Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.5ILH08 Arachis hypogaea HOM05D004896 ORTHO05D006447 5.6e-168 594.3 335 100.0
arahy.Tifrunner.gnm1.ann1.10VWGS Arachis hypogaea HOM05D004896 ORTHO05D006447 6.0e-162 574.3 335 97.9
Manes.15G155100 Manihot esculenta HOM05D004896 ORTHO05D006447 2.8e-127 459.1 336 72.9
Ciclev10015882m.g Citrus clementina HOM05D004896 ORTHO05D006447 1.1e-126 457.2 273 83.2
Cpa.g.sc130.54 Carica papaya HOM05D004896 ORTHO05D006447 1.4e-126 456.8 271 83.4
GSVIVG01003974001 Vitis vinifera HOM05D004896 ORTHO05D006447 2.0e-125 453.0 269 82.9
Eucgr.I01701 Eucalyptus grandis HOM05D004896 ORTHO05D006447 3.4e-125 452.2 271 81.9
Lj1g0027814 Lotus japonicus HOM05D004896 ORTHO05D006447 3.4e-125 452.2 269 84.8
Ca_03861_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 5.9e-125 451.4 267 83.5
PGR142G1575 Punica granatum HOM05D004896 ORTHO05D006447 5.9e-125 451.4 257 86.4
MD09G1019000 Malus domestica HOM05D004896 ORTHO05D006447 7.7e-125 451.1 271 82.7
Ca_01399_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 1.3e-124 450.3 267 82.8
MBI19_g04325_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 5.0e-124 448.4 271 81.2
Psat3g168560 Pisum sativum HOM05D004896 ORTHO05D006447 5.0e-124 448.4 267 82.8
SGA_v2.0_scaffold135G34930 Striga asiatica HOM05D004896 ORTHO05D006447 6.5e-124 448.0 271 81.9
Nn5g27187 Nelumbo nucifera HOM05D004896 ORTHO05D006447 1.4e-123 446.8 275 81.8
Rhsim08G0046600 Rhododendron simsii HOM05D004896 ORTHO05D006447 1.4e-123 446.8 269 82.5
VMungo1080G0372 Vigna mungo HOM05D004896 ORTHO05D006447 1.4e-123 446.8 266 83.5
MSTRG.3120 Avicennia marina HOM05D004896 ORTHO05D006447 1.9e-123 446.4 268 81.3
CSS0017957 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 1.9e-123 446.4 266 83.5
Phvul.008G145713 Phaseolus vulgaris HOM05D004896 ORTHO05D006447 3.2e-123 445.7 265 83.8
Actinidia18427 Actinidia chinensis HOM05D004896 ORTHO05D006447 5.5e-123 444.9 337 68.8
Glyma.16G066000 Glycine max HOM05D004896 ORTHO05D006447 7.2e-123 444.5 270 81.9
Hma1.2p1_1484F.1_g286400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 9.4e-123 444.1 266 81.6
Prupe.3G298100 Prunus persica HOM05D004896 ORTHO05D006447 9.4e-123 444.1 339 73.5
Lj7A604T65 Lonicera japonica HOM05D004896 ORTHO05D006447 1.6e-122 443.4 256 84.8
Gohir.A05G342400 Gossypium hirsutum HOM05D004896 ORTHO05D006447 2.7e-122 442.6 270 81.5
Gorai.012G091200 Gossypium raimondii HOM05D004896 ORTHO05D006447 6.1e-122 441.4 270 81.1
CANSAT64G0177 Cannabis sativa HOM05D004896 ORTHO05D006447 1.0e-121 440.7 340 67.9
Potri.001G338200 Populus trichocarpa HOM05D004896 ORTHO05D006447 1.0e-121 440.7 338 71.0
