Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.5B6C8S Arachis hypogaea HOM05D000816 ORTHO05D082878 9.2e-78 293.9 196 100.0
arahy.Tifrunner.gnm1.ann1.10U64H Arachis hypogaea HOM05D000816 ORTHO05D005265 9.0e-41 171.0 153 85.6
arahy.Tifrunner.gnm1.ann1.SCIL2E Arachis hypogaea HOM05D000816 ORTHO05D005265 4.2e-30 135.6 143 55.9
arahy.Tifrunner.gnm1.ann1.CPLC2W Arachis hypogaea HOM05D000816 ORTHO05D005265 1.2e-24 117.5 152 49.3
arahy.Tifrunner.gnm1.ann1.TK9G7V Arachis hypogaea HOM05D000001 ORTHO05D010702 1.0e-20 104.4 158 68.4
arahy.Tifrunner.gnm1.ann1.9QU84Y Arachis hypogaea HOM05D000816 ORTHO05D084696 3.3e-19 99.4 157 51.0
arahy.Tifrunner.gnm1.ann1.Q63BAR Arachis hypogaea HOM05D000816 ORTHO05D005265 5.3e-17 92.0 81 61.7
arahy.Tifrunner.gnm1.ann1.LP1IUI Arachis hypogaea HOM05D000816 ORTHO05D005265 5.9e-16 88.6 94 76.6
arahy.Tifrunner.gnm1.ann1.ULF2Q7 Arachis hypogaea HOM05D001600 ORTHO05D001502 8.5e-15 84.7 157 54.8
arahy.Tifrunner.gnm1.ann1.QA75XA Arachis hypogaea HOM05D000046 ORTHO05D087738 1.0e-12 77.8 42 88.1
arahy.Tifrunner.gnm1.ann1.4CX26M Arachis hypogaea HOM05D000816 ORTHO05D084344 1.4e-12 77.4 37 94.6
arahy.Tifrunner.gnm1.ann1.SM2P8D Arachis hypogaea HOM05D000001 ORTHO05D018420 1.8e-12 77.0 59 64.4
arahy.Tifrunner.gnm1.ann1.X48TX3 Arachis hypogaea HOM05D000046 ORTHO05D000195 2.5e-11 73.2 42 81.0
arahy.Tifrunner.gnm1.ann1.DS2WG6 Arachis hypogaea HOM05D000001 ORTHO05D009373 1.3e-10 70.9 40 87.5
arahy.Tifrunner.gnm1.ann1.2ES05R Arachis hypogaea HOM05D000173 ORTHO05D000106 3.7e-10 69.3 41 80.5
arahy.Tifrunner.gnm1.ann1.D1XR3E Arachis hypogaea HOM05D000001 ORTHO05D009373 4.1e-09 65.9 31 93.5
arahy.Tifrunner.gnm1.ann1.MZB5SE Arachis hypogaea HOM05D000816 ORTHO05D085049 4.1e-09 65.9 36 86.1
arahy.Tifrunner.gnm1.ann1.Q4N9S1 Arachis hypogaea HOM05D000001 ORTHO05D009373 4.1e-09 65.9 31 93.5
Aqoxy2G01570 Aquilegia oxysepala HOM05D000001 ORTHO05D018420 1.7e-07 60.5 83 42.2
Medtr1g073890 Medicago truncatula HOM05D000816 ORTHO05D005265 2.2e-07 60.1 30 93.3
Ca_05395_v3 Cicer arietinum L. HOM05D000816 ORTHO05D005265 2.9e-07 59.7 32 87.5
Medtr1g044135 Medicago truncatula HOM05D000816 ORTHO05D005265 2.9e-07 59.7 32 87.5
TPR.G15880 Trifolium pratense HOM05D000816 ORTHO05D005265 2.9e-07 59.7 32 87.5
Atru.chr4.2139 Acer truncatum HOM05D000816 ORTHO05D005265 5.0e-07 58.9 32 84.4
AagrBONN_evm.TU.Sc2ySwM_344.293 Anthoceros agrestis HOM05D000001 ORTHO05D000003 5.0e-07 58.9 98 33.7
Lj1g0021128 Lotus japonicus HOM05D000001 ORTHO05D009373 5.0e-07 58.9 41 70.7
AagrBONN_evm.TU.Sc2ySwM_228.5860 Anthoceros agrestis HOM05D000001 ORTHO05D000003 6.5e-07 58.5 31 77.4
Glyma.10G008200 Glycine max HOM05D000816 ORTHO05D005265 8.5e-07 58.2 32 84.4
