Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.5S904D Arachis hypogaea HOM05D001778 ORTHO05D005872 1.6e-169 599.4 305 100.0
arahy.Tifrunner.gnm1.ann1.M8SWBU Arachis hypogaea HOM05D001778 ORTHO05D005872 5.1e-75 285.4 160 91.2
arahy.Tifrunner.gnm1.ann1.STSP6P Arachis hypogaea HOM05D001778 ORTHO05D005872 5.1e-75 285.4 160 91.2
Glyma.01G151700 Glycine max HOM05D001778 ORTHO05D005872 3.5e-52 209.5 170 71.2
arahy.Tifrunner.gnm1.ann1.70U8WL Arachis hypogaea HOM05D002877 ORTHO05D015430 6.7e-51 205.3 216 60.2
Glyma.09G216900 Glycine max HOM05D001778 ORTHO05D005872 1.1e-50 204.5 167 69.5
VMungo1215G1640 Vigna mungo HOM05D000351 ORTHO05D005872 1.9e-50 203.8 166 69.3
Phvul.002G123800 Phaseolus vulgaris HOM05D001778 ORTHO05D005872 4.3e-50 202.6 166 69.9
Lj2g0013343 Lotus japonicus HOM05D001778 ORTHO05D005872 5.3e-48 195.7 165 69.1
Lalb_Chr16g0380521 Lupinus albus HOM05D001778 ORTHO05D005872 2.1e-44 183.7 166 65.7
Medtr5g026260 Medicago truncatula HOM05D001778 ORTHO05D005872 1.0e-43 181.4 165 64.8
Lalb_Chr09g0325111 Lupinus albus HOM05D001778 ORTHO05D005872 1.7e-41 174.1 166 61.4
TPR.G30317 Trifolium pratense HOM05D001778 ORTHO05D005872 5.3e-40 169.1 165 61.2
Glyma.16G076000 Glycine max HOM05D001778 ORTHO05D005872 2.0e-39 167.2 173 60.1
Glyma.16G107700 Glycine max HOM05D001778 ORTHO05D005872 2.0e-39 167.2 173 59.0
Psat2g144280 Pisum sativum HOM05D001778 ORTHO05D005872 7.7e-39 165.2 160 64.4
Phvul.003G277700 Phaseolus vulgaris HOM05D001778 ORTHO05D005872 7.2e-37 158.7 172 57.0
Ca_22469_v3 Cicer arietinum L. HOM05D001778 ORTHO05D005872 4.2e-29 132.9 172 52.3
Haze_08034 Corylus avellana HOM05D001778 ORTHO05D005872 5.5e-29 132.5 156 55.1
CiPaw.12G053400 Carya illinoinensis HOM05D001778 ORTHO05D005872 2.1e-28 130.6 162 56.2
Ca_25064_v3 Cicer arietinum L. HOM05D001778 ORTHO05D005872 2.1e-28 130.6 165 50.3
Cfa012632 Carpinus fangiana HOM05D001778 ORTHO05D005872 2.7e-28 130.2 156 54.5
CiPaw.11G077400 Carya illinoinensis HOM05D001778 ORTHO05D005872 1.8e-27 127.5 161 54.0
VMungo0251G2978 Vigna mungo HOM05D001778 ORTHO05D005872 3.0e-27 126.7 170 48.2
Dinv09422 Davidia involucrata HOM05D001778 ORTHO05D005872 9.7e-26 121.7 150 52.7
Dinv37445 Davidia involucrata HOM05D001778 ORTHO05D005872 4.1e-24 116.3 159 47.2
MD06G1013000 Malus domestica HOM05D001778 ORTHO05D005872 4.5e-23 112.8 169 46.7
TPR.G16795 Trifolium pratense HOM05D001778 ORTHO05D005872 4.5e-23 112.8 145 53.1
FAN18G0495 Fragaria x ananassa HOM05D001778 ORTHO05D005872 7.7e-23 112.1 172 45.3
FvH4_5g24480 Fragaria vesca HOM05D001778 ORTHO05D005872 1.3e-22 111.3 172 45.3
FAN13G1529 Fragaria x ananassa HOM05D001778 ORTHO05D005872 1.3e-22 111.3 172 45.3
FAN04G2563 Fragaria x ananassa HOM05D001778 ORTHO05D005872 1.7e-22 110.9 172 44.8
Manes.17G002200 Manihot esculenta HOM05D001778 ORTHO05D005872 1.7e-22 110.9 172 43.0
Sabra01G0098000 Salix brachista HOM05D001778 ORTHO05D005872 3.8e-22 109.8 138 52.9
Sed0011927 Sechium edule HOM05D001778 ORTHO05D005872 5.0e-22 109.4 155 46.5
FAN13G0610 Fragaria x ananassa HOM05D001778 ORTHO05D005872 6.5e-22 109.0 172 44.8
