Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.5M5P73 Arachis hypogaea HOM05D004001 ORTHO05D004559 1.9e-165 585.9 314 100.0
arahy.Tifrunner.gnm1.ann1.0Y1PWL Arachis hypogaea HOM05D004001 ORTHO05D004559 8.8e-131 470.7 420 68.1
arahy.Tifrunner.gnm1.ann1.JKPH3R Arachis hypogaea HOM05D004001 ORTHO05D004559 7.2e-125 451.1 413 67.3
arahy.Tifrunner.gnm1.ann1.CI1NNE Arachis hypogaea HOM05D004001 ORTHO05D004559 4.2e-117 425.2 419 63.5
arahy.Tifrunner.gnm1.ann1.H5PXMS Arachis hypogaea HOM05D004001 ORTHO05D004559 4.7e-116 421.8 413 63.4
arahy.Tifrunner.gnm1.ann1.RB3Z54 Arachis hypogaea HOM05D004001 ORTHO05D004559 1.2e-114 417.2 436 60.6
arahy.Tifrunner.gnm1.ann1.2UV9R4 Arachis hypogaea HOM05D004001 ORTHO05D004559 1.3e-113 413.7 420 61.7
Dinv32391 Davidia involucrata HOM05D004001 ORTHO05D004559 1.3e-97 360.5 426 52.8
Actinidia12272 Actinidia chinensis HOM05D004001 ORTHO05D004559 2.1e-92 343.2 407 52.6
arahy.Tifrunner.gnm1.ann1.9J1L2I Arachis hypogaea HOM05D004001 ORTHO05D004559 5.2e-91 338.6 420 51.9
arahy.Tifrunner.gnm1.ann1.EYC1DY Arachis hypogaea HOM05D004001 ORTHO05D004559 5.2e-91 338.6 420 51.9
Lalb_Chr07g0189651 Lupinus albus HOM05D004001 ORTHO05D004559 1.5e-90 337.0 420 51.4
Actinidia31422 Actinidia chinensis HOM05D004001 ORTHO05D004559 2.2e-89 333.2 396 52.3
Glyma.18G221900 Glycine max HOM05D004001 ORTHO05D004559 1.4e-88 330.5 420 51.4
Lalb_Chr12g0208391 Lupinus albus HOM05D004001 ORTHO05D004559 4.1e-88 328.9 420 51.0
Lalb_Chr12g0208441 Lupinus albus HOM05D004001 ORTHO05D004559 4.1e-88 328.9 420 51.0
CANSAT56G0321 Cannabis sativa HOM05D004001 ORTHO05D004559 7.0e-88 328.2 408 50.0
CiPaw.01G260600 Carya illinoinensis HOM05D004001 ORTHO05D004559 1.2e-87 327.4 425 49.2
TAR636G3381 Trochodendron aralioides HOM05D004001 ORTHO05D004559 1.6e-87 327.0 414 50.0
FAN10G1409 Fragaria x ananassa HOM05D004001 ORTHO05D004559 3.5e-87 325.9 422 48.1
GSVIVG01027630001 Vitis vinifera HOM05D004001 ORTHO05D004559 6.0e-87 325.1 424 49.5
vmacro13388 Vaccinium macrocarpon HOM05D004001 ORTHO05D004559 7.8e-87 324.7 373 53.6
FvH4_7g12090 Fragaria vesca HOM05D004001 ORTHO05D004559 1.0e-86 324.3 422 47.9
FAN06G4715 Fragaria x ananassa HOM05D004001 ORTHO05D004559 1.0e-86 324.3 422 47.9
TAR629G2254 Trochodendron aralioides HOM05D004001 ORTHO05D004559 3.9e-86 322.4 408 50.5
FAN06G2206 Fragaria x ananassa HOM05D004001 ORTHO05D004559 5.0e-86 322.0 422 47.6
Glyma.09G268000 Glycine max HOM05D004001 ORTHO05D004559 6.6e-86 321.6 424 49.8
Rhsim07G0025900 Rhododendron simsii HOM05D004001 ORTHO05D004559 1.1e-85 320.9 449 47.4
FAN10G1690 Fragaria x ananassa HOM05D004001 ORTHO05D004559 2.5e-85 319.7 422 47.6
