Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.5GV78D Arachis hypogaea HOM05D005170 ORTHO05D006985 2.3e-122 442.2 219 100.0
arahy.Tifrunner.gnm1.ann1.66GFWV Arachis hypogaea HOM05D005170 ORTHO05D006985 2.1e-91 339.3 183 92.9
arahy.Tifrunner.gnm1.ann1.NM7AU0 Arachis hypogaea HOM05D005170 ORTHO05D006985 1.4e-90 336.7 177 93.8
arahy.Tifrunner.gnm1.ann1.3DLK77 Arachis hypogaea HOM05D005170 ORTHO05D006985 1.8e-90 336.3 183 92.3
arahy.Tifrunner.gnm1.ann1.87D3N1 Arachis hypogaea HOM05D005170 ORTHO05D006985 9.9e-81 303.9 182 86.8
arahy.Tifrunner.gnm1.ann1.QEN3W4 Arachis hypogaea HOM05D005170 ORTHO05D006985 1.5e-73 280.0 183 81.4
Lalb_Chr10g0092611 Lupinus albus HOM05D005170 ORTHO05D006985 1.5e-60 236.9 195 66.7
Glyma.18G276300 Glycine max HOM05D005170 ORTHO05D006985 3.4e-57 225.7 188 65.4
TPR.G3272 Trifolium pratense HOM05D005170 ORTHO05D006985 4.5e-57 225.3 188 66.0
Psat3g194480 Pisum sativum HOM05D005170 ORTHO05D006985 5.9e-57 224.9 188 64.9
Glyma.08G253900 Glycine max HOM05D005170 ORTHO05D006985 5.0e-56 221.9 188 61.7
Phvul.008G024500 Phaseolus vulgaris HOM05D005170 ORTHO05D006985 8.5e-56 221.1 187 64.7
Lj1g0005667 Lotus japonicus HOM05D005170 ORTHO05D006985 1.9e-55 219.9 188 62.2
Medtr7g017500 Medicago truncatula HOM05D005170 ORTHO05D006985 2.7e-54 216.1 187 63.6
VMungo1383G1046 Vigna mungo HOM05D005170 ORTHO05D006985 3.6e-54 215.7 177 67.2
Ca_06959_v3 Cicer arietinum L. HOM05D005170 ORTHO05D006985 4.3e-52 208.8 188 63.3
arahy.Tifrunner.gnm1.ann1.ASZ0YV Arachis hypogaea HOM05D005170 ORTHO05D006985 2.2e-48 196.4 107 89.7
Prupe.3G247200 Prunus persica HOM05D005170 ORTHO05D006985 1.5e-44 183.7 188 56.4
MD09G1076900 Malus domestica HOM05D005170 ORTHO05D006985 3.1e-42 176.0 188 54.8
Potri.004G111500 Populus trichocarpa HOM05D005170 ORTHO05D006985 1.0e-40 171.0 192 53.1
Cfa007711 Carpinus fangiana HOM05D005170 ORTHO05D006985 1.1e-39 167.5 192 53.1
CANSAT64G0674 Cannabis sativa HOM05D005170 ORTHO05D006985 3.2e-39 166.0 186 51.1
Manes.01G104800 Manihot esculenta HOM05D005170 ORTHO05D006985 5.5e-39 165.2 200 48.5
Sabra04G0072900 Salix brachista HOM05D005170 ORTHO05D006985 2.7e-38 162.9 193 51.3
FAN09G2425 Fragaria x ananassa HOM05D005170 ORTHO05D006985 1.0e-37 161.0 190 47.9
Dinv34895 Davidia involucrata HOM05D005170 ORTHO05D006985 1.4e-37 160.6 193 50.8
CiPaw.03G081400 Carya illinoinensis HOM05D005170 ORTHO05D006985 1.8e-37 160.2 213 47.4
QL02p064885 Quercus lobata HOM05D005170 ORTHO05D006985 3.0e-37 159.5 192 50.0
