Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.5E4H9C Arachis hypogaea HOM05D007371 ORTHO05D009319 1.8e-85 319.3 174 100.0
Lalb_Chr07g0191781 Lupinus albus HOM05D007371 ORTHO05D009319 5.9e-28 128.3 84 84.5
Medtr5g063410 Medicago truncatula HOM05D007371 ORTHO05D009319 7.7e-28 127.9 84 82.1
Medtr4g006110 Medicago truncatula HOM05D007371 ORTHO05D009319 1.0e-27 127.5 84 82.1
Medtr6g042220 Medicago truncatula HOM05D007371 ORTHO05D009319 1.0e-27 127.5 84 82.1
Gohir.1Z049431 Gossypium hirsutum HOM05D007371 ORTHO05D009319 1.7e-27 126.7 84 82.1
Gohir.1Z049679 Gossypium hirsutum HOM05D007371 ORTHO05D009319 1.7e-27 126.7 84 82.1
Gohir.A02G134600 Gossypium hirsutum HOM05D007371 ORTHO05D009319 1.7e-27 126.7 84 82.1
Gohir.A09G046246 Gossypium hirsutum HOM05D007371 ORTHO05D009319 1.7e-27 126.7 84 82.1
Gohir.D04G175100 Gossypium hirsutum HOM05D007371 ORTHO05D009319 1.7e-27 126.7 84 82.1
Medtr7g021710 Medicago truncatula HOM05D007371 ORTHO05D009319 2.3e-27 126.3 84 82.1
Nn064s42209 Nelumbo nucifera HOM05D007371 ORTHO05D009319 3.8e-27 125.6 84 81.0
DCAR_032539 Daucus carota HOM05D007371 ORTHO05D009319 6.5e-27 124.8 84 81.0
Nn3g20215 Nelumbo nucifera HOM05D007371 ORTHO05D009319 6.5e-27 124.8 87 78.2
Hma1.2p1_0656F.1_g196806 Hydrangea macrophylla HOM05D007371 ORTHO05D009319 1.5e-26 123.6 84 81.0
Peaxi162Scf00338g00628 Petunia axillaris HOM05D007371 ORTHO05D009319 2.5e-26 122.9 84 79.8
RcHm_v2.0_Chr5g0017201 Rosa chinensis HOM05D007371 ORTHO05D009319 2.5e-26 122.9 84 79.8
RcHm_v2.0_CPg0502761 Rosa chinensis HOM05D007371 ORTHO05D009319 2.5e-26 122.9 84 79.8
Solyc03g013600.1 Solanum lycopersicum HOM05D007371 ORTHO05D009319 2.5e-26 122.9 84 77.4
PGR111G0032 Punica granatum HOM05D007371 ORTHO05D009319 3.3e-26 122.5 84 79.8
SalBow1G7973 Salvia bowleyana HOM05D007371 ORTHO05D009319 3.3e-26 122.5 84 81.0
Nn1g08633 Nelumbo nucifera HOM05D007371 ORTHO05D009319 5.5e-26 121.7 84 77.4
RcHm_v2.0_Chr5g0043021 Rosa chinensis HOM05D007371 ORTHO05D009319 5.5e-26 121.7 84 78.6
CAN.G1526.6 Capsicum annuum HOM05D007371 ORTHO05D009319 7.2e-26 121.3 84 79.8
CAN.G278.2 Capsicum annuum HOM05D007371 ORTHO05D009319 7.2e-26 121.3 84 79.8
CAN.G939.5 Capsicum annuum HOM05D007371 ORTHO05D009319 7.2e-26 121.3 84 79.8
HanXRQChr00c0289g0573141 Helianthus annuus HOM05D007371 ORTHO05D009319 1.2e-25 120.6 84 78.6
HanXRQChr02g0059721 Helianthus annuus HOM05D007371 ORTHO05D009319 1.2e-25 120.6 84 78.6
HanXRQChr09g0258501 Helianthus annuus HOM05D007371 ORTHO05D009319 1.2e-25 120.6 84 78.6