Rhsim07G0026000 Rhododendron simsii HOM05D004001 ORTHO05D004559 7.3e-85 318.2 473 45.2
Haze_16831 Corylus avellana HOM05D004001 ORTHO05D004559 1.2e-84 317.4 412 49.5
Solyc01g091500.3 Solanum lycopersicum HOM05D004001 ORTHO05D004559 1.2e-84 317.4 396 51.8
Sopen01g037250 Solanum pennellii HOM05D004001 ORTHO05D004559 1.2e-84 317.4 396 51.8
Gorai.007G092200 Gossypium raimondii HOM05D004001 ORTHO05D004559 1.6e-84 317.0 430 49.3
Potri.014G071400 Populus trichocarpa HOM05D004001 ORTHO05D004559 3.1e-83 312.8 400 49.8
CsaV3_3G009550 Cucumis sativus L. HOM05D004001 ORTHO05D004559 1.5e-82 310.5 420 48.1
Medtr7g075140 Medicago truncatula HOM05D004001 ORTHO05D004559 5.8e-82 308.5 420 50.0
Manes.05G044000 Manihot esculenta HOM05D004001 ORTHO05D004559 7.5e-82 308.1 397 49.9
MSTRG.20759 Avicennia marina HOM05D004001 ORTHO05D004559 2.9e-81 306.2 397 49.6
QL08p051978 Quercus lobata HOM05D004001 ORTHO05D004559 3.7e-81 305.8 425 47.5
Lj1g0027935 Lotus japonicus HOM05D004001 ORTHO05D004559 4.9e-81 305.4 420 47.6
Duzib138G1007 Durio zibethinus HOM05D004001 ORTHO05D004559 1.1e-80 304.3 410 49.8
Atru.chr5.325 Acer truncatum HOM05D004001 ORTHO05D004559 7.1e-80 301.6 414 47.3
Ca_07831_v3 Cicer arietinum L. HOM05D004001 ORTHO05D004559 1.6e-79 300.4 371 52.6
PGSC0003DMG400012752 Solanum tuberosum HOM05D004001 ORTHO05D004559 1.6e-79 300.4 399 49.1
Psat3g115320 Pisum sativum HOM05D004001 ORTHO05D004559 2.1e-79 300.1 367 51.2
Thecc.01G374400 Theobroma cacao HOM05D004001 ORTHO05D004559 2.7e-79 299.7 406 47.8
Nitab4.5_0010473g0020 Nicotiana tabacum HOM05D004001 ORTHO05D004559 7.8e-79 298.1 396 49.5
Phvul.008G075200 Phaseolus vulgaris HOM05D004001 ORTHO05D004559 1.0e-78 297.7 420 48.3
Sed0014964 Sechium edule HOM05D004001 ORTHO05D004559 5.1e-78 295.4 352 51.4
RcHm_v2.0_Chr1g0350831 Rosa chinensis HOM05D004001 ORTHO05D004559 6.6e-78 295.0 422 45.5
Sabra14G0050700 Salix brachista HOM05D004001 ORTHO05D004559 6.6e-78 295.0 399 47.6
Nitab4.5_0004320g0020 Nicotiana tabacum HOM05D004001 ORTHO05D004559 7.3e-77 291.6 409 47.7
Prupe.2G147400 Prunus persica HOM05D004001 ORTHO05D004559 2.8e-76 289.7 419 46.3
Cc02_g36540 Coffea canephora HOM05D004001 ORTHO05D004559 6.2e-76 288.5 396 46.7
FAN03G0266 Fragaria x ananassa HOM05D004001 ORTHO05D004559 4.0e-75 285.8 411 44.5
CAN.G170.4 Capsicum annuum HOM05D004001 ORTHO05D004559 6.8e-75 285.0 412 46.4
Cfa001702 Carpinus fangiana HOM05D004001 ORTHO05D004559 6.8e-75 285.0 412 47.3
SalBow5G4135 Salvia bowleyana HOM05D004001 ORTHO05D004559 1.2e-74 284.3 396 46.0
Sc26g0001190 Simmondsia chinensis HOM05D004001 ORTHO05D004559 2.0e-74 283.5 422 45.5