Potri.001G127100 Populus trichocarpa HOM05D001778 ORTHO05D005872 1.1e-21 108.2 174 46.0
Prupe.5G015800 Prunus persica HOM05D001778 ORTHO05D005872 1.1e-21 108.2 154 50.0
FAN08G2077 Fragaria x ananassa HOM05D001778 ORTHO05D005872 2.5e-21 107.1 172 43.6
GSVIVG01036912001 Vitis vinifera HOM05D001778 ORTHO05D005872 2.5e-21 107.1 141 52.5
TWI60G1341 Tripterygium wilfordii HOM05D001778 ORTHO05D005872 3.2e-21 106.7 172 42.4
ClCG07G011180 Citrullus lanatus HOM05D001778 ORTHO05D005872 1.2e-20 104.8 149 47.7
RcHm_v2.0_Chr7g0214911 Rosa chinensis HOM05D001778 ORTHO05D005872 8.0e-20 102.1 170 40.0
MD16G1287000 Malus domestica HOM05D001778 ORTHO05D005872 5.2e-19 99.4 164 44.5
CsaV3_4G007070 Cucumis sativus L. HOM05D001778 ORTHO05D005872 6.7e-19 99.0 133 51.1
MELO3C016212.2 Cucumis melo HOM05D001778 ORTHO05D005872 2.0e-18 97.4 131 49.6
AUR62017397 Chenopodium quinoa HOM05D001778 ORTHO05D005872 2.6e-18 97.1 130 49.2
Psat4g108480 Pisum sativum HOM05D001778 ORTHO05D005872 5.7e-18 95.9 128 53.1
CSS0047621 Camellia sinensis var. sinensis HOM05D001778 ORTHO05D005872 7.5e-18 95.5 147 44.9
Hma1.2p1_0262F.1_g105213 Hydrangea macrophylla HOM05D001778 ORTHO05D005872 1.3e-17 94.7 140 47.1
Hma1.2p1_1969F.1_g309500 Hydrangea macrophylla HOM05D001778 ORTHO05D005872 1.3e-17 94.7 140 47.1
TAR629G1808 Trochodendron aralioides HOM05D001778 ORTHO05D005872 1.3e-17 94.7 156 46.8
Nn3g19165 Nelumbo nucifera HOM05D001778 ORTHO05D005872 1.7e-17 94.4 150 44.0
Eucgr.D02574 Eucalyptus grandis HOM05D001778 ORTHO05D005872 2.8e-17 93.6 150 43.3
AUR62010503 Chenopodium quinoa HOM05D001778 ORTHO05D005872 4.8e-17 92.8 126 49.2
PGR031G1520 Punica granatum HOM05D001778 ORTHO05D005872 4.8e-17 92.8 181 40.3
Potri.003G106600 Populus trichocarpa HOM05D001778 ORTHO05D005872 6.3e-17 92.4 160 45.6
CSS0021828 Camellia sinensis var. sinensis HOM05D001778 ORTHO05D005872 8.2e-17 92.0 164 42.1
Cpa.g.sc24.54 Carica papaya HOM05D001778 ORTHO05D005872 2.4e-16 90.5 134 47.0
Nitab4.5_0000623g0050 Nicotiana tabacum HOM05D001778 ORTHO05D005872 2.4e-16 90.5 135 45.9
EL10Ac5g12604 Beta vulgaris HOM05D001778 ORTHO05D005872 4.1e-16 89.7 179 37.4
Sabra03G0073400 Salix brachista HOM05D001778 ORTHO05D005872 4.1e-16 89.7 174 42.5
Hund14314 Selenicereus undatus HOM05D001778 ORTHO05D005872 2.0e-15 87.4 149 43.6
vmacro00111 Vaccinium macrocarpon HOM05D001778 ORTHO05D005872 2.7e-15 87.0 157 38.9
Ah.02g116320 Amaranthus hybridus HOM05D007105 ORTHO05D009304 1.7e-14 84.3 166 40.4
Sed0015190 Sechium edule HOM05D001778 ORTHO05D005872 1.7e-14 84.3 155 41.3
Cc08_g04610 Coffea canephora HOM05D001778 ORTHO05D005872 2.9e-14 83.6 159 39.6
Rhsim07G0141300 Rhododendron simsii HOM05D001778 ORTHO05D005872 2.9e-14 83.6 107 51.4
Atru.chr6.2141 Acer truncatum HOM05D001778 ORTHO05D005872 5.0e-14 82.8 117 51.3
Actinidia01233 Actinidia chinensis HOM05D001778 ORTHO05D005872 6.5e-14 82.4 160 38.8
arahy.Tifrunner.gnm1.ann1.6FZ3DA Arachis hypogaea HOM05D000140 ORTHO05D086441 8.5e-14 82.0 181 34.8
Lj8C369T4 Lonicera japonica HOM05D001778 ORTHO05D005872 1.1e-13 81.6 163 40.5
Actinidia30333 Actinidia chinensis HOM05D001778 ORTHO05D005872 4.2e-13 79.7 166 38.6
