Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.54ACLN Arachis hypogaea HOM05D003037 ORTHO05D003659 2.1e-32 141.7 69 100.0
arahy.Tifrunner.gnm1.ann1.1LPG6U Arachis hypogaea HOM05D003037 ORTHO05D003659 7.1e-25 116.7 68 79.4
arahy.Tifrunner.gnm1.ann1.3Q8GGF Arachis hypogaea HOM05D003037 ORTHO05D003659 8.1e-21 103.2 63 79.4
arahy.Tifrunner.gnm1.ann1.Y8ZHMJ Arachis hypogaea HOM05D003037 ORTHO05D003659 8.1e-21 103.2 63 79.4
ClCG11G013340 Citrullus lanatus HOM05D003037 ORTHO05D003659 8.1e-21 103.2 63 76.2
Atru.chr6.760 Acer truncatum HOM05D003037 ORTHO05D003659 1.1e-20 102.8 63 77.8
arahy.Tifrunner.gnm1.ann1.HXJ4DU Arachis hypogaea HOM05D003037 ORTHO05D001609 1.1e-20 102.8 63 77.8
Phvul.006G218100 Phaseolus vulgaris HOM05D003037 ORTHO05D003659 1.1e-20 102.8 63 77.8
Sc16g0002460 Simmondsia chinensis HOM05D003037 ORTHO05D003659 1.1e-20 102.8 63 77.8
Ciclev10003581m.g Citrus clementina HOM05D003037 ORTHO05D003659 1.4e-20 102.4 63 76.2
MELO3C011826.2 Cucumis melo HOM05D003037 ORTHO05D003659 1.4e-20 102.4 63 74.6
CsaV3_5G029840 Cucumis sativus L. HOM05D003037 ORTHO05D003659 1.4e-20 102.4 63 74.6
Lj4g0001882 Lotus japonicus HOM05D003037 ORTHO05D003659 1.4e-20 102.4 63 76.2
Ca_00048_v3 Cicer arietinum L. HOM05D003037 ORTHO05D003659 1.8e-20 102.1 63 76.2
COL.COLO4_17755 Corchorus olitorius HOM05D003037 ORTHO05D003659 1.8e-20 102.1 63 76.2
Medtr4g130680 Medicago truncatula HOM05D003037 ORTHO05D003659 1.8e-20 102.1 63 76.2
Hma1.2p1_0427F.1_g150700 Hydrangea macrophylla HOM05D003037 ORTHO05D003659 2.4e-20 101.7 63 76.2
MBI05_g00183_MAGBIO Magnolia biondii HOM05D003037 ORTHO05D003659 2.4e-20 101.7 63 76.2
TAR381G0039 Trochodendron aralioides HOM05D003037 ORTHO05D003659 2.4e-20 101.7 63 76.2
TAR624G0307 Trochodendron aralioides HOM05D003037 ORTHO05D003659 2.4e-20 101.7 63 76.2
VMungo0540G1935 Vigna mungo HOM05D003037 ORTHO05D003659 2.4e-20 101.7 63 76.2
Aqoxy6G01993 Aquilegia oxysepala HOM05D003037 ORTHO05D003659 3.1e-20 101.3 63 74.6
Haze_01828 Corylus avellana HOM05D003037 ORTHO05D003659 3.1e-20 101.3 63 76.2
Glyma.19G177100 Glycine max HOM05D003037 ORTHO05D003659 3.1e-20 101.3 63 76.2
GSVIVG01023275001 Vitis vinifera HOM05D003037 ORTHO05D003659 3.1e-20 101.3 63 74.6
Migut.B00789 Erythranthe guttata HOM05D003037 ORTHO05D003659 4.0e-20 100.9 63 73.0
Gohir.A12G043400 Gossypium hirsutum HOM05D003037 ORTHO05D003659 4.0e-20 100.9 63 76.2
Gohir.D12G042900 Gossypium hirsutum HOM05D003037 ORTHO05D003659 4.0e-20 100.9 63 76.2
Gorai.008G044900 Gossypium raimondii HOM05D003037 ORTHO05D003659 4.0e-20 100.9 63 76.2
PSO675G4829 Papaver somniferum HOM05D003037 ORTHO05D003659 4.0e-20 100.9 63 74.6
CDE11G0137 Ceratophyllum demersum HOM05D003037 ORTHO05D003659 5.2e-20 100.5 63 73.0
Actinidia00185 Actinidia chinensis HOM05D003037 ORTHO05D003659 6.9e-20 100.1 63 73.0
Gohir.D04G175800 Gossypium hirsutum HOM05D003037 ORTHO05D003659 6.9e-20 100.1 63 74.6
Gorai.012G167100 Gossypium raimondii HOM05D003037 ORTHO05D003659 6.9e-20 100.1 63 74.6
Sed0009851 Sechium edule HOM05D003037 ORTHO05D003659 6.9e-20 100.1 63 73.0
PGSC0003DMG400024926 Solanum tuberosum HOM05D003037 ORTHO05D003659 6.9e-20 100.1 63 74.6
Aqoxy6G01972 Aquilegia oxysepala HOM05D003037 ORTHO05D003659 8.9e-20 99.8 64 71.9
CSS0012029 Camellia sinensis var. sinensis HOM05D003037 ORTHO05D003659 8.9e-20 99.8 63 74.6
CSS0041282 Camellia sinensis var. sinensis HOM05D003037 ORTHO05D003659 8.9e-20 99.8 63 74.6
Dinv19397 Davidia involucrata HOM05D003037 ORTHO05D003659 8.9e-20 99.8 63 74.6