QL02p073334 Quercus lobata HOM05D004896 ORTHO05D006447 1.4e-121 440.3 338 68.0
TAR629G1306 Trochodendron aralioides HOM05D004896 ORTHO05D006447 1.4e-121 440.3 273 81.0
ClCG05G013000 Citrullus lanatus HOM05D004896 ORTHO05D006447 2.3e-121 439.5 273 79.9
Hma1.2p1_1407F.1_g281400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 2.3e-121 439.5 265 81.1
Aqoxy1G02023 Aquilegia oxysepala HOM05D004896 ORTHO05D006447 3.9e-121 438.7 270 79.3
Duzib264G0232 Durio zibethinus HOM05D004896 ORTHO05D006447 5.2e-121 438.3 272 80.9
FvH4_6g52290 Fragaria vesca HOM05D004896 ORTHO05D006447 5.2e-121 438.3 336 67.6
FAN05G4015 Fragaria x ananassa HOM05D004896 ORTHO05D006447 5.2e-121 438.3 337 68.2
Hma1.2p1_0383F.1_g140290 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 8.8e-121 437.6 266 80.8
Ah.12g059440 Amaranthus hybridus HOM05D004896 ORTHO05D006447 1.5e-120 436.8 265 78.1
Thecc.04G026600 Theobroma cacao HOM05D004896 ORTHO05D006447 2.0e-120 436.4 274 80.3
FAN14G4168 Fragaria x ananassa HOM05D004896 ORTHO05D006447 5.7e-120 434.9 336 67.0
Medtr0018s0290 Medicago truncatula HOM05D004896 ORTHO05D006447 5.7e-120 434.9 268 79.9
TWI56G0223 Tripterygium wilfordii HOM05D004896 ORTHO05D006447 7.4e-120 434.5 266 81.2
Migut.H00045 Erythranthe guttata HOM05D004896 ORTHO05D006447 1.7e-119 433.3 268 79.1
FAN02G3298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.7e-119 433.3 336 67.0
CAN.G473.48 Capsicum annuum HOM05D004896 ORTHO05D006447 2.2e-119 433.0 265 78.9
Cfa007299 Carpinus fangiana HOM05D004896 ORTHO05D006447 2.2e-119 433.0 338 68.3
RcHm_v2.0_Chr2g0173821 Rosa chinensis HOM05D004896 ORTHO05D006447 3.7e-119 432.2 334 67.4
Lalb_Chr14g0362991 Lupinus albus HOM05D004896 ORTHO05D006447 4.8e-119 431.8 266 80.8
Sopen02g038330 Solanum pennellii HOM05D004896 ORTHO05D006447 4.8e-119 431.8 273 78.0
CsaV3_3G027540 Cucumis sativus L. HOM05D004896 ORTHO05D006447 6.3e-119 431.4 273 78.0
FAN09G1675 Fragaria x ananassa HOM05D004896 ORTHO05D006447 8.2e-119 431.0 337 67.4
Sed0025595 Sechium edule HOM05D004896 ORTHO05D006447 8.2e-119 431.0 268 78.7
TPR.G1112 Trifolium pratense HOM05D004896 ORTHO05D006447 8.2e-119 431.0 268 79.5
vmacro18309 Vaccinium macrocarpon HOM05D004896 ORTHO05D006447 1.1e-118 430.6 250 83.2
COL.COLO4_29242 Corchorus olitorius HOM05D004896 ORTHO05D006447 1.8e-118 429.9 269 80.3
Nitab4.5_0001031g0180 Nicotiana tabacum HOM05D004896 ORTHO05D006447 1.8e-118 429.9 274 78.1
Solyc02g093690.3 Solanum lycopersicum HOM05D004896 ORTHO05D006447 2.4e-118 429.5 270 78.1
AUR62030697 Chenopodium quinoa HOM05D004896 ORTHO05D006447 4.1e-118 428.7 252 81.3