Lj6g0000947 Lotus japonicus HOM05D000816 ORTHO05D005265 8.5e-07 58.2 32 84.4
Lalb_Chr19g0128421 Lupinus albus HOM05D000816 ORTHO05D005265 8.5e-07 58.2 32 84.4
Phvul.007G272000 Phaseolus vulgaris HOM05D000816 ORTHO05D005265 8.5e-07 58.2 32 84.4
Psat6g105520 Pisum sativum HOM05D000816 ORTHO05D005265 8.5e-07 58.2 32 84.4
TPR.G23357 Trifolium pratense HOM05D002319 ORTHO05D002374 8.5e-07 58.2 41 65.9
VMungo0720G0129 Vigna mungo HOM05D000816 ORTHO05D005265 8.5e-07 58.2 32 84.4
AagrBONN_evm.TU.Sc2ySwM_368.76 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.1e-06 57.8 41 63.4
Glyma.10G188300 Glycine max HOM05D000816 ORTHO05D005265 1.1e-06 57.8 30 90.0
Glyma.20G202500 Glycine max HOM05D000816 ORTHO05D005265 1.1e-06 57.8 30 90.0
TPR.G26444 Trifolium pratense HOM05D000816 ORTHO05D005265 1.1e-06 57.8 30 90.0
AagrBONN_evm.TU.Sc2ySwM_228.2750 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.4e-06 57.4 41 61.0
arahy.Tifrunner.gnm1.ann1.GN45GV Arachis hypogaea HOM05D000816 ORTHO05D005265 1.4e-06 57.4 31 87.1
VMungo0720G1782 Vigna mungo HOM05D000816 ORTHO05D005265 1.9e-06 57.0 32 81.2
AagrBONN_evm.TU.Sc2ySwM_228.2894 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.5e-06 56.6 41 58.5
AagrBONN_evm.TU.Sc2ySwM_228.3650 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.5e-06 56.6 41 63.4
AagrBONN_evm.TU.Sc2ySwM_344.5643 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.5e-06 56.6 41 61.0
CiPaw.01G188100 Carya illinoinensis HOM05D000816 ORTHO05D005265 2.5e-06 56.6 33 78.8
Lalb_Chr24g0400651 Lupinus albus HOM05D000001 ORTHO05D010702 2.5e-06 56.6 40 65.0
Potri.008G164700 Populus trichocarpa HOM05D000816 ORTHO05D005265 2.5e-06 56.6 33 78.8
Sabra08G0125300 Salix brachista HOM05D000816 ORTHO05D005265 2.5e-06 56.6 33 78.8
Atru.chr8.1428 Acer truncatum HOM05D000001 ORTHO05D009373 3.2e-06 56.2 41 68.3
AagrBONN_evm.TU.Sc2ySwM_117.1341 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.2e-06 56.2 41 58.5
AagrBONN_evm.TU.Sc2ySwM_117.3489 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.2e-06 56.2 41 58.5
AagrBONN_evm.TU.Sc2ySwM_228.5856 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.2e-06 56.2 41 58.5
AagrBONN_evm.TU.Sc2ySwM_344.3500 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.2e-06 56.2 31 77.4
AagrBONN_evm.TU.Sc2ySwM_344.5479 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.2e-06 56.2 29 75.9
AagrBONN_evm.TU.Sc2ySwM_362.40 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.2e-06 56.2 41 58.5
FvH4_4g03090 Fragaria vesca HOM05D000816 ORTHO05D005265 3.2e-06 56.2 33 78.8
FAN12G0506 Fragaria x ananassa HOM05D000816 ORTHO05D005265 3.2e-06 56.2 33 78.8