Eucgr.E01409 Eucalyptus grandis HOM05D004001 ORTHO05D004559 2.9e-73 279.6 409 45.7
Gohir.D11G086300 Gossypium hirsutum HOM05D004001 ORTHO05D004559 6.4e-73 278.5 430 45.8
MELO3C006177.2 Cucumis melo HOM05D004001 ORTHO05D004559 9.2e-72 274.6 420 43.1
TPR.G26922 Trifolium pratense HOM05D004001 ORTHO05D004559 4.6e-71 272.3 336 50.6
TWI14G1161 Tripterygium wilfordii HOM05D004001 ORTHO05D004559 7.8e-71 271.6 378 46.6
Gorai.008G114700 Gossypium raimondii HOM05D004001 ORTHO05D004559 2.3e-70 270.0 410 45.9
Ciclev10018784m.g Citrus clementina HOM05D004001 ORTHO05D004559 3.0e-70 269.6 407 45.2
Lj7C526G13 Lonicera japonica HOM05D004001 ORTHO05D004559 3.0e-70 269.6 406 45.6
Nn4g26437 Nelumbo nucifera HOM05D004001 ORTHO05D004559 1.1e-69 267.7 426 43.0
MD02G1201400 Malus domestica HOM05D004001 ORTHO05D004559 1.9e-69 266.9 398 44.5
PSO478G3708 Papaver somniferum HOM05D004001 ORTHO05D004559 1.9e-69 266.9 411 42.6
EL10Ac1g00911 Beta vulgaris HOM05D004001 ORTHO05D004559 4.3e-69 265.8 422 43.1
COL.COLO4_12572 Corchorus olitorius HOM05D004001 ORTHO05D004559 6.2e-68 261.9 421 43.0
PSO782G3046 Papaver somniferum HOM05D004001 ORTHO05D004559 6.2e-68 261.9 410 41.5
Aqoxy7G00586 Aquilegia oxysepala HOM05D004001 ORTHO05D004559 8.1e-68 261.5 409 42.1
Migut.B01647 Erythranthe guttata HOM05D004001 ORTHO05D004559 8.1e-68 261.5 390 44.1
Lj9C572T3 Lonicera japonica HOM05D004001 ORTHO05D004559 1.8e-67 260.4 409 43.3
AUR62013619 Chenopodium quinoa HOM05D004001 ORTHO05D004559 2.4e-67 260.0 404 43.6
Peaxi162Scf00021g01316 Petunia axillaris HOM05D004001 ORTHO05D004559 3.1e-67 259.6 412 43.7
CDE04G0282 Ceratophyllum demersum HOM05D004001 ORTHO05D004559 1.5e-66 257.3 408 42.9
unitig_8.g3817 Utricularia gibba HOM05D004001 ORTHO05D004559 3.4e-66 256.1 408 42.4
HanXRQChr03g0093811 Helianthus annuus HOM05D004001 ORTHO05D004559 5.8e-66 255.4 409 41.8
Hund17008 Selenicereus undatus HOM05D004001 ORTHO05D004559 1.3e-65 254.2 404 42.3
Oeu037907.1 Olea europaea HOM05D004001 ORTHO05D004559 2.2e-65 253.4 417 44.1
SGA_v2.0_scaffold153G37027 Striga asiatica HOM05D004001 ORTHO05D001724 4.9e-65 252.3 396 43.7
CARHR140650 Cardamine hirsuta HOM05D004001 ORTHO05D004559 8.4e-65 251.5 420 41.7
ClCG05G002120 Citrullus lanatus HOM05D004001 ORTHO05D004559 8.4e-65 251.5 490 39.0
BcaB02g08998 Brassica carinata HOM05D004001 ORTHO05D004559 9.3e-64 248.1 409 42.1
SGA_v2.0_scaffold95G28893 Striga asiatica HOM05D004001 ORTHO05D004559 2.1e-63 246.9 397 43.1
Gohir.A12G102200 Gossypium hirsutum HOM05D004001 ORTHO05D004559 7.8e-63 245.0 389 45.5
