Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.5G1G6M Arachis hypogaea HOM05D007479 ORTHO05D009416 3.3e-95 351.7 175 100.0
VMungo1383G0484 Vigna mungo HOM05D007479 ORTHO05D009416 6.5e-59 231.1 172 69.2
Phvul.001G201900 Phaseolus vulgaris HOM05D007479 ORTHO05D009416 1.6e-57 226.5 173 67.6
Glyma.19G206000 Glycine max HOM05D007479 ORTHO05D009416 4.7e-57 224.9 177 66.1
Lj1g0024237 Lotus japonicus HOM05D007479 ORTHO05D009416 5.7e-55 218.0 177 66.7
Lalb_Chr18g0047491 Lupinus albus HOM05D007479 ORTHO05D009416 1.6e-49 199.9 182 61.0
MD00G1056400 Malus domestica HOM05D007479 ORTHO05D009416 4.9e-46 188.3 137 67.9
QL12p023941 Quercus lobata HOM05D007479 ORTHO05D009416 6.3e-46 188.0 181 59.7
Prupe.8G252200 Prunus persica HOM05D007479 ORTHO05D009416 1.4e-45 186.8 152 63.8
Medtr7g107680 Medicago truncatula HOM05D007479 ORTHO05D009416 1.8e-45 186.4 127 71.7
FAN20G0962 Fragaria x ananassa HOM05D007479 ORTHO05D009416 2.4e-45 186.0 130 71.5
FAN27G0664 Fragaria x ananassa HOM05D007479 ORTHO05D009416 3.1e-45 185.7 130 71.5
Ca_09112_v3 Cicer arietinum L. HOM05D000335 ORTHO05D001251 4.1e-45 185.3 118 76.3
TWI59G0977 Tripterygium wilfordii HOM05D007479 ORTHO05D009416 9.1e-45 184.1 162 63.0
TWI59G1446 Tripterygium wilfordii HOM05D007479 ORTHO05D009416 9.1e-45 184.1 162 63.0
GSVIVG01011009001 Vitis vinifera HOM05D007479 ORTHO05D009416 9.1e-45 184.1 178 57.3
RcHm_v2.0_Chr6g0292541 Rosa chinensis HOM05D007479 ORTHO05D009416 1.6e-44 183.3 108 80.6
FvH4_2g24710 Fragaria vesca HOM05D007479 ORTHO05D009416 2.0e-44 183.0 127 71.7
FAN24G3263 Fragaria x ananassa HOM05D000112 ORTHO05D000564 2.0e-44 183.0 127 71.7
Cfa006037 Carpinus fangiana HOM05D007479 ORTHO05D009416 2.7e-44 182.6 149 65.1
Gohir.A08G072000 Gossypium hirsutum HOM05D007479 ORTHO05D009416 3.5e-44 182.2 123 73.2
CiPaw.07G099900 Carya illinoinensis HOM05D007479 ORTHO05D009416 7.7e-44 181.0 111 78.4
Gohir.D08G080200 Gossypium hirsutum HOM05D007479 ORTHO05D009416 1.0e-43 180.6 110 79.1
Gorai.004G085300 Gossypium raimondii HOM05D007479 ORTHO05D009416 1.0e-43 180.6 110 79.1
TPR.G32316 Trifolium pratense HOM05D007479 ORTHO05D009416 1.3e-43 180.3 176 59.7
Duzib133G1271 Durio zibethinus HOM05D007479 ORTHO05D009416 3.8e-43 178.7 168 57.1
Haze_04810 Corylus avellana HOM05D007479 ORTHO05D009416 5.0e-43 178.3 154 63.6
Atru.chr5.1282 Acer truncatum HOM05D007479 ORTHO05D009416 1.1e-42 177.2 138 63.0
Manes.01G213600 Manihot esculenta HOM05D007479 ORTHO05D009416 1.1e-42 177.2 157 61.8
CSS0010600 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 1.5e-42 176.8 142 63.4
CSS0014944 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 1.5e-42 176.8 142 63.4
Cpa.g.sc9.160 Carica papaya HOM05D007479 ORTHO05D009416 1.5e-42 176.8 128 69.5
Thecc.01G290200 Theobroma cacao HOM05D007479 ORTHO05D009416 1.5e-42 176.8 108 75.9
MELO3C015894.2 Cucumis melo HOM05D007479 ORTHO05D009416 1.9e-42 176.4 113 75.2
EL10Ac7g17366 Beta vulgaris HOM05D007479 ORTHO05D009416 2.5e-42 176.0 108 78.7
