Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.5R4F72 Arachis hypogaea HOM05D007186 ORTHO05D008970 5.8e-77 290.8 145 100.0
arahy.Tifrunner.gnm1.ann1.CRYT1U Arachis hypogaea HOM05D007186 ORTHO05D008970 7.8e-42 174.1 113 77.0
arahy.Tifrunner.gnm1.ann1.HI5B62 Arachis hypogaea HOM05D007186 ORTHO05D008970 1.5e-37 159.8 116 72.4
arahy.Tifrunner.gnm1.ann1.I316DY Arachis hypogaea HOM05D007186 ORTHO05D008970 9.6e-32 140.6 102 71.6
arahy.Tifrunner.gnm1.ann1.ZIY68Y Arachis hypogaea HOM05D007186 ORTHO05D008970 4.9e-28 128.3 89 73.0
VMungo0647G1315 Vigna mungo HOM05D007186 ORTHO05D008970 9.6e-24 114.0 116 53.4
Lalb_Chr04g0247191 Lupinus albus HOM05D007186 ORTHO05D008970 3.7e-23 112.1 109 55.0
Glyma.02G307400 Glycine max HOM05D007186 ORTHO05D008970 1.1e-22 110.5 118 52.5
Medtr5g097970 Medicago truncatula HOM05D007186 ORTHO05D008970 1.1e-22 110.5 115 53.0
Phvul.008G287400 Phaseolus vulgaris HOM05D007186 ORTHO05D008970 1.4e-22 110.2 116 52.6
TPR.G15068 Trifolium pratense HOM05D007186 ORTHO05D008970 1.0e-20 104.0 117 47.9
Psat2g003840 Pisum sativum HOM05D007186 ORTHO05D008970 6.5e-20 101.3 110 46.4
LjContig00081g0025535 Lotus japonicus HOM05D000229 ORTHO05D008970 1.0e-17 94.0 90 52.2
FvH4_6g41490 Fragaria vesca HOM05D007186 ORTHO05D008970 2.3e-17 92.8 114 49.1
FAN05G2361 Fragaria x ananassa HOM05D007186 ORTHO05D008970 1.5e-16 90.1 114 46.5
RcHm_v2.0_Chr2g0157151 Rosa chinensis HOM05D007186 ORTHO05D008970 3.3e-16 89.0 114 46.5
Gorai.001G219300 Gossypium raimondii HOM05D007186 ORTHO05D008970 5.7e-16 88.2 110 42.7
Gohir.D07G195800 Gossypium hirsutum HOM05D007186 ORTHO05D008970 9.7e-16 87.4 110 42.7
Potri.014G162700 Populus trichocarpa HOM05D007186 ORTHO05D008970 9.7e-16 87.4 112 44.6
GSVIVG01030422001 Vitis vinifera HOM05D007186 ORTHO05D008970 9.7e-16 87.4 114 42.1
DCAR_032166 Daucus carota HOM05D000693 ORTHO05D008970 1.3e-15 87.0 104 47.1
CANSAT54G2500 Cannabis sativa HOM05D007186 ORTHO05D008970 1.6e-15 86.7 110 46.4
FAN09G3526 Fragaria x ananassa HOM05D007186 ORTHO05D008970 2.2e-15 86.3 114 46.5
Duzib138G0377 Durio zibethinus HOM05D007186 ORTHO05D008970 2.8e-15 85.9 85 49.4
Ciclev10016992m.g Citrus clementina HOM05D007186 ORTHO05D008970 3.7e-15 85.5 112 43.8
HanXRQChr03g0075731 Helianthus annuus HOM05D007186 ORTHO05D008970 1.1e-14 84.0 106 44.3
AL3G42380 Arabidopsis lyrata HOM05D007186 ORTHO05D008970 1.4e-14 83.6 142 39.4
COL.COLO4_06941 Corchorus olitorius HOM05D007186 ORTHO05D008970 1.4e-14 83.6 110 42.7
Prupe.3G204800 Prunus persica HOM05D007186 ORTHO05D008970 1.4e-14 83.6 113 41.6
Glyma.14G005600 Glycine max HOM05D007186 ORTHO05D008970 1.8e-14 83.2 99 47.5
QL08p029418 Quercus lobata HOM05D007186 ORTHO05D008970 2.4e-14 82.8 110 44.5