PGSC0003DMG400012644 Solanum tuberosum HOM05D004896 ORTHO05D006447 4.1e-118 428.7 272 77.9
AUR62036338 Chenopodium quinoa HOM05D004896 ORTHO05D006447 1.6e-117 426.8 252 81.0
DCAR_021752 Daucus carota HOM05D004896 ORTHO05D006447 2.6e-117 426.0 268 78.0
Cc07_g00300 Coffea canephora HOM05D004896 ORTHO05D006447 3.5e-117 425.6 271 77.9
Hund14985 Selenicereus undatus HOM05D004896 ORTHO05D006447 5.9e-117 424.9 267 77.9
CiPaw.03G049000 Carya illinoinensis HOM05D004896 ORTHO05D006447 1.0e-116 424.1 267 79.0
ECA246G3787 Erigeron canadensis HOM05D004896 ORTHO05D006447 1.3e-116 423.7 266 77.1
CSS0036459 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 2.9e-116 422.5 318 69.8
Nitab4.5_0002158g0160 Nicotiana tabacum HOM05D004896 ORTHO05D006447 5.0e-116 421.8 272 76.8
EL10Ac9g21007 Beta vulgaris HOM05D004896 ORTHO05D006447 1.1e-115 420.6 265 76.6
HanXRQChr17g0549471 Helianthus annuus HOM05D004896 ORTHO05D006447 1.1e-115 420.6 265 77.7
EL10Ac5g10496 Beta vulgaris HOM05D004896 ORTHO05D006447 1.9e-115 419.9 256 78.9
Gohir.D04G080440 Gossypium hirsutum HOM05D004896 ORTHO05D006447 2.5e-115 419.5 255 81.6
THA.LOC104825307 Tarenaya hassleriana HOM05D004896 ORTHO05D006447 1.6e-114 416.8 270 77.4
unitig_0.g536 Utricularia gibba HOM05D004896 ORTHO05D006447 2.1e-114 416.4 267 76.0
Haze_14796 Corylus avellana HOM05D004896 ORTHO05D006447 8.0e-114 414.5 325 68.3
Lsat_1_v5_gn_0_30781 Lactuca sativa HOM05D004896 ORTHO05D006447 1.0e-113 414.1 265 75.8
BcaB06g27542 Brassica carinata HOM05D004896 ORTHO05D006447 1.4e-113 413.7 271 76.4
A04p13700 Brassica napus HOM05D004896 ORTHO05D006447 1.4e-113 413.7 270 76.7
C04p47490 Brassica napus HOM05D004896 ORTHO05D006447 1.4e-113 413.7 270 76.7
BolC4t26350H Brassica oleracea HOM05D004896 ORTHO05D006447 1.4e-113 413.7 270 76.7
BraA04t17030Z Brassica rapa HOM05D004896 ORTHO05D006447 1.4e-113 413.7 270 76.7
CiPaw.04G032200 Carya illinoinensis HOM05D004896 ORTHO05D006447 1.4e-113 413.7 254 80.3
ATR0099G063 Amborella trichopoda HOM05D004896 ORTHO05D006447 8.8e-113 411.0 255 77.3
FvH4_6g52310 Fragaria vesca HOM05D004896 ORTHO05D006447 2.6e-112 409.5 252 78.6
CARHR261290 Cardamine hirsuta HOM05D004896 ORTHO05D006447 4.4e-112 408.7 270 75.6
Carub.0007s3482 Capsella rubella HOM05D004896 ORTHO05D006447 7.5e-112 407.9 270 75.9
Dinv33394 Davidia involucrata HOM05D004896 ORTHO05D006447 7.5e-112 407.9 256 78.9
PSO675G8471 Papaver somniferum HOM05D004896 ORTHO05D006447 2.2e-111 406.4 265 75.8
AL7G49080 Arabidopsis lyrata HOM05D004896 ORTHO05D006447 3.7e-111 405.6 270 75.6
AT5G40660 Arabidopsis thaliana HOM05D004896 ORTHO05D006447 8.2e-111 404.4 270 75.6
