Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.5KK3LT Arachis hypogaea HOM05D001886 ORTHO05D004007 9.7e-34 146.4 80 100.0
arahy.Tifrunner.gnm1.ann1.F78JUJ Arachis hypogaea HOM05D001886 ORTHO05D004007 1.3e-33 146.0 79 100.0
Lalb_Chr03g0026781 Lupinus albus HOM05D001886 ORTHO05D004007 1.8e-16 89.0 86 61.6
Glyma.13G334000 Glycine max HOM05D001886 ORTHO05D004007 5.3e-16 87.4 83 65.1
Lj3g0013632 Lotus japonicus HOM05D001886 ORTHO05D004007 1.2e-15 86.3 88 59.1
Medtr2g096630 Medicago truncatula HOM05D001886 ORTHO05D004007 5.0e-14 80.9 82 58.5
TPR.G34284 Trifolium pratense HOM05D001886 ORTHO05D004007 3.2e-13 78.2 82 57.3
VMungo1080G1431 Vigna mungo HOM05D001886 ORTHO05D004007 7.2e-13 77.0 90 52.2
Phvul.L003643 Phaseolus vulgaris HOM05D001886 ORTHO05D004007 3.6e-12 74.7 88 53.4
Gohir.A07G096100 Gossypium hirsutum HOM05D001886 ORTHO05D004007 1.4e-08 62.8 85 49.4
Gohir.D07G100500 Gossypium hirsutum HOM05D001886 ORTHO05D004007 1.4e-08 62.8 85 49.4
Gorai.001G108400 Gossypium raimondii HOM05D001886 ORTHO05D004007 1.4e-08 62.8 85 49.4
Ciclev10030058m.g Citrus clementina HOM05D001886 ORTHO05D004007 4.1e-08 61.2 85 52.9
Thecc.09G325900 Theobroma cacao HOM05D001886 ORTHO05D004007 2.7e-07 58.5 85 49.4
Duzib150G0204 Durio zibethinus HOM05D001886 ORTHO05D004007 3.5e-07 58.2 85 45.9
Atru.chr3.3836 Acer truncatum HOM05D001886 ORTHO05D004007 5.9e-07 57.4 84 47.6
COL.COLO4_18467 Corchorus olitorius HOM05D001886 ORTHO05D004007 5.9e-07 57.4 85 47.1
MBI14_g24316_MAGBIO Magnolia biondii HOM05D001886 ORTHO05D004007 5.9e-07 57.4 84 48.8
Prupe.6G081800 Prunus persica HOM05D001886 ORTHO05D004007 5.9e-07 57.4 86 45.3
CARHR007610 Cardamine hirsuta HOM05D001886 ORTHO05D004007 1.0e-06 56.6 79 44.3
Nn2g10427 Nelumbo nucifera HOM05D001886 ORTHO05D004007 1.0e-06 56.6 86 45.3
Nn2g12929 Nelumbo nucifera HOM05D001886 ORTHO05D004007 1.0e-06 56.6 87 44.8
AT2G28725 Arabidopsis thaliana HOM05D001886 ORTHO05D004007 1.3e-06 56.2 76 47.4
BcaB02g06704 Brassica carinata HOM05D001886 ORTHO05D004007 1.7e-06 55.8 79 44.3
Gohir.D03G128600 Gossypium hirsutum HOM05D001886 ORTHO05D004007 2.2e-06 55.5 84 46.4
Gorai.003G135300 Gossypium raimondii HOM05D001886 ORTHO05D004007 2.2e-06 55.5 84 46.4
RcHm_v2.0_Chr5g0063581 Rosa chinensis HOM05D001886 ORTHO05D004007 2.2e-06 55.5 86 45.3
Hund04991 Selenicereus undatus HOM05D000437 ORTHO05D000324 2.2e-06 55.5 84 46.4
AUR62036093 Chenopodium quinoa HOM05D001886 ORTHO05D004007 2.9e-06 55.1 81 48.1
MD03G1097600 Malus domestica HOM05D001886 ORTHO05D004007 2.9e-06 55.1 85 43.5
C05p05710 Brassica napus HOM05D001886 ORTHO05D004007 3.8e-06 54.7 79 43.0
Cpa.g.sc190.15 Carica papaya HOM05D001886 ORTHO05D004007 5.0e-06 54.3 86 43.0
CiPaw.13G097900 Carya illinoinensis HOM05D001886 ORTHO05D004007 5.0e-06 54.3 85 45.9
PGR142G2414 Punica granatum HOM05D001886 ORTHO05D004007 5.0e-06 54.3 77 45.5
BcaC07g42494 Brassica carinata HOM05D001886 ORTHO05D004007 6.5e-06 53.9 79 41.8
Cfa011462 Carpinus fangiana HOM05D001886 ORTHO05D004007 6.5e-06 53.9 85 44.7
MELO3C003112.2 Cucumis melo HOM05D001886 ORTHO05D004007 8.5e-06 53.5 85 44.7
CsaV3_4G024780 Cucumis sativus L. HOM05D001886 ORTHO05D004007 8.5e-06 53.5 85 44.7


User provided reference genes

Program Settings