07 60.8 37 70.3
VMungo1127G0581 Vigna mungo HOM05D000444 ORTHO05D000489 1.1e-07 60.8 37 73.0
Sabra09G0128800 Salix brachista HOM05D000444 ORTHO05D000489 1.9e-07 60.1 38 65.8
Glyma.12G184366 Glycine max HOM05D000444 ORTHO05D000489 2.4e-07 59.7 37 70.3
FvH4_3g24760 Fragaria vesca HOM05D000444 ORTHO05D000489 3.2e-07 59.3 37 70.3
FAN11G0940 Fragaria x ananassa HOM05D000444 ORTHO05D000489 3.2e-07 59.3 37 70.3
FAN21G0844 Fragaria x ananassa HOM05D000444 ORTHO05D000489 3.2e-07 59.3 37 70.3
FAN25G1752 Fragaria x ananassa HOM05D000444 ORTHO05D000489 3.2e-07 59.3 37 70.3
MD03G1143100 Malus domestica HOM05D000444 ORTHO05D000489 4.1e-07 58.9 37 62.2
MD11G1163900 Malus domestica HOM05D000444 ORTHO05D000489 4.1e-07 58.9 39 61.5
Prupe.6G128600 Prunus persica HOM05D000444 ORTHO05D000489 4.1e-07 58.9 37 64.9
arahy.Tifrunner.gnm1.ann1.LH9WUE Arachis hypogaea HOM05D000444 ORTHO05D000489 5.4e-07 58.5 37 70.3
arahy.Tifrunner.gnm1.ann1.NDX0CI Arachis hypogaea HOM05D000444 ORTHO05D000489 5.4e-07 58.5 37 70.3
Manes.04G004400 Manihot esculenta HOM05D000444 ORTHO05D000489 7.1e-07 58.2 37 67.6
TPR.G4465 Trifolium pratense HOM05D000444 ORTHO05D000489 1.2e-06 57.4 37 67.6
CiPaw.13G136600 Carya illinoinensis HOM05D000444 ORTHO05D000489 2.7e-06 56.2 37 67.6
MELO3C004732.2 Cucumis melo HOM05D000444 ORTHO05D000489 3.5e-06 55.8 37 62.2
Medtr2g086300 Medicago truncatula HOM05D000444 ORTHO05D000489 3.5e-06 55.8 37 64.9
Psat5g257200 Pisum sativum HOM05D000444 ORTHO05D000489 3.5e-06 55.8 37 64.9
QL01p012384 Quercus lobata HOM05D000444 ORTHO05D000489 3.5e-06 55.8 37 64.9
ClCG01G012320 Citrullus lanatus HOM05D000444 ORTHO05D000489 4.6e-06 55.5 37 62.2
CsaV3_1G014750 Cucumis sativus L. HOM05D000444 ORTHO05D000489 4.6e-06 55.5 37 62.2
Cfa010020 Carpinus fangiana HOM05D000444 ORTHO05D000489 6.0e-06 55.1 37 67.6
Haze_23381 Corylus avellana HOM05D000444 ORTHO05D000489 6.0e-06 55.1 37 67.6
Eucgr.B03856 Eucalyptus grandis HOM05D000444 ORTHO05D000489 7.8e-06 54.7 37 62.2
Lj3g0004023 Lotus japonicus HOM05D000444 ORTHO05D000489 7.8e-06 54.7 37 67.6


User provided reference genes

Program Settings