Actinidia07891 Actinidia chinensis HOM05D007186 ORTHO05D008970 4.1e-14 82.0 87 47.1
MELO3C019365.2 Cucumis melo HOM05D007186 ORTHO05D008970 6.9e-14 81.3 106 43.4
CsaV3_6G009340 Cucumis sativus L. HOM05D007186 ORTHO05D008970 6.9e-14 81.3 104 44.2
CARHR102760 Cardamine hirsuta HOM05D007186 ORTHO05D008970 9.0e-14 80.9 105 41.0
Sabra14G0124100 Salix brachista HOM05D007186 ORTHO05D008970 9.0e-14 80.9 110 41.8
CSS0038956 Camellia sinensis var. sinensis HOM05D007186 ORTHO05D008970 1.2e-13 80.5 106 41.5
ECA240G1183 Erigeron canadensis HOM05D007186 ORTHO05D008970 1.2e-13 80.5 110 42.7
Manes.13G063846 Manihot esculenta HOM05D007186 ORTHO05D008970 1.2e-13 80.5 85 49.4
Hund24136 Selenicereus undatus HOM05D007186 ORTHO05D008970 1.5e-13 80.1 111 42.3
CiPaw.04G194300 Carya illinoinensis HOM05D007186 ORTHO05D008970 2.0e-13 79.7 109 43.1
MD09G1119400 Malus domestica HOM05D007186 ORTHO05D008970 2.0e-13 79.7 111 43.2
PGSC0003DMG400030273 Solanum tuberosum HOM05D007186 ORTHO05D008970 2.0e-13 79.7 117 41.0
BcaB08g34487 Brassica carinata HOM05D007186 ORTHO05D008970 4.5e-13 78.6 106 43.4
Eucgr.K00670 Eucalyptus grandis HOM05D007186 ORTHO05D008970 4.5e-13 78.6 110 40.0
Hma1.2p1_0133F.1_g061060 Hydrangea macrophylla HOM05D007186 ORTHO05D008970 5.9e-13 78.2 85 45.9
TAR624G0839 Trochodendron aralioides HOM05D007186 ORTHO05D008970 5.9e-13 78.2 116 39.7
HPP92_022801 Vanilla planifolia HOM05D007186 ORTHO05D008970 5.9e-13 78.2 119 41.2
Dinv07835 Davidia involucrata HOM05D007186 ORTHO05D008970 7.7e-13 77.8 110 40.0
Rhsim06G0171800 Rhododendron simsii HOM05D007186 ORTHO05D008970 1.0e-12 77.4 115 39.1
SEGI_21441 Sequoiadendron giganteum HOM05D007186 ORTHO05D008970 1.0e-12 77.4 114 40.4
BcaC01g03187 Brassica carinata HOM05D007186 ORTHO05D008970 1.3e-12 77.0 116 39.7
BcaC01g03189 Brassica carinata HOM05D007186 ORTHO05D008970 1.3e-12 77.0 116 39.7
MBI19_g06151_MAGBIO Magnolia biondii HOM05D007186 ORTHO05D008970 1.3e-12 77.0 91 42.9
PGR142G1014 Punica granatum HOM05D007186 ORTHO05D008970 1.3e-12 77.0 107 39.3
PSO675G5362 Papaver somniferum HOM05D007186 ORTHO05D008970 1.7e-12 76.6 106 40.6
Atru.chr6.3329 Acer truncatum HOM05D007186 ORTHO05D008970 2.2e-12 76.3 112 41.1
C03p55060 Brassica napus HOM05D007186 ORTHO05D008970 2.2e-12 76.3 106 39.6
BolC3t17781H Brassica oleracea HOM05D007186 ORTHO05D008970 2.2e-12 76.3 106 39.6
Carub.0003s2639 Capsella rubella HOM05D007186 ORTHO05D008970 2.2e-12 76.3 110 40.9
Nitab4.5_0011275g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 2.2e-12 76.3 107 41.1
Oeu040479.1 Olea europaea HOM05D007186 ORTHO05D008970 2.2e-12 76.3 106 40.6
Sp3g23400 Schrenkiella parvula HOM05D007186 ORTHO05D008970 2.2e-12 76.3 110 40.0
Solyc05g041430.3 Solanum lycopersicum HOM05D007186 ORTHO05D008970 5.0e-12 75.1 116 39.7
