Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.5N7P5J Arachis hypogaea HOM05D005034 ORTHO05D006234 2.4e-54 215.3 111 100.0
arahy.Tifrunner.gnm1.ann1.ZFUC3L Arachis hypogaea HOM05D005034 ORTHO05D006234 1.1e-19 100.1 93 62.4
arahy.Tifrunner.gnm1.ann1.4P2RM7 Arachis hypogaea HOM05D005034 ORTHO05D006234 9.3e-19 97.1 57 89.5
arahy.Tifrunner.gnm1.ann1.RW0ZF5 Arachis hypogaea HOM05D005034 ORTHO05D006234 3.5e-18 95.1 93 60.2
LjContig00318g0021446 Lotus japonicus HOM05D005034 ORTHO05D006234 6.3e-15 84.3 93 55.9
LjContig00319g0026028 Lotus japonicus HOM05D005034 ORTHO05D006234 6.3e-15 84.3 93 55.9
Medtr4g006130 Medicago truncatula HOM05D005034 ORTHO05D006234 1.4e-14 83.2 56 80.4
Gohir.1Z049831 Gossypium hirsutum HOM05D005034 ORTHO05D006234 6.9e-14 80.9 59 71.2
Gohir.A02G134200 Gossypium hirsutum HOM05D005034 ORTHO05D006234 6.9e-14 80.9 59 71.2
Gohir.A10G117233 Gossypium hirsutum HOM05D005034 ORTHO05D006234 6.9e-14 80.9 59 71.2
PGR111G0056 Punica granatum HOM05D005034 ORTHO05D006234 6.9e-14 80.9 59 71.2
PSO548G0041 Papaver somniferum HOM05D005034 ORTHO05D006234 9.0e-14 80.5 59 71.2
Lalb_Chr07g0191731 Lupinus albus HOM05D005034 ORTHO05D006234 1.2e-13 80.1 56 76.8
Gohir.D03G077700 Gossypium hirsutum HOM05D005034 ORTHO05D006234 3.4e-13 78.6 59 69.5
MBI10_g47592_MAGBIO Magnolia biondii HOM05D005034 ORTHO05D006234 4.5e-13 78.2 55 76.4
Nn064s42213 Nelumbo nucifera HOM05D005034 ORTHO05D006234 1.0e-12 77.0 54 72.2
Nn212s45210 Nelumbo nucifera HOM05D005034 ORTHO05D006234 1.0e-12 77.0 54 72.2
Potri.001G342966 Populus trichocarpa HOM05D005034 ORTHO05D006234 6.5e-12 74.3 93 51.6
Sed0006489 Sechium edule HOM05D005034 ORTHO05D006234 8.5e-12 73.9 58 63.8
CAN.G1045.13 Capsicum annuum HOM05D005034 ORTHO05D006234 1.4e-11 73.2 49 77.6
CAN.G134.8 Capsicum annuum HOM05D005034 ORTHO05D006234 1.4e-11 73.2 49 77.6
CAN.G1526.4 Capsicum annuum HOM05D005034 ORTHO05D006234 1.4e-11 73.2 49 77.6
CAN.G278.5 Capsicum annuum HOM05D005034 ORTHO05D006234 1.4e-11 73.2 49 77.6
DCAR_032535 Daucus carota HOM05D005034 ORTHO05D006234 1.4e-11 73.2 49 77.6
Nitab4.5_0001130g0160 Nicotiana tabacum HOM05D005034 ORTHO05D006234 1.4e-11 73.2 49 77.6
Sed0013321 Sechium edule HOM05D005034 ORTHO05D006234 1.4e-11 73.2 54 66.7
Solyc00g500085.1 Solanum lycopersicum HOM05D005034 ORTHO05D006234 1.4e-11 73.2 49 77.6
CSS0025903 Camellia sinensis var. sinensis HOM05D005034 ORTHO05D006234 1.9e-11 72.8 83 54.2
Lalb_Chr23g0274781 Lupinus albus HOM05D005034 ORTHO05D006234 2.5e-11 72.4 57 66.7
Peaxi162Scf01164g00036 Petunia axillaris HOM05D005034 ORTHO05D006234 3.2e-11 72.0 50 74.0
Lj2P1238T83 Lonicera japonica HOM05D005034 ORTHO05D006234 7.2e-11 70.9 49 75.5
Lj9P89T19 Lonicera japonica HOM05D005034 ORTHO05D006234 7.2e-11 70.9 49 75.5
ATCG01040 Arabidopsis thaliana HOM05D005034 ORTHO05D006234 9.4e-11 70.5 52 73.1
C07p33420 Brassica napus HOM05D005034 ORTHO05D006234 1.2e-10 70.1 52 73.1
C09p40380 Brassica napus HOM05D005034 ORTHO05D006234 1.2e-10 70.1 52 73.1
BolSC29t60503H Brassica oleracea HOM05D005034 ORTHO05D006234 1.2e-10 70.1 52 73.1