HanXRQChr15g0465431 Helianthus annuus HOM05D007371 ORTHO05D009319 1.2e-25 120.6 84 78.6
HanXRQChr15g0465461 Helianthus annuus HOM05D007371 ORTHO05D009319 1.2e-25 120.6 84 78.6
HanXRQChr17g0569751 Helianthus annuus HOM05D007371 ORTHO05D009319 1.2e-25 120.6 84 78.6
HanXRQCPg0580341 Helianthus annuus HOM05D007371 ORTHO05D009319 1.2e-25 120.6 84 78.6
AL9U11956 Arabidopsis lyrata HOM05D007371 ORTHO05D009319 2.1e-25 119.8 84 79.8
Potri.013G075100 Populus trichocarpa HOM05D007371 ORTHO05D009319 2.1e-25 119.8 84 77.4
Migut.D01251 Erythranthe guttata HOM05D007371 ORTHO05D009319 3.6e-25 119.0 84 78.6
Lj2P1238T112 Lonicera japonica HOM05D007371 ORTHO05D009319 4.7e-25 118.6 84 77.4
Lj9P89T22 Lonicera japonica HOM05D007371 ORTHO05D009319 4.7e-25 118.6 84 77.4
Lju5009P0T52 Lonicera japonica HOM05D007371 ORTHO05D009319 4.7e-25 118.6 84 77.4
PSO548G0046 Papaver somniferum HOM05D007371 ORTHO05D009319 6.1e-25 118.2 84 78.6
ATCG01080 Arabidopsis thaliana HOM05D007371 ORTHO05D009319 1.4e-24 117.1 84 77.4
Glyma.19G081000 Glycine max HOM05D007371 ORTHO05D009319 1.8e-24 116.7 77 81.8
C09p24650 Brassica napus HOM05D007371 ORTHO05D009319 4.0e-24 115.5 84 77.4
C09p40180 Brassica napus HOM05D007371 ORTHO05D009319 4.0e-24 115.5 84 77.4
BolC2t10597H Brassica oleracea HOM05D007371 ORTHO05D009319 4.0e-24 115.5 84 77.4
BolSC29t60507H Brassica oleracea HOM05D007371 ORTHO05D009319 4.0e-24 115.5 84 77.4
BolSC29t60547H Brassica oleracea HOM05D007371 ORTHO05D009319 4.0e-24 115.5 84 77.4
BolSC29t60622H Brassica oleracea HOM05D007371 ORTHO05D009319 4.0e-24 115.5 84 77.4
BolSC35t60691H Brassica oleracea HOM05D007371 ORTHO05D009319 4.0e-24 115.5 84 77.4
BolSC37t60794H Brassica oleracea HOM05D007371 ORTHO05D009319 4.0e-24 115.5 84 77.4
BolSC45t60908H Brassica oleracea HOM05D007371 ORTHO05D009319 4.0e-24 115.5 84 77.4
BolSC46t60957H Brassica oleracea HOM05D007371 ORTHO05D009319 4.0e-24 115.5 84 77.4
BolSC47t61064H Brassica oleracea HOM05D007371 ORTHO05D009319 4.0e-24 115.5 84 77.4
BolSC56t61236H Brassica oleracea HOM05D007371 ORTHO05D009319 4.0e-24 115.5 84 77.4
BraA10t43431Z Brassica rapa HOM05D007371 ORTHO05D009319 4.0e-24 115.5 84 77.4
BraSC103t45430Z Brassica rapa HOM05D007371 ORTHO05D009319 4.0e-24 115.5 84 77.4
BraSC143t45659Z Brassica rapa HOM05D007371 ORTHO05D009319 4.0e-24 115.5 84 77.4
BraSC179t45773Z Brassica rapa HOM05D007371 ORTHO05D009319 4.0e-24 115.5 84 77.4
BraSC59t46552Z Brassica rapa HOM05D007371 ORTHO05D009319 4.0e-24 115.5 84 77.4
CAN.G965.5 Capsicum annuum HOM05D007371 ORTHO05D009319 5.2e-24 115.2 84 76.2