FAN05G5078 Fragaria x ananassa HOM05D005170 ORTHO05D006985 3.9e-37 159.1 191 48.7
Hma1.2p1_2186F.1_g316400 Hydrangea macrophylla HOM05D005170 ORTHO05D006985 5.2e-37 158.7 189 49.7
FvH4_6g46110 Fragaria vesca HOM05D005170 ORTHO05D006985 6.7e-37 158.3 191 50.3
FAN14G1739 Fragaria x ananassa HOM05D005170 ORTHO05D006985 6.7e-37 158.3 191 50.3
COL.COLO4_00229 Corchorus olitorius HOM05D005170 ORTHO05D006985 3.3e-36 156.0 192 47.4
CSS0017694 Camellia sinensis var. sinensis HOM05D005170 ORTHO05D006985 5.7e-36 155.2 183 50.3
CSS0024263 Camellia sinensis var. sinensis HOM05D005170 ORTHO05D006985 5.7e-36 155.2 183 50.3
GSVIVG01036517001 Vitis vinifera HOM05D005170 ORTHO05D006985 9.7e-36 154.5 212 46.2
Lj4A126T71 Lonicera japonica HOM05D005170 ORTHO05D006985 1.3e-35 154.1 191 51.3
RcHm_v2.0_Chr2g0164441 Rosa chinensis HOM05D005170 ORTHO05D006985 2.2e-35 153.3 191 49.2
CAN.G497.45 Capsicum annuum HOM05D005170 ORTHO05D006985 2.8e-35 152.9 191 47.6
TWI34G1112 Tripterygium wilfordii HOM05D005170 ORTHO05D006985 3.7e-35 152.5 179 55.3
vmacro05605 Vaccinium macrocarpon HOM05D005170 ORTHO05D006985 3.7e-35 152.5 192 51.0
vmacro17105 Vaccinium macrocarpon HOM05D005170 ORTHO05D006985 3.7e-35 152.5 192 51.0
vmacro23470 Vaccinium macrocarpon HOM05D005170 ORTHO05D006985 3.7e-35 152.5 192 51.0
Gohir.D07G185600 Gossypium hirsutum HOM05D005170 ORTHO05D006985 4.8e-35 152.1 238 40.8
Rhsim10G0060500 Rhododendron simsii HOM05D005170 ORTHO05D006985 4.8e-35 152.1 192 51.0
RcHm_v2.0_Chr2g0164481 Rosa chinensis HOM05D005170 ORTHO05D006985 6.3e-35 151.8 191 48.7
Gohir.A07G178500 Gossypium hirsutum HOM05D005170 ORTHO05D006985 1.1e-34 151.0 238 40.8
Nn4g23569 Nelumbo nucifera HOM05D005170 ORTHO05D006985 1.1e-34 151.0 191 45.5
Hund16252 Selenicereus undatus HOM05D005170 ORTHO05D006985 1.4e-34 150.6 190 48.9
ClCG07G016130 Citrullus lanatus HOM05D005170 ORTHO05D006985 2.4e-34 149.8 195 47.7
PGR004G2610 Punica granatum HOM05D005170 ORTHO05D006985 2.4e-34 149.8 192 47.9
Cc07_g04630 Coffea canephora HOM05D005170 ORTHO05D006985 4.1e-34 149.1 191 47.1
Sed0018763 Sechium edule HOM05D005170 ORTHO05D006985 7.0e-34 148.3 195 47.2
Cpa.g.sc14.254 Carica papaya HOM05D005170 ORTHO05D006985 9.1e-34 147.9 223 43.0
MELO3C018906.2 Cucumis melo HOM05D005170 ORTHO05D006985 1.2e-33 147.5 195 47.2
Thecc.04G110100 Theobroma cacao HOM05D005170 ORTHO05D006985 2.0e-33 146.7 235 39.6
CsaV3_4G009930 Cucumis sativus L. HOM05D005170 ORTHO05D006985 2.6e-33 146.4 225 41.8
Peaxi162Scf00020g02131 Petunia axillaris HOM05D005170 ORTHO05D006985 1.0e-32 144.4 191 47.6