Sabra16G0218900 Salix brachista HOM05D004896 ORTHO05D006447 1.1e-110 404.1 417 55.4
PSO541G0959 Papaver somniferum HOM05D004896 ORTHO05D006447 1.4e-110 403.7 265 75.1
Sp7g01200 Schrenkiella parvula HOM05D004896 ORTHO05D006447 1.8e-110 403.3 270 75.2
Zm00001eb329190 Zea mays HOM05D004896 ORTHO05D006447 3.1e-110 402.5 271 72.3
Thhalv10027828m.g Eutrema salsugineum HOM05D004896 ORTHO05D006447 7.0e-110 401.4 267 75.3
HPP92_020467 Vanilla planifolia HOM05D004896 ORTHO05D006447 2.7e-109 399.4 257 75.5
Aa31LG9G960 Aethionema arabicum HOM05D004896 ORTHO05D006447 1.5e-107 393.7 269 72.1
HPP92_026167 Vanilla planifolia HOM05D004896 ORTHO05D006447 2.1e-106 389.8 250 75.6
CDE07G0249 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 1.0e-105 387.5 258 74.0
Os07g0644000 Oryza sativa ssp. japonica HOM05D004896 ORTHO05D006447 2.3e-105 386.3 255 73.7
Atru.chr6.2473 Acer truncatum HOM05D004896 ORTHO05D006447 1.5e-104 383.6 304 69.1
MELO3C014823.2 Cucumis melo HOM05D004896 ORTHO05D006447 4.4e-104 382.1 238 79.8
RcHm_v2.0_Chr2g0174241 Rosa chinensis HOM05D004896 ORTHO05D006447 1.3e-100 370.5 276 68.8
Sc03g0007130 Simmondsia chinensis HOM05D004896 ORTHO05D006447 3.8e-100 369.0 302 69.2
Peaxi162Scf00420g00251 Petunia axillaris HOM05D004896 ORTHO05D006447 8.0e-98 361.3 273 67.4
SHI03827 Sapria himalayana HOM05D004896 ORTHO05D006447 4.4e-96 355.5 258 67.4
FAN14G0298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.0e-89 334.3 349 57.0
SEGI_10618 Sequoiadendron giganteum HOM05D004896 ORTHO05D006447 4.9e-87 325.5 263 61.6
Atru.chr3.2666 Acer truncatum HOM05D004896 ORTHO05D006447 7.0e-86 321.6 241 70.5
Oeu064389.1 Olea europaea HOM05D004896 ORTHO05D006447 3.9e-84 315.8 327 54.1
Sed0012039 Sechium edule HOM05D004896 ORTHO05D006447 1.1e-78 297.7 256 63.3
SGA_v2.0_scaffold18G08247 Striga asiatica HOM05D004896 ORTHO05D006447 7.0e-78 295.0 269 61.0
MD17G1019600 Malus domestica HOM05D004896 ORTHO05D006447 2.2e-63 246.9 217 62.7
Hma1.2p1_1484F.1_g286430 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 2.7e-61 240.0 138 81.9
Pp3c2_19250 Physcomitrium patens HOM05D004896 ORTHO05D006447 6.0e-61 238.8 247 49.8
Mapoly0004s0068 Marchantia polymorpha HOM05D004896 ORTHO05D006447 1.5e-59 234.2 236 51.3
SMO200G0187 Selaginella moellendorffii HOM05D004896 ORTHO05D006447 1.2e-58 231.1 238 48.7
Actinidia16947 Actinidia chinensis HOM05D004896 ORTHO05D006447 2.1e-58 230.3 140 81.4
Nitab4.5_0002158g0260 Nicotiana tabacum HOM05D002474 ORTHO05D007142 2.8e-58 229.9 144 79.2
EL10Ac5g11826 Beta vulgaris HOM05D004896 ORTHO05D006447 1.2e-56 224.6 150 70.7
