Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.583R3C Arachis hypogaea HOM05D004238 ORTHO05D014893 1.3e-55 219.5 116 100.0
arahy.Tifrunner.gnm1.ann1.NZ4Q1A Arachis hypogaea HOM05D000129 ORTHO05D014893 2.0e-35 152.5 218 49.5
arahy.Tifrunner.gnm1.ann1.4RSR2L Arachis hypogaea HOM05D004238 ORTHO05D014893 1.8e-28 129.4 111 72.1
arahy.Tifrunner.gnm1.ann1.DRRV3Z Arachis hypogaea HOM05D000129 ORTHO05D014893 4.8e-26 121.3 201 46.8
arahy.Tifrunner.gnm1.ann1.KCMD1F Arachis hypogaea HOM05D004238 ORTHO05D004934 1.5e-14 83.2 42 97.6
arahy.Tifrunner.gnm1.ann1.NC6GJT Arachis hypogaea HOM05D004238 ORTHO05D004934 1.5e-14 83.2 42 97.6
arahy.Tifrunner.gnm1.ann1.8NU3PL Arachis hypogaea HOM05D004238 ORTHO05D004934 9.4e-14 80.5 42 92.9
arahy.Tifrunner.gnm1.ann1.QA2PAR Arachis hypogaea HOM05D004238 ORTHO05D004934 1.6e-13 79.7 42 92.9
arahy.Tifrunner.gnm1.ann1.78LW43 Arachis hypogaea HOM05D004238 ORTHO05D004934 4.7e-13 78.2 42 90.5
arahy.Tifrunner.gnm1.ann1.QI3NWI Arachis hypogaea HOM05D006876 ORTHO05D008708 6.1e-13 77.8 42 92.9
arahy.Tifrunner.gnm1.ann1.N68Y16 Arachis hypogaea HOM05D003444 ORTHO05D003963 2.3e-12 75.9 72 66.7
Glyma.08G094600 Glycine max HOM05D004238 ORTHO05D004934 6.8e-12 74.3 42 85.7
VMungo0251G1679 Vigna mungo HOM05D004238 ORTHO05D004934 6.8e-12 74.3 42 85.7
arahy.Tifrunner.gnm1.ann1.BQH8MW Arachis hypogaea HOM05D003444 ORTHO05D003963 1.5e-11 73.2 51 80.4
Phvul.002G182700 Phaseolus vulgaris HOM05D004238 ORTHO05D004934 1.5e-11 73.2 42 83.3
arahy.Tifrunner.gnm1.ann1.74UG6U Arachis hypogaea HOM05D000129 ORTHO05D014893 2.0e-11 72.8 73 65.8
arahy.Tifrunner.gnm1.ann1.VBPI8N Arachis hypogaea HOM05D000129 ORTHO05D014893 2.0e-11 72.8 73 65.8
Glyma.05G139300 Glycine max HOM05D004238 ORTHO05D004934 4.4e-11 71.6 42 81.0
Lj4g0001453 Lotus japonicus HOM05D004238 ORTHO05D004934 2.2e-10 69.3 42 78.6
Ca_11587_v3 Cicer arietinum L. HOM05D004238 ORTHO05D004934 2.4e-09 65.9 42 73.8
Lalb_Chr00c06g0404671 Lupinus albus HOM05D004238 ORTHO05D004934 7.0e-09 64.3 42 71.4
Lalb_Chr13g0293671 Lupinus albus HOM05D004238 ORTHO05D004934 7.0e-09 64.3 42 71.4
CSS0018341 Camellia sinensis var. sinensis HOM05D004238 ORTHO05D004934 1.2e-08 63.5 42 69.0
CSS0035838 Camellia sinensis var. sinensis HOM05D004238 ORTHO05D004934 1.2e-08 63.5 42 69.0
TPR.G5108 Trifolium pratense HOM05D004238 ORTHO05D004934 1.2e-08 63.5 42 71.4
TWI15G0256 Tripterygium wilfordii HOM05D004238 ORTHO05D004934 1.2e-08 63.5 72 48.6
Manes.01G014900 Manihot esculenta HOM05D004238 ORTHO05D004934 1.6e-08 63.2 42 69.0
Psat0s2250g0040 Pisum sativum HOM05D005720 ORTHO05D006984 2.0e-08 62.8 42 71.4
Psat5g132800 Pisum sativum HOM05D004238 ORTHO05D004934 2.0e-08 62.8 42 71.4
Psat7g083560 Pisum sativum HOM05D004238 ORTHO05D004934 2.0e-08 62.8 42 71.4
CANSAT80G2380 Cannabis sativa HOM05D004238 ORTHO05D004934 4.5e-08 61.6 42 69.0
arahy.Tifrunner.gnm1.ann1.K93WBA Arachis hypogaea HOM05D004238 ORTHO05D004934 1.0e-07 60.5 31 93.5
MD14G1229600 Malus domestica HOM05D004238 ORTHO05D004934 1.3e-07 60.1 42 69.0
CiPaw.16G088800 Carya illinoinensis HOM05D004238 ORTHO05D004934 1.7e-07 59.7 42 64.3
Dinv28139 Davidia involucrata HOM05D004238 ORTHO05D004934 1.7e-07 59.7 42 66.7
Haze_18725 Corylus avellana HOM05D004238 ORTHO05D004934 2.3e-07 59.3 42 64.3
Hund02354 Selenicereus undatus HOM05D004238 ORTHO05D004934 2.9e-07 58.9 42 66.7
MD06G1220000 Malus domestica HOM05D004238 ORTHO05D004934 3.8e-07 58.5 42 66.7
Rhsim08G0130500 Rhododendron simsii HOM05D004238 ORTHO05D004934 6.6e-07 57.8 42 61.9
Rhsim08G0130600 Rhododendron simsii HOM05D004238 ORTHO05D004934 6.6e-07 57.8 42 61.9
Oeu000985.1 Olea europaea HOM05D004238 ORTHO05D004934 8.6e-07 57.4 78 39.7
Duzib084G0471 Durio zibethinus HOM05D004238 ORTHO05D004934 1.1e-06 57.0 42 61.9
Lj9C425T3 Lonicera japonica HOM05D004238 ORTHO05D004934 1.1e-06 57.0 42 64.3
Nn4g23948 Nelumbo nucifera HOM05D004238 ORTHO05D004934 1.5e-06 56.6 42 61.9
PGR083G1292 Punica granatum HOM05D004238 ORTHO05D004934 1.5e-06 56.6 42 66.7
Hma1.2p1_1283F.1_g272760 Hydrangea macrophylla HOM05D004238 ORTHO05D004934 1.9e-06 56.2 42 61.9
C05p47680 Brassica napus HOM05D004238 ORTHO05D004934 2.5e-06 55.8 42 64.3
BolC5t33477H Brassica oleracea HOM05D004238 ORTHO05D004934 2.5e-06 55.8 42 64.3
Psat0s1333g0160 Pisum sativum HOM05D004238 ORTHO05D004934 2.5e-06 55.8 37 70.3
BraA05t21977Z Brassica rapa HOM05D004238 ORTHO05D004934 3.3e-06 55.5 42 64.3
Carub.0003s1804 Capsella rubella HOM05D004238 ORTHO05D004934 3.3e-06 55.5 72 43.1
Dinv12220 Davidia involucrata HOM05D004238 ORTHO05D004934 3.3e-06 55.5 42 59.5
Aqoxy3G00204 Aquilegia oxysepala HOM05D004238 ORTHO05D004934 5.5e-06 54.7 42 61.9
Atru.chr9.900 Acer truncatum HOM05D004238 ORTHO05D004934 7.2e-06 54.3 61 42.6
Eucgr.B00825 Eucalyptus grandis HOM05D004238 ORTHO05D004934 9.5e-06 53.9 42 64.3
Thhalv10022164m.g Eutrema salsugineum HOM05D004238 ORTHO05D004934 9.5e-06 53.9 61 42.6
GSVIVG01008335001 Vitis vinifera HOM05D004238 ORTHO05D004934 9.5e-06 53.9 42 61.9


User provided reference genes

Program Settings