Sp4g27490 Schrenkiella parvula HOM05D004001 ORTHO05D004559 1.7e-62 243.8 409 42.3
AL4G44630 Arabidopsis lyrata HOM05D004001 ORTHO05D004559 3.9e-62 242.7 418 41.9
Gohir.D12G105400 Gossypium hirsutum HOM05D004001 ORTHO05D004559 2.5e-61 240.0 409 43.0
MBI11_g23939_MAGBIO Magnolia biondii HOM05D004001 ORTHO05D004559 5.6e-61 238.8 352 45.5
BolC4t22266H Brassica oleracea HOM05D004001 ORTHO05D004559 1.6e-60 237.3 424 41.5
Thhalv10001303m.g Eutrema salsugineum HOM05D004001 ORTHO05D004559 2.1e-60 236.9 422 40.8
AUR62004229 Chenopodium quinoa HOM05D004001 ORTHO05D004559 3.6e-60 236.1 440 38.9
BraA05t19519Z Brassica rapa HOM05D004001 ORTHO05D004559 1.8e-59 233.8 424 40.8
AT2G45460 Arabidopsis thaliana HOM05D004001 ORTHO05D004559 9.0e-59 231.5 420 40.0
Os03g0127600 Oryza sativa ssp. japonica HOM05D004001 ORTHO05D004559 1.3e-57 227.6 356 42.1
Zm00001eb403560 Zea mays HOM05D004001 ORTHO05D004559 1.3e-57 227.6 409 38.4
C04p06430 Brassica napus HOM05D004001 ORTHO05D004559 2.9e-57 226.5 409 40.6
BcaC02g12205 Brassica carinata HOM05D004001 ORTHO05D004559 3.8e-57 226.1 409 40.6
A05p05490 Brassica napus HOM05D004001 ORTHO05D004559 2.4e-56 223.4 409 40.3
CSS0038978 Camellia sinensis var. sinensis HOM05D004001 ORTHO05D004559 2.7e-55 219.9 320 44.4
PGR042G2753 Punica granatum HOM05D004001 ORTHO05D004559 2.7e-55 219.9 353 40.8
Carub.0004s2807 Capsella rubella HOM05D004001 ORTHO05D004559 6.0e-55 218.8 423 39.0
ECA240G2591 Erigeron canadensis HOM05D004001 ORTHO05D004559 2.3e-54 216.9 409 39.6
Lsat_1_v5_gn_3_133301 Lactuca sativa HOM05D004001 ORTHO05D004559 6.6e-54 215.3 405 39.8
Aa31LG1G26960 Aethionema arabicum HOM05D004001 ORTHO05D004559 1.5e-53 214.2 431 37.6
HPP92_018394 Vanilla planifolia HOM05D004001 ORTHO05D004559 1.9e-53 213.8 354 41.2
SHI13515 Sapria himalayana HOM05D004001 ORTHO05D004559 1.6e-52 210.7 349 39.8
ATR0757G164 Amborella trichopoda HOM05D004001 ORTHO05D004559 2.1e-52 210.3 400 37.0
arahy.Tifrunner.gnm1.ann1.K6PBMX Arachis hypogaea HOM05D004001 ORTHO05D004559 1.4e-51 207.6 154 77.9
Zm00001eb002020 Zea mays HOM05D004001 ORTHO05D004559 1.8e-46 190.7 408 35.5
Ah.16g103740 Amaranthus hybridus HOM05D004001 ORTHO05D004559 2.4e-43 180.3 379 36.7
Gohir.A11G081700 Gossypium hirsutum HOM05D004001 ORTHO05D004559 3.4e-42 176.4 361 38.5
arahy.Tifrunner.gnm1.ann1.DK59KL Arachis hypogaea HOM05D004001 ORTHO05D004559 2.2e-41 173.7 136 75.0
SEGI_05063 Sequoiadendron giganteum HOM05D004001 ORTHO05D004559 1.8e-38 164.1 419 31.5
unitig_31.g34038 Utricularia gibba HOM05D004001 ORTHO05D004559 4.8e-36 156.0 299 44.1
arahy.Tifrunner.gnm1.ann1.LXQN6Z Arachis hypogaea HOM05D004001 ORTHO05D004559 2.2e-33 147.1 267 42.3