AagrBONN_evm.TU.Sc2ySwM_362.2811 Anthoceros agrestis HOM05D004896 ORTHO05D006447 2.6e-56 223.4 251 45.4
Atru.chr4.450 Acer truncatum HOM05D004896 ORTHO05D006447 3.8e-55 219.5 208 62.0
CBR_g4059 Chara braunii HOM05D004896 ORTHO05D006447 4.6e-53 212.6 247 45.3
Hma1.2p1_1484F.1_g286403 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 6.6e-52 208.8 127 81.9
Hma1.2p1_1484F.1_g286440 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 6.6e-52 208.8 127 81.9
AUR62030692 Chenopodium quinoa HOM05D004896 ORTHO05D006447 3.3e-51 206.5 109 89.9
Cc06_g20980 Coffea canephora HOM05D004896 ORTHO05D006447 4.0e-49 199.5 170 64.1
Duzib147G0160 Durio zibethinus HOM05D004896 ORTHO05D006447 4.0e-49 199.5 125 77.6
PRCOL_00001693 Prasinoderma coloniale HOM05D004896 ORTHO05D006447 2.4e-41 173.7 239 38.5
MCO13G572 Micromonas commoda HOM05D004896 ORTHO05D006447 4.0e-41 172.9 250 39.6
Glyma.19G080702 Glycine max HOM05D004896 ORTHO05D006447 2.7e-37 160.2 104 76.9
MBI19_g02443_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 6.9e-33 145.6 91 79.1
Atru.chr11.190 Acer truncatum HOM05D004896 ORTHO05D006447 3.5e-29 133.3 84 77.4
Cre17.g726250 Chlamydomonas reinhardtii HOM05D004896 ORTHO05D006447 3.5e-29 133.3 215 37.2
Atru.chr7.121 Acer truncatum HOM05D005216 ORTHO05D006453 2.3e-28 130.6 84 77.4
Atru.chr2.3725 Acer truncatum HOM05D004896 ORTHO05D006447 1.4e-25 121.3 65 87.7
CDE12G0511 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 1.8e-25 120.9 81 74.1
Atru.chr1.36 Acer truncatum HOM05D004896 ORTHO05D006447 5.3e-25 119.4 65 86.2
Atru.chr2.563 Acer truncatum HOM05D004866 ORTHO05D005716 1.2e-24 118.2 65 86.2
BcaC04g20647 Brassica carinata HOM05D004896 ORTHO05D006447 4.2e-22 109.8 70 78.6
C09p41080 Brassica napus HOM05D004896 ORTHO05D028223 4.2e-22 109.8 70 78.6
BolC9t56987H Brassica oleracea HOM05D004896 ORTHO05D028223 4.2e-22 109.8 70 78.6
BraA05t20477Z Brassica rapa HOM05D004896 ORTHO05D024046 6.1e-21 105.9 70 74.3
Ah.07g205180 Amaranthus hybridus HOM05D004896 ORTHO05D060504 1.5e-19 101.3 176 39.8
BcaB01g05885 Brassica carinata HOM05D004896 ORTHO05D024046 1.1e-17 95.1 50 88.0
BolC7t42010H Brassica oleracea HOM05D004896 ORTHO05D028223 1.1e-17 95.1 52 86.5
Atru.chr1.2050 Acer truncatum HOM05D004896 ORTHO05D006447 1.4e-17 94.7 60 78.3
A05p15620 Brassica napus HOM05D004896 ORTHO05D024046 4.1e-17 93.2 60 75.0
BcaC01g04583 Brassica carinata HOM05D004896 ORTHO05D006447 2.9e-15 87.0 47 87.2
Actinidia35788 Actinidia chinensis HOM05D004896 ORTHO05D006447 8.8e-12 75.5 160 36.2
TAR628G1566 Trochodendron aralioides HOM05D004896 ORTHO05D006447 1.7e-10 71.2 46 71.7


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