FAN17G0545 Fragaria x ananassa HOM05D000816 ORTHO05D005265 3.2e-06 56.2 33 78.8
Glyma.20G087700 Glycine max HOM05D000816 ORTHO05D005265 3.2e-06 56.2 32 81.2
Lj5g0006884 Lotus japonicus HOM05D000816 ORTHO05D005265 3.2e-06 56.2 30 86.7
Psat6g132840 Pisum sativum HOM05D000816 ORTHO05D005265 3.2e-06 56.2 30 86.7
Sabra10G0034500 Salix brachista HOM05D000816 ORTHO05D005265 3.2e-06 56.2 33 81.8
AagrBONN_evm.TU.Sc2ySwM_228.324 Anthoceros agrestis HOM05D000001 ORTHO05D000003 4.2e-06 55.8 41 58.5
AagrBONN_evm.TU.Sc2ySwM_344.5624 Anthoceros agrestis HOM05D000001 ORTHO05D000003 4.2e-06 55.8 41 58.5
AagrBONN_evm.TU.Sc2ySwM_368.107 Anthoceros agrestis HOM05D000001 ORTHO05D000003 4.2e-06 55.8 41 58.5
AagrBONN_evm.TU.Sc2ySwM_368.110 Anthoceros agrestis HOM05D000001 ORTHO05D000003 4.2e-06 55.8 41 58.5
AagrBONN_evm.TU.Sc2ySwM_344.3820 Anthoceros agrestis HOM05D000001 ORTHO05D000003 5.5e-06 55.5 41 61.0
AagrBONN_evm.TU.Sc2ySwM_344.5640 Anthoceros agrestis HOM05D000001 ORTHO05D000003 5.5e-06 55.5 31 77.4
AagrBONN_evm.TU.Sc2ySwM_368.59 Anthoceros agrestis HOM05D000001 ORTHO05D000003 5.5e-06 55.5 39 64.1
Lalb_Chr21g0312381 Lupinus albus HOM05D000816 ORTHO05D005265 5.5e-06 55.5 30 83.3
AagrBONN_evm.TU.Sc2ySwM_117.2529 Anthoceros agrestis HOM05D000001 ORTHO05D000003 7.2e-06 55.1 41 58.5
AagrBONN_evm.TU.Sc2ySwM_117.3663 Anthoceros agrestis HOM05D000001 ORTHO05D000003 7.2e-06 55.1 31 71.0
AagrBONN_evm.TU.Sc2ySwM_199.28 Anthoceros agrestis HOM05D000001 ORTHO05D000003 7.2e-06 55.1 39 61.5
AagrBONN_evm.TU.Sc2ySwM_228.1099 Anthoceros agrestis HOM05D000001 ORTHO05D000003 7.2e-06 55.1 39 61.5
AagrBONN_evm.TU.Sc2ySwM_228.1117 Anthoceros agrestis HOM05D000001 ORTHO05D000003 7.2e-06 55.1 39 61.5
AagrBONN_evm.TU.Sc2ySwM_228.4406 Anthoceros agrestis HOM05D000001 ORTHO05D000003 7.2e-06 55.1 34 64.7
AagrBONN_evm.TU.Sc2ySwM_228.5874 Anthoceros agrestis HOM05D000001 ORTHO05D000003 7.2e-06 55.1 41 61.0
AagrBONN_evm.TU.Sc2ySwM_340.528 Anthoceros agrestis HOM05D000001 ORTHO05D000003 7.2e-06 55.1 41 61.0
AagrBONN_evm.TU.Sc2ySwM_340.562 Anthoceros agrestis HOM05D000001 ORTHO05D000003 7.2e-06 55.1 39 61.5
AagrBONN_evm.TU.Sc2ySwM_344.428 Anthoceros agrestis HOM05D000001 ORTHO05D000003 7.2e-06 55.1 31 74.2
AagrBONN_evm.TU.Sc2ySwM_344.5118 Anthoceros agrestis HOM05D000001 ORTHO05D000003 7.2e-06 55.1 41 56.1
AagrBONN_evm.TU.Sc2ySwM_344.62 Anthoceros agrestis HOM05D000001 ORTHO05D000003 7.2e-06 55.1 41 61.0
AagrBONN_evm.TU.Sc2ySwM_362.92 Anthoceros agrestis HOM05D000001 ORTHO05D000003 7.2e-06 55.1 41 58.5
AagrBONN_evm.TU.Sc2ySwM_368.2333 Anthoceros agrestis HOM05D000001 ORTHO05D000003 7.2e-06 55.1 41 58.5
AagrBONN_evm.TU.Sc2ySwM_368.3261 Anthoceros agrestis HOM05D000001 ORTHO05D000003 7.2e-06 55.1 39 61.5