Oeu005774.1 Olea europaea HOM05D004001 ORTHO05D004559 5.7e-29 132.5 214 40.7
AagrBONN_evm.TU.Sc2ySwM_362.1643 Anthoceros agrestis HOM05D004001 ORTHO05D004559 1.3e-28 131.3 378 31.7
arahy.Tifrunner.gnm1.ann1.7YWS89 Arachis hypogaea HOM05D004001 ORTHO05D004559 2.2e-25 120.6 267 37.8
DCAR_006877 Daucus carota HOM05D004001 ORTHO05D004559 5.1e-22 109.4 310 31.6
DCAR_006876 Daucus carota HOM05D004001 ORTHO05D004559 8.8e-22 108.6 71 76.1
arahy.Tifrunner.gnm1.ann1.FJEF2G Arachis hypogaea HOM05D004001 ORTHO05D004559 2.6e-21 107.1 106 63.2
arahy.Tifrunner.gnm1.ann1.Q8AXKZ Arachis hypogaea HOM05D005562 ORTHO05D007785 6.3e-20 102.4 172 47.1
VMungo1383G1498 Vigna mungo HOM05D004001 ORTHO05D004559 1.4e-19 101.3 58 86.2
SEGI_21780 Sequoiadendron giganteum HOM05D004001 ORTHO05D004559 1.7e-17 94.4 230 36.5
SalBow3G1117 Salvia bowleyana HOM05D004001 ORTHO05D004559 1.6e-15 87.8 104 46.2
Mapoly0048s0074 Marchantia polymorpha HOM05D004001 ORTHO05D004559 2.7e-15 87.0 127 37.8
arahy.Tifrunner.gnm1.ann1.63QVJR Arachis hypogaea HOM05D004001 ORTHO05D004559 1.0e-14 85.1 170 39.4
Mapoly0005s0201 Marchantia polymorpha HOM05D004001 ORTHO05D004559 2.3e-14 84.0 401 25.7
arahy.Tifrunner.gnm1.ann1.2V3ERI Arachis hypogaea HOM05D004001 ORTHO05D004559 3.0e-14 83.6 170 38.8
EL10Ac2g04735 Beta vulgaris HOM05D002948 ORTHO05D003577 3.0e-14 83.6 58 69.0
Actinidia33460 Actinidia chinensis HOM05D004001 ORTHO05D004559 5.2e-14 82.8 98 51.0
Pp3c5_28010 Physcomitrium patens HOM05D004001 ORTHO05D004559 5.7e-13 79.3 206 33.5
vmacro22718 Vaccinium macrocarpon HOM05D004001 ORTHO05D004559 1.3e-12 78.2 60 71.7
Dinv00152 Davidia involucrata HOM05D026811 ORTHO05D004559 1.6e-10 71.2 56 62.5
Dinv00153 Davidia involucrata HOM05D004001 ORTHO05D004559 1.6e-10 71.2 56 62.5
Rhsim07G0026800 Rhododendron simsii HOM05D004001 ORTHO05D004559 1.6e-10 71.2 65 67.7
Cpa.g.sc18.133 Carica papaya HOM05D004001 ORTHO05D004559 1.7e-09 67.8 228 31.1
Dinv00151 Davidia involucrata HOM05D026811 ORTHO05D004559 1.1e-08 65.1 100 41.0
arahy.Tifrunner.gnm1.ann1.GD98VG Arachis hypogaea HOM05D004001 ORTHO05D004559 9.4e-08 62.0 59 62.7
arahy.Tifrunner.gnm1.ann1.YQ72RL Arachis hypogaea HOM05D004001 ORTHO05D004559 2.1e-07 60.8 180 32.2
Psat6g122920 Pisum sativum HOM05D004001 ORTHO05D004559 4.7e-07 59.7 54 59.3
arahy.Tifrunner.gnm1.ann1.8X1DD2 Arachis hypogaea HOM05D004001 ORTHO05D004559 2.3e-06 57.4 31 87.1
arahy.Tifrunner.gnm1.ann1.Y88425 Arachis hypogaea HOM05D004001 ORTHO05D004559 2.3e-06 57.4 122 37.7


User provided reference genes

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