BolSC29t60543H Brassica oleracea HOM05D005034 ORTHO05D006234 1.2e-10 70.1 52 73.1
BolSC35t60695H Brassica oleracea HOM05D005034 ORTHO05D006234 1.2e-10 70.1 52 73.1
BolSC35t60701H Brassica oleracea HOM05D005034 ORTHO05D006234 1.2e-10 70.1 52 73.1
BolSC37t60790H Brassica oleracea HOM05D005034 ORTHO05D006234 1.2e-10 70.1 52 73.1
BolSC46t60961H Brassica oleracea HOM05D005034 ORTHO05D006234 1.2e-10 70.1 52 73.1
BolSC47t61067H Brassica oleracea HOM05D005034 ORTHO05D006234 1.2e-10 70.1 52 73.1
BolSC49t61140H Brassica oleracea HOM05D005034 ORTHO05D006234 1.2e-10 70.1 52 73.1
BraSC103t45426Z Brassica rapa HOM05D005034 ORTHO05D006234 1.2e-10 70.1 52 73.1
BraSC138t45537Z Brassica rapa HOM05D005034 ORTHO05D006234 1.2e-10 70.1 52 73.1
BraSC143t45663Z Brassica rapa HOM05D005034 ORTHO05D006234 1.2e-10 70.1 52 73.1
BraSC179t45777Z Brassica rapa HOM05D005034 ORTHO05D006234 1.2e-10 70.1 52 73.1
BraSC25t45907Z Brassica rapa HOM05D005034 ORTHO05D006234 1.2e-10 70.1 52 73.1
BraSC59t46548Z Brassica rapa HOM05D005034 ORTHO05D006234 1.2e-10 70.1 52 73.1
Sed0020615 Sechium edule HOM05D005034 ORTHO05D006234 1.6e-10 69.7 92 45.7
CAN.G413.9 Capsicum annuum HOM05D005034 ORTHO05D006234 2.1e-10 69.3 49 73.5
BolC9t56928H Brassica oleracea HOM05D005034 ORTHO05D006234 3.6e-10 68.6 52 71.2
BolSC45t60912H Brassica oleracea HOM05D005034 ORTHO05D006234 4.6e-10 68.2 48 77.1
HanXRQChr00c0690g0576751 Helianthus annuus HOM05D005034 ORTHO05D006234 4.6e-10 68.2 52 67.3
HanXRQChr02g0059701 Helianthus annuus HOM05D005034 ORTHO05D006234 4.6e-10 68.2 52 67.3
HanXRQChr05g0152421 Helianthus annuus HOM05D005034 ORTHO05D006234 4.6e-10 68.2 52 67.3
HanXRQChr06g0182991 Helianthus annuus HOM05D005034 ORTHO05D006234 4.6e-10 68.2 52 67.3
HanXRQChr09g0251521 Helianthus annuus HOM05D005034 ORTHO05D006234 4.6e-10 68.2 52 67.3
HanXRQChr11g0323731 Helianthus annuus HOM05D005034 ORTHO05D006234 4.6e-10 68.2 52 67.3
HanXRQChr13g0413491 Helianthus annuus HOM05D005034 ORTHO05D006234 4.6e-10 68.2 52 67.3
HanXRQCPg0580361 Helianthus annuus HOM05D005034 ORTHO05D006234 4.6e-10 68.2 52 67.3
Eucgr.K01772 Eucalyptus grandis HOM05D005034 ORTHO05D006234 1.4e-09 66.6 42 81.0
Nitab4.5_0007979g0110 Nicotiana tabacum HOM05D005034 ORTHO05D006234 1.4e-09 66.6 51 72.5
HanXRQChr01g0020091 Helianthus annuus HOM05D005034 ORTHO05D006234 2.3e-09 65.9 92 47.8
Lalb_Chr18g0049451 Lupinus albus HOM05D005034 ORTHO05D006234 3.9e-09 65.1 77 51.9
SalBow1G5942 Salvia bowleyana HOM05D005034 ORTHO05D006234 3.9e-09 65.1 81 50.6
Nitab4.5_0001446g0070 Nicotiana tabacum HOM05D005034 ORTHO05D006234 5.1e-09 64.7 56 62.5
CAN.G8.23 Capsicum annuum HOM05D005034 ORTHO05D006234 1.1e-08 63.5 49 69.4
MBI10_g47591_MAGBIO Magnolia biondii HOM05D005034 ORTHO05D006234 1.3e-07 60.1 61 55.7
arahy.Tifrunner.gnm1.ann1.A5A200 Arachis hypogaea HOM05D005034 ORTHO05D006234 1.7e-07 59.7 37 86.5
CARHR178440 Cardamine hirsuta HOM05D005034 ORTHO05D006234 3.7e-07 58.5 43 74.4
Pp3c2_30980 Physcomitrium patens HOM05D005034 ORTHO05D006234 6.3e-07 57.8 77 48.1
Oeu010692.1 Olea europaea HOM05D005034 ORTHO05D006234 6.9e-06 54.3 97 43.3


User provided reference genes

Program Settings