AagrBONN_evm.TU.Sc2ySwM_368.3439 Anthoceros agrestis HOM05D000001 ORTHO05D000003 7.2e-06 55.1 41 58.5
AagrBONN_evm.TU.Sc2ySwM_368.674 Anthoceros agrestis HOM05D000001 ORTHO05D000003 7.2e-06 55.1 41 61.0
AagrBONN_evm.TU.Sc2ySwM_369.30 Anthoceros agrestis HOM05D000001 ORTHO05D000003 7.2e-06 55.1 39 61.5
AL7G35760 Arabidopsis lyrata HOM05D000001 ORTHO05D000003 7.2e-06 55.1 32 71.9
AT4G18520 Arabidopsis thaliana HOM05D000001 ORTHO05D000003 7.2e-06 55.1 32 71.9
BcaC06g30577 Brassica carinata HOM05D000001 ORTHO05D000003 7.2e-06 55.1 32 71.9
A03p51370 Brassica napus HOM05D000001 ORTHO05D000003 7.2e-06 55.1 32 71.9
CANSAT78G1340 Cannabis sativa HOM05D000816 ORTHO05D005265 7.2e-06 55.1 32 81.2
Carub.0007s2271 Capsella rubella HOM05D000001 ORTHO05D000003 7.2e-06 55.1 32 71.9
Ca_09814_v3 Cicer arietinum L. HOM05D000816 ORTHO05D005265 7.2e-06 55.1 30 86.7
COL.COLO4_15825 Corchorus olitorius HOM05D000816 ORTHO05D005265 7.2e-06 55.1 32 81.2
Glyma.03G184300 Glycine max HOM05D000001 ORTHO05D009373 7.2e-06 55.1 31 71.0
Hma1.2p1_2760F.1_g328070 Hydrangea macrophylla HOM05D000001 ORTHO05D000003 7.2e-06 55.1 63 41.3
Lalb_Chr03g0037091 Lupinus albus HOM05D000816 ORTHO05D005265 7.2e-06 55.1 32 81.2
MD13G1210100 Malus domestica HOM05D000816 ORTHO05D005265 7.2e-06 55.1 33 75.8
MD16G1213000 Malus domestica HOM05D000816 ORTHO05D005265 7.2e-06 55.1 33 75.8
Prupe.1G034600 Prunus persica HOM05D000816 ORTHO05D005265 7.2e-06 55.1 33 75.8
Sc19g0003490 Simmondsia chinensis HOM05D000816 ORTHO05D005265 7.2e-06 55.1 32 78.1
TWI53G0400 Tripterygium wilfordii HOM05D000816 ORTHO05D005265 7.2e-06 55.1 32 81.2
TWI53G0538 Tripterygium wilfordii HOM05D000816 ORTHO05D005265 7.2e-06 55.1 32 81.2
GSVIVG01027725001 Vitis vinifera HOM05D000816 ORTHO05D005265 7.2e-06 55.1 32 81.2
AagrBONN_evm.TU.Sc2ySwM_117.341 Anthoceros agrestis HOM05D000001 ORTHO05D000003 9.4e-06 54.7 34 61.8
AagrBONN_evm.TU.Sc2ySwM_117.3842 Anthoceros agrestis HOM05D000001 ORTHO05D000003 9.4e-06 54.7 41 58.5
AagrBONN_evm.TU.Sc2ySwM_117.4187 Anthoceros agrestis HOM05D000001 ORTHO05D000003 9.4e-06 54.7 39 64.1
AagrBONN_evm.TU.Sc2ySwM_228.18 Anthoceros agrestis HOM05D000001 ORTHO05D000003 9.4e-06 54.7 41 56.1
AagrBONN_evm.TU.Sc2ySwM_340.2015 Anthoceros agrestis HOM05D000001 ORTHO05D000003 9.4e-06 54.7 41 63.4
AagrBONN_evm.TU.Sc2ySwM_368.2387 Anthoceros agrestis HOM05D000001 ORTHO05D000003 9.4e-06 54.7 41 61.0
Haze_11333 Corylus avellana HOM05D000816 ORTHO05D005265 9.4e-06 54.7 32 78.1
Medtr7g105440 Medicago truncatula HOM05D000001 ORTHO05D009373 9.4e-06 54.7 31 74.2


User provided reference genes

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