Sopen05g025420 Solanum pennellii HOM05D007186 ORTHO05D008970 5.0e-12 75.1 116 39.7
THA.LOC104808856 Tarenaya hassleriana HOM05D007186 ORTHO05D008970 5.0e-12 75.1 106 41.5
AUR62015089 Chenopodium quinoa HOM05D007186 ORTHO05D008970 6.5e-12 74.7 111 37.8
AUR62044229 Chenopodium quinoa HOM05D007186 ORTHO05D008970 6.5e-12 74.7 111 37.8
AUR62044345 Chenopodium quinoa HOM05D007186 ORTHO05D008970 6.5e-12 74.7 111 37.8
Nitab4.5_0002877g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 6.5e-12 74.7 115 38.3
Lsat_1_v5_gn_9_105540 Lactuca sativa HOM05D007186 ORTHO05D008970 8.5e-12 74.3 106 38.7
Peaxi162Scf00147g01818 Petunia axillaris HOM05D007186 ORTHO05D008970 8.5e-12 74.3 107 41.1
AUR62017547 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.1e-11 73.9 107 39.3
Thhalv10002690m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 1.4e-11 73.6 111 38.7
Aqoxy1G02832 Aquilegia oxysepala HOM05D007186 ORTHO05D008970 2.5e-11 72.8 106 39.6
Haze_12721 Corylus avellana HOM05D007186 ORTHO05D008970 2.5e-11 72.8 135 37.0
unitig_578.g16640 Utricularia gibba HOM05D007186 ORTHO05D008970 2.7e-10 69.3 132 37.9
A03p44430 Brassica napus HOM05D007186 ORTHO05D008970 3.6e-10 68.9 86 41.9
BraA03t13576Z Brassica rapa HOM05D007186 ORTHO05D008970 3.6e-10 68.9 86 41.9
Sc20g0003870 Simmondsia chinensis HOM05D007186 ORTHO05D008970 3.6e-10 68.9 92 41.3
ATR0712G003 Amborella trichopoda HOM05D007186 ORTHO05D008970 4.6e-10 68.6 108 37.0
BcaC01g03185 Brassica carinata HOM05D007186 ORTHO05D008970 4.6e-10 68.6 83 41.0
C03p55120 Brassica napus HOM05D007186 ORTHO05D008970 4.6e-10 68.6 86 40.7
BolC3t17784H Brassica oleracea HOM05D007186 ORTHO05D008970 4.6e-10 68.6 83 41.0
TWI36G0211 Tripterygium wilfordii HOM05D007186 ORTHO05D008970 1.0e-09 67.4 114 36.8
Zm00001eb245650 Zea mays HOM05D007186 ORTHO05D008970 1.0e-09 67.4 87 46.0
Sed0024069 Sechium edule HOM05D007186 ORTHO05D008970 1.4e-09 67.0 89 42.7
ClCG02G009490 Citrullus lanatus HOM05D007186 ORTHO05D008970 3.0e-09 65.9 158 30.4
AUR62044292 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.0e-08 63.2 100 36.0
Pp3c15_5880 Physcomitrium patens HOM05D007186 ORTHO05D008970 7.4e-08 61.2 113 34.5
Lj8A132T57 Lonicera japonica HOM05D007186 ORTHO05D008970 2.8e-07 59.3 103 34.0
SalBow7G1582 Salvia bowleyana HOM05D000037 ORTHO05D000150 2.8e-07 59.3 78 41.0
Migut.M00010 Erythranthe guttata HOM05D007186 ORTHO05D008970 4.8e-07 58.5 88 34.1
Aa31sc53G20 Aethionema arabicum HOM05D007186 ORTHO05D006113 8.2e-07 57.8 129 32.6
Eucgr.K00669 Eucalyptus grandis HOM05D007186 ORTHO05D008970 1.8e-06 56.6 60 46.7
Os02g0588600 Oryza sativa ssp. japonica HOM05D007186 ORTHO05D008970 5.3e-06 55.1 93 37.6


User provided reference genes

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