Ciclev10022531m.g Citrus clementina HOM05D007479 ORTHO05D009416 2.5e-42 176.0 130 66.2
Psat3g024840 Pisum sativum HOM05D007479 ORTHO05D009416 2.5e-42 176.0 105 79.0
AUR62036657 Chenopodium quinoa HOM05D007479 ORTHO05D009416 4.2e-42 175.3 105 79.0
CANSAT25G0138 Cannabis sativa HOM05D007479 ORTHO05D009416 7.2e-42 174.5 115 72.2
ClCG09G006510 Citrullus lanatus HOM05D007479 ORTHO05D009416 7.2e-42 174.5 159 59.1
CsaV3_7G028280 Cucumis sativus L. HOM05D007479 ORTHO05D009416 9.5e-42 174.1 113 73.5
Hma1.2p1_0209F.1_g089100 Hydrangea macrophylla HOM05D007479 ORTHO05D009416 9.5e-42 174.1 105 76.2
TAR362G0341 Trochodendron aralioides HOM05D007479 ORTHO05D009416 9.5e-42 174.1 143 65.0
COL.COLO4_08032 Corchorus olitorius HOM05D007479 ORTHO05D009416 3.6e-41 172.2 108 74.1
Sabra14G0101000 Salix brachista HOM05D007479 ORTHO05D009416 3.6e-41 172.2 102 79.4
PGR044G0517 Punica granatum HOM05D007479 ORTHO05D009416 6.1e-41 171.4 160 57.5
MSTRG.12593 Avicennia marina HOM05D007479 ORTHO05D009416 2.3e-40 169.5 119 68.1
Sed0025615 Sechium edule HOM05D007479 ORTHO05D009416 4.0e-40 168.7 162 57.4
Actinidia00698 Actinidia chinensis HOM05D007479 ORTHO05D009416 5.2e-40 168.3 130 65.4
CSS0048836 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 5.2e-40 168.3 142 62.7
CARHR251580 Cardamine hirsuta HOM05D007479 ORTHO05D009416 5.2e-40 168.3 129 65.1
Eucgr.K03432 Eucalyptus grandis HOM05D007479 ORTHO05D009416 6.8e-40 167.9 153 57.5
MBI19_g32765_MAGBIO Magnolia biondii HOM05D007479 ORTHO05D009416 6.8e-40 167.9 107 74.8
Oeu047908.1 Olea europaea HOM05D007479 ORTHO05D009416 8.9e-40 167.5 103 74.8
Rhsim13G0017200 Rhododendron simsii HOM05D007479 ORTHO05D009416 1.5e-39 166.8 142 62.0
Migut.N01396 Erythranthe guttata HOM05D007479 ORTHO05D009416 2.0e-39 166.4 104 71.2
Peaxi162Scf01039g00126 Petunia axillaris HOM05D007479 ORTHO05D009416 2.6e-39 166.0 108 71.3
AT4G03150 Arabidopsis thaliana HOM05D007479 ORTHO05D009416 3.4e-39 165.6 127 64.6
AL6G49780 Arabidopsis lyrata HOM05D007479 ORTHO05D009416 4.4e-39 165.2 106 71.7
Nitab4.5_0004150g0020 Nicotiana tabacum HOM05D007479 ORTHO05D009416 5.7e-39 164.9 107 72.9
Hund18029 Selenicereus undatus HOM05D007479 ORTHO05D009416 5.7e-39 164.9 107 73.8
Nitab4.5_0002093g0220 Nicotiana tabacum HOM05D007479 ORTHO05D009416 1.3e-38 163.7 107 72.0
Potri.014G135400 Populus trichocarpa HOM05D007479 ORTHO05D009416 1.3e-38 163.7 102 77.5
Solyc06g084470.4 Solanum lycopersicum HOM05D007479 ORTHO05D009416 1.3e-38 163.7 118 65.3
Cc01_g20220 Coffea canephora HOM05D007479 ORTHO05D009416 1.7e-38 163.3 142 57.0
Sopen06g035860 Solanum pennellii HOM05D007479 ORTHO05D009416 2.9e-38 162.5 118 64.4
Aqoxy2G03133 Aquilegia oxysepala HOM05D007479 ORTHO05D009416 3.7e-38 162.2 136 61.0
A09p02470 Brassica napus HOM05D007479 ORTHO05D009416 3.7e-38 162.2 143 57.3
BraA09t35894Z Brassica rapa HOM05D007479 ORTHO05D009416 3.7e-38 162.2 143 57.3
HanXRQChr11g0350171 Helianthus annuus HOM05D007479 ORTHO05D009416 3.7e-38 162.2 116 66.4
BcaB01g01976 Brassica carinata HOM05D007479 ORTHO05D009416 4.9e-38 161.8 107 70.1