Ah.16g100870 Amaranthus hybridus HOM05D005170 ORTHO05D006985 3.8e-32 142.5 196 45.4
PGSC0003DMG400001473 Solanum tuberosum HOM05D005170 ORTHO05D006985 6.5e-32 141.7 193 44.0
Nitab4.5_0002978g0100 Nicotiana tabacum HOM05D005170 ORTHO05D006985 8.5e-32 141.4 189 47.6
Solyc02g089360.4 Solanum lycopersicum HOM05D005170 ORTHO05D006985 1.9e-31 140.2 193 44.0
Ciclev10011153m.g Citrus clementina HOM05D005170 ORTHO05D006985 7.2e-31 138.3 221 42.5
Nitab4.5_0002171g0080 Nicotiana tabacum HOM05D005170 ORTHO05D006985 7.2e-31 138.3 187 48.1
Actinidia36275 Actinidia chinensis HOM05D005170 ORTHO05D006985 2.1e-30 136.7 178 48.3
MSTRG.2967 Avicennia marina HOM05D005170 ORTHO05D006985 2.1e-30 136.7 193 44.6
Eucgr.I02082 Eucalyptus grandis HOM05D005170 ORTHO05D006985 2.1e-30 136.7 188 47.9
HanXRQChr12g0380201 Helianthus annuus HOM05D005170 ORTHO05D006985 2.7e-30 136.3 177 47.5
Sopen02g034140 Solanum pennellii HOM05D005170 ORTHO05D006985 3.6e-30 136.0 193 43.0
EL10Ac2g04408 Beta vulgaris HOM05D005170 ORTHO05D006985 4.7e-30 135.6 193 45.1
Oeu062190.2 Olea europaea HOM05D005170 ORTHO05D006985 1.4e-29 134.0 185 45.4
AUR62023134 Chenopodium quinoa HOM05D005170 ORTHO05D006985 1.8e-29 133.7 196 39.8
Lsat_1_v5_gn_3_95261 Lactuca sativa HOM05D005170 ORTHO05D006985 1.8e-29 133.7 183 45.4
HPP92_019180 Vanilla planifolia HOM05D005170 ORTHO05D006985 4.0e-29 132.5 193 40.9
CDE02G1515 Ceratophyllum demersum HOM05D005170 ORTHO05D006985 6.7e-29 131.7 206 41.3
PSO339G2512 Papaver somniferum HOM05D005170 ORTHO05D006985 1.5e-28 130.6 180 44.4
Sc11g0008940 Simmondsia chinensis HOM05D005170 ORTHO05D006985 7.5e-28 128.3 167 44.3
Gorai.001G206200 Gossypium raimondii HOM05D005170 ORTHO05D006985 1.7e-27 127.1 222 38.3
PSO782G1791 Papaver somniferum HOM05D005170 ORTHO05D006985 2.8e-27 126.3 187 42.2
PSO063G4379 Papaver somniferum HOM05D005170 ORTHO05D006985 4.8e-27 125.6 187 43.3
FAN02G2580 Fragaria x ananassa HOM05D005170 ORTHO05D006985 8.2e-27 124.8 176 44.3
Aqoxy3G03767 Aquilegia oxysepala HOM05D005170 ORTHO05D006985 1.4e-26 124.0 180 44.4
Zm00001eb380550 Zea mays HOM05D005170 ORTHO05D006985 1.4e-26 124.0 190 41.1
Migut.H00575 Erythranthe guttata HOM05D005170 ORTHO05D006985 4.1e-26 122.5 188 44.7
ECA246G1099 Erigeron canadensis HOM05D005170 ORTHO05D006985 2.7e-25 119.8 183 43.2
Os06g0275900 Oryza sativa ssp. japonica HOM05D005170 ORTHO05D006985 3.5e-25 119.4 183 39.9
arahy.Tifrunner.gnm1.ann1.X5BDW5 Arachis hypogaea HOM05D005170 ORTHO05D006985 1.0e-24 117.9 73 83.6