Ah.12g058300 Amaranthus hybridus HOM05D000027 ORTHO05D005872 5.5e-13 79.3 215 34.9
Medtr8g072020 Medicago truncatula HOM05D001778 ORTHO05D005872 5.5e-13 79.3 137 42.3
Peaxi162Scf00014g01720 Petunia axillaris HOM05D001778 ORTHO05D005872 9.4e-13 78.6 135 41.5
Sopen08g023710 Solanum pennellii HOM05D001778 ORTHO05D005872 9.4e-13 78.6 185 35.7
PGSC0003DMG400020819 Solanum tuberosum HOM05D001778 ORTHO05D005872 1.2e-12 78.2 163 39.9
Nitab4.5_0007008g0010 Nicotiana tabacum HOM05D001778 ORTHO05D005872 2.1e-12 77.4 134 43.3
CANSAT35G1009 Cannabis sativa HOM05D001778 ORTHO05D005872 4.7e-12 76.3 141 44.0
Nn1g09324 Nelumbo nucifera HOM05D001778 ORTHO05D005872 8.0e-12 75.5 173 37.6
Solyc08g075080.3 Solanum lycopersicum HOM05D001778 ORTHO05D005872 8.0e-12 75.5 185 35.1
arahy.Tifrunner.gnm1.ann1.83ESWU Arachis hypogaea HOM05D000297 ORTHO05D000193 1.4e-11 74.7 68 61.8
Rhsim05G0209500 Rhododendron simsii HOM05D001778 ORTHO05D030540 4.0e-11 73.2 66 62.1
arahy.Tifrunner.gnm1.ann1.SP9TFP Arachis hypogaea HOM05D000297 ORTHO05D000193 6.8e-11 72.4 68 60.3
MSTRG.11845 Avicennia marina HOM05D001778 ORTHO05D005872 1.5e-10 71.2 144 34.7
SGA_v2.0_scaffold89G27359 Striga asiatica HOM05D001778 ORTHO05D005872 2.6e-10 70.5 133 39.8
Gohir.A03G000009 Gossypium hirsutum HOM05D001778 ORTHO05D005872 7.5e-10 68.9 79 59.5
Thecc.03G322000 Theobroma cacao HOM05D001778 ORTHO05D005872 7.5e-10 68.9 101 49.5
Duzib205G1614 Durio zibethinus HOM05D001778 ORTHO05D005872 1.7e-09 67.8 147 40.8
PSO782G3288 Papaver somniferum HOM05D001778 ORTHO05D005872 2.8e-09 67.0 153 35.3
MSTRG.25757 Avicennia marina HOM05D001778 ORTHO05D005872 4.8e-09 66.2 152 38.2
Gohir.A04G148300 Gossypium hirsutum HOM05D001778 ORTHO05D005872 6.3e-09 65.9 79 58.2
Lj5g0009230 Lotus japonicus HOM05D000297 ORTHO05D000193 1.1e-08 65.1 42 73.8
Ciclev10000893m.g Citrus clementina HOM05D001778 ORTHO05D005872 1.4e-08 64.7 88 51.1
PSO063G4066 Papaver somniferum HOM05D001778 ORTHO05D005872 1.4e-08 64.7 162 34.0
Rhsim13G0145000 Rhododendron simsii HOM05D001778 ORTHO05D030540 4.1e-08 63.2 86 45.3
Phvul.007G134000 Phaseolus vulgaris HOM05D000297 ORTHO05D000193 7.0e-08 62.4 36 86.1
RhsimUnG0191300 Rhododendron simsii HOM05D001778 ORTHO05D030540 7.0e-08 62.4 38 84.2
Glyma.10G192000 Glycine max HOM05D000297 ORTHO05D000193 1.2e-07 61.6 36 83.3
VMungo0720G2294 Vigna mungo HOM05D000297 ORTHO05D000193 1.6e-07 61.2 68 51.5
arahy.Tifrunner.gnm1.ann1.67Z0GV Arachis hypogaea HOM05D006523 ORTHO05D008212 2.7e-07 60.5 60 61.7
Lsat_1_v5_gn_6_74361 Lactuca sativa HOM05D001778 ORTHO05D005872 3.5e-07 60.1 121 36.4
Glyma.20G198500 Glycine max HOM05D000297 ORTHO05D000193 4.5e-07 59.7 36 80.6
Lalb_Chr21g0312601 Lupinus albus HOM05D000297 ORTHO05D000193 7.7e-07 58.9 68 47.1
TWI32G0519 Tripterygium wilfordii HOM05D001778 ORTHO05D005872 1.3e-06 58.2 101 39.6
Sc07g0008150 Simmondsia chinensis HOM05D001778 ORTHO05D005872 1.7e-06 57.8 90 44.4
Duzib068G1340 Durio zibethinus HOM05D001778 ORTHO05D005872 6.5e-06 55.8 92 44.6


User provided reference genes

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