CARHR282450 Cardamine hirsuta HOM05D007371 ORTHO05D009319 4.4e-23 112.1 84 76.2
BolSC49t61144H Brassica oleracea HOM05D007371 ORTHO05D009319 7.5e-23 111.3 82 76.8
TAR625G0296 Trochodendron aralioides HOM05D007371 ORTHO05D009319 7.5e-23 111.3 84 72.6
CAN.G256.22 Capsicum annuum HOM05D007371 ORTHO05D009319 1.3e-22 110.5 87 72.4
HanXRQChr17g0569721 Helianthus annuus HOM05D007371 ORTHO05D009319 1.3e-22 110.5 73 82.2
Solyc07g026910.3 Solanum lycopersicum HOM05D007371 ORTHO05D009319 1.7e-22 110.2 80 76.2
BolC9t56922H Brassica oleracea HOM05D007371 ORTHO05D009319 4.9e-22 108.6 87 70.1
CAN.G262.7 Capsicum annuum HOM05D007371 ORTHO05D009319 8.3e-22 107.8 83 71.1
Solyc02g011770.1 Solanum lycopersicum HOM05D007371 ORTHO05D009319 8.3e-22 107.8 90 67.8
BraSC138t45534Z Brassica rapa HOM05D007371 ORTHO05D009319 3.5e-20 102.4 85 70.6
BolC2t10612H Brassica oleracea HOM05D007371 ORTHO05D009319 1.3e-19 100.5 72 79.2
Gohir.D12G089301 Gossypium hirsutum HOM05D007371 ORTHO05D009319 2.3e-19 99.8 71 77.5
HanXRQChr00c0703g0576941 Helianthus annuus HOM05D007371 ORTHO05D009319 8.6e-19 97.8 65 80.0
Lalb_Chr09g0335451 Lupinus albus HOM05D007371 ORTHO05D009319 8.6e-19 97.8 65 80.0
HanXRQChr01g0000251 Helianthus annuus HOM05D007371 ORTHO05D009319 2.5e-18 96.3 69 79.7
Solyc11g021217.1 Solanum lycopersicum HOM05D007371 ORTHO05D009319 1.2e-17 94.0 78 70.5
Gorai.013G109900 Gossypium raimondii HOM05D007371 ORTHO05D009319 1.6e-17 93.6 60 81.7
C02p24280 Brassica napus HOM05D007371 ORTHO05D009319 5.8e-15 85.1 122 48.4
HanXRQChr02g0037971 Helianthus annuus HOM05D007371 ORTHO05D009319 3.7e-14 82.4 69 69.6
BolC7t43856H Brassica oleracea HOM05D007371 ORTHO05D009319 3.2e-13 79.3 56 73.2
Gohir.D06G133700 Gossypium hirsutum HOM05D007371 ORTHO05D009319 2.7e-12 76.3 80 60.0
HanXRQChr02g0038001 Helianthus annuus HOM05D007371 ORTHO05D009319 4.3e-10 68.9 61 62.3
Lsat_1_v5_gn_6_54121 Lactuca sativa HOM05D007371 ORTHO05D009319 4.3e-10 68.9 48 75.0
HanXRQChr11g0323761 Helianthus annuus HOM05D007371 ORTHO05D009319 9.5e-10 67.8 78 57.7
Aa31LG5G21710 Aethionema arabicum HOM05D007371 ORTHO05D009319 2.1e-09 66.6 79 57.0
Nitab4.5_0007979g0070 Nicotiana tabacum HOM05D007371 ORTHO05D009319 2.8e-09 66.2 47 74.5
Lalb_Chr11g0071331 Lupinus albus HOM05D007371 ORTHO05D009319 4.0e-08 62.4 47 70.2
CsaV3_UNG210150 Cucumis sativus L. HOM05D001200 ORTHO05D009713 8.9e-08 61.2 45 68.9
Gohir.D02G169550 Gossypium hirsutum HOM05D007371 ORTHO05D009319 2.6e-07 59.7 39 74.4


User provided reference genes

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