Aa31LG9G16850 Aethionema arabicum HOM05D005170 ORTHO05D006985 1.3e-24 117.5 188 38.3
arahy.Tifrunner.gnm1.ann1.KW7YJP Arachis hypogaea HOM05D005170 ORTHO05D006985 2.2e-24 116.7 77 77.9
ATR0691G089 Amborella trichopoda HOM05D005170 ORTHO05D006985 1.9e-23 113.6 223 37.2
THA.LOC104805534 Tarenaya hassleriana HOM05D005170 ORTHO05D006985 1.2e-22 110.9 203 37.9
DCAR_007542 Daucus carota HOM05D005170 ORTHO05D006985 4.0e-21 105.9 177 39.5
AUR62009453 Chenopodium quinoa HOM05D005170 ORTHO05D006985 5.2e-21 105.5 193 35.8
SEGI_17824 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 6.8e-21 105.1 186 39.2
SGA_v2.0_scaffold52G19060 Striga asiatica HOM05D005170 ORTHO05D006985 2.0e-20 103.6 169 38.5
Actinidia18094 Actinidia chinensis HOM05D005170 ORTHO05D006985 2.6e-20 103.2 127 49.6
CARHR263780 Cardamine hirsuta HOM05D005170 ORTHO05D006985 1.0e-16 91.3 196 36.2
BcaB06g27252 Brassica carinata HOM05D005170 ORTHO05D006985 3.2e-15 86.3 194 32.5
Thhalv10027659m.g Eutrema salsugineum HOM05D005170 ORTHO05D006985 3.2e-15 86.3 195 32.8
BcaC02g09673 Brassica carinata HOM05D005170 ORTHO05D006985 4.7e-14 82.4 205 32.2
C04p45420 Brassica napus HOM05D005170 ORTHO05D006985 4.7e-14 82.4 205 32.2
BolC4t26124H Brassica oleracea HOM05D005170 ORTHO05D006985 4.7e-14 82.4 205 32.2
A04p11710 Brassica napus HOM05D005170 ORTHO05D006985 6.1e-14 82.0 202 32.2
BraA04t16838Z Brassica rapa HOM05D005170 ORTHO05D006985 6.1e-14 82.0 202 32.2
Carub.0007s3703 Capsella rubella HOM05D005170 ORTHO05D006985 6.1e-14 82.0 185 33.0
SHI25849 Sapria himalayana HOM05D005170 ORTHO05D006985 6.1e-14 82.0 197 33.0
AT5G38840 Arabidopsis thaliana HOM05D005170 ORTHO05D006985 7.5e-12 75.1 188 30.9
AL7G51600 Arabidopsis lyrata HOM05D005170 ORTHO05D006985 1.7e-11 73.9 187 31.0
unitig_899.g15113 Utricularia gibba HOM05D005170 ORTHO05D006985 2.2e-11 73.6 150 33.3
RcHm_v2.0_Chr2g0164301 Rosa chinensis HOM05D005170 ORTHO05D006985 8.3e-11 71.6 122 42.6
Sp7g03070 Schrenkiella parvula HOM05D005170 ORTHO05D006985 3.1e-10 69.7 204 27.9
Mapoly0045s0050 Marchantia polymorpha HOM05D005170 ORTHO05D006985 7.0e-10 68.6 143 35.7
Pp3c14_10960 Physcomitrium patens HOM05D005170 ORTHO05D006985 3.8e-08 62.8 156 29.5
AagrBONN_evm.TU.Sc2ySwM_344.2160 Anthoceros agrestis HOM05D005170 ORTHO05D006985 5.0e-08 62.4 188 31.9
AagrBONN_evm.TU.Sc2ySwM_344.2165 Anthoceros agrestis HOM05D005170 ORTHO05D006985 5.0e-08 62.4 188 31.9


User provided reference genes

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