Carub.0006s3390 Capsella rubella HOM05D007479 ORTHO05D009416 6.4e-38 161.4 115 66.1
Thhalv10029006m.g Eutrema salsugineum HOM05D007479 ORTHO05D009416 6.4e-38 161.4 160 54.4
BolC9t53187H Brassica oleracea HOM05D007479 ORTHO05D009416 8.3e-38 161.0 134 59.7
ECA236G2582 Erigeron canadensis HOM05D007479 ORTHO05D009416 8.3e-38 161.0 116 66.4
Sc17g0003550 Simmondsia chinensis HOM05D007479 ORTHO05D009416 1.8e-37 159.8 149 55.7
C09p02570 Brassica napus HOM05D007479 ORTHO05D009416 2.4e-37 159.5 143 55.9
PGSC0003DMG400024042 Solanum tuberosum HOM05D007479 ORTHO05D009416 2.4e-37 159.5 107 68.2
DCAR_002787 Daucus carota HOM05D007479 ORTHO05D009416 3.2e-37 159.1 108 67.6
Lsat_1_v5_gn_8_55221 Lactuca sativa HOM05D007479 ORTHO05D009416 3.2e-37 159.1 106 69.8
Sp6g03190 Schrenkiella parvula HOM05D007479 ORTHO05D009416 3.2e-37 159.1 107 70.1
PSO210G3923 Papaver somniferum HOM05D007479 ORTHO05D009416 4.1e-37 158.7 109 68.8
SGA_v2.0_scaffold172G39060 Striga asiatica HOM05D007479 ORTHO05D009416 4.1e-37 158.7 113 65.5
PSO572G0003 Papaver somniferum HOM05D007479 ORTHO05D009416 7.0e-37 157.9 109 69.7
PSO832G0938 Papaver somniferum HOM05D007479 ORTHO05D009416 7.0e-37 157.9 109 69.7
PSO832G2794 Papaver somniferum HOM05D007479 ORTHO05D009416 7.0e-37 157.9 109 69.7
Nn3g21272 Nelumbo nucifera HOM05D007479 ORTHO05D009416 9.2e-37 157.5 98 74.5
THA.LOC104826012 Tarenaya hassleriana HOM05D007479 ORTHO05D009416 9.2e-37 157.5 168 55.4
unitig_21.g20281 Utricularia gibba HOM05D007479 ORTHO05D009416 9.2e-37 157.5 117 63.2
Hma1.2p1_0209F.1_g089110 Hydrangea macrophylla HOM05D007479 ORTHO05D009416 4.6e-36 155.2 87 82.8
SalBow6G0786 Salvia bowleyana HOM05D007479 ORTHO05D009416 4.6e-36 155.2 113 65.5
HPP92_010636 Vanilla planifolia HOM05D007479 ORTHO05D009416 2.3e-35 152.9 137 58.4
AUR62034613 Chenopodium quinoa HOM05D007479 ORTHO05D009416 1.5e-34 150.2 88 81.8
ATR0706G261 Amborella trichopoda HOM05D001702 ORTHO05D001791 1.9e-34 149.8 101 67.3
CDE09G0484 Ceratophyllum demersum HOM05D007479 ORTHO05D009416 1.9e-34 149.8 111 64.9
Lj2P1185T15 Lonicera japonica HOM05D007479 ORTHO05D009416 4.3e-34 148.7 87 80.5
Os12g0534100 Oryza sativa ssp. japonica HOM05D007479 ORTHO05D009416 1.2e-33 147.1 105 65.7
vmacro02508 Vaccinium macrocarpon HOM05D007479 ORTHO05D009416 5.2e-32 141.7 85 78.8
SalBow8G4180 Salvia bowleyana HOM05D007479 ORTHO05D009416 2.9e-30 136.0 85 76.5
Pp3c5_13320 Physcomitrium patens HOM05D007479 ORTHO05D009416 1.2e-28 130.6 109 54.1
Mapoly0029s0155 Marchantia polymorpha HOM05D007479 ORTHO05D009416 1.0e-27 127.5 109 53.2
Mapoly0275s0001 Marchantia polymorpha HOM05D007479 ORTHO05D009416 1.0e-27 127.5 109 53.2
AagrBONN_evm.TU.Sc2ySwM_368.764 Anthoceros agrestis HOM05D007479 ORTHO05D009416 1.1e-26 124.0 105 53.3
CBR_g22325 Chara braunii HOM05D007479 ORTHO05D009416 4.7e-25 118.6 90 61.1
Dinv32992 Davidia involucrata HOM05D007479 ORTHO05D009416 1.7e-11 73.6 38 78.9


User provided reference genes

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