Gohir.A04G130600 Gossypium hirsutum HOM05D003037 ORTHO05D003659 8.9e-20 99.8 63 73.0
Nitab4.5_0002596g0060 Nicotiana tabacum HOM05D003037 ORTHO05D003659 8.9e-20 99.8 63 73.0
Actinidia39012 Actinidia chinensis HOM05D003037 ORTHO05D003659 1.2e-19 99.4 63 74.6
Cfa005476 Carpinus fangiana HOM05D003037 ORTHO05D003659 1.2e-19 99.4 63 74.6
Manes.07G022900 Manihot esculenta HOM05D003037 ORTHO05D003659 1.2e-19 99.4 63 71.4
SGA_v2.0_scaffold272G46366 Striga asiatica HOM05D003037 ORTHO05D003659 1.2e-19 99.4 63 73.0
Duzib248G0822 Durio zibethinus HOM05D003037 ORTHO05D003659 1.5e-19 99.0 63 74.6
Glyma.03G176400 Glycine max HOM05D003037 ORTHO05D003659 1.5e-19 99.0 63 74.6
PSO541G5800 Papaver somniferum HOM05D003037 ORTHO05D003659 1.5e-19 99.0 63 73.0
Prupe.8G013600 Prunus persica HOM05D003037 ORTHO05D003659 1.5e-19 99.0 63 71.4
PGR042G0094 Punica granatum HOM05D003037 ORTHO05D003659 1.5e-19 99.0 63 69.8
Rhsim11G0125200 Rhododendron simsii HOM05D003037 ORTHO05D003659 1.5e-19 99.0 63 71.4
Medtr2g006040 Medicago truncatula HOM05D003037 ORTHO05D003659 2.0e-19 98.6 63 76.2
CiPaw.05G051700 Carya illinoinensis HOM05D003037 ORTHO05D003659 2.6e-19 98.2 63 71.4
MD10G1009700 Malus domestica HOM05D003037 ORTHO05D003659 2.6e-19 98.2 63 73.0
Peaxi162Scf00011g00092 Petunia axillaris HOM05D003037 ORTHO05D003659 2.6e-19 98.2 63 71.4
DCAR_025355 Daucus carota HOM05D003037 ORTHO05D003659 3.4e-19 97.8 63 69.8
SalBow3G2424 Salvia bowleyana HOM05D003037 ORTHO05D003659 3.4e-19 97.8 63 71.4
Solyc01g103750.4 Solanum lycopersicum HOM05D003037 ORTHO05D003659 3.4e-19 97.8 63 73.0
Sopen01g046150 Solanum pennellii HOM05D003037 ORTHO05D003659 3.4e-19 97.8 63 73.0
CDE05G1085 Ceratophyllum demersum HOM05D003037 ORTHO05D003659 4.4e-19 97.4 60 73.3
Duzib052G1010 Durio zibethinus HOM05D003037 ORTHO05D003659 4.4e-19 97.4 63 74.6
Hma1.2p1_1108F.1_g257915 Hydrangea macrophylla HOM05D003037 ORTHO05D003659 4.4e-19 97.4 63 73.0
Hma1.2p1_1108F.1_g257920 Hydrangea macrophylla HOM05D003037 ORTHO05D003659 4.4e-19 97.4 63 73.0
Migut.N00833 Erythranthe guttata HOM05D003037 ORTHO05D003659 5.8e-19 97.1 63 71.4
Lj9C300T15 Lonicera japonica HOM05D003037 ORTHO05D003659 5.8e-19 97.1 63 68.3
Ah.03g137100 Amaranthus hybridus HOM05D003037 ORTHO05D003659 7.6e-19 96.7 63 73.0
AT1G09795 Arabidopsis thaliana HOM05D003037 ORTHO05D003659 7.6e-19 96.7 63 66.7
Manes.10G120100 Manihot esculenta HOM05D003037 ORTHO05D003659 7.6e-19 96.7 63 71.4
EL10Ac6g14061 Beta vulgaris HOM05D003037 ORTHO05D003659 1.3e-18 95.9 63 71.4
BcaC02g10704 Brassica carinata HOM05D003037 ORTHO05D003659 1.3e-18 95.9 63 69.8
Cpa.g.sc30.45 Carica papaya HOM05D003037 ORTHO05D003659 1.3e-18 95.9 63 69.8
FvH4_7g02550 Fragaria vesca HOM05D003037 ORTHO05D003659 1.3e-18 95.9 63 69.8
FAN01G1632 Fragaria x ananassa HOM05D003037 ORTHO05D003659 1.3e-18 95.9 63 69.8
FAN06G4382 Fragaria x ananassa HOM05D003037 ORTHO05D003659 1.3e-18 95.9 63 69.8
FAN10G2304 Fragaria x ananassa HOM05D003037 ORTHO05D003659 1.3e-18 95.9 63 69.8
MD05G1010900 Malus domestica HOM05D003037 ORTHO05D003659 1.3e-18 95.9 63 68.3
Peaxi162Scf00002g02511 Petunia axillaris HOM05D003037 ORTHO05D003659 1.3e-18 95.9 63 69.8
vmacro01725 Vaccinium macrocarpon HOM05D003037 ORTHO05D003659 1.3e-18 95.9 63 68.3
AL1G20370 Arabidopsis lyrata HOM05D003037 ORTHO05D003659 1.7e-18 95.5 63 68.3
A09p18570 Brassica napus HOM05D003037 ORTHO05D003659 1.7e-18 95.5 64 68.8
Carub.0001s0915 Capsella rubella HOM05D003037 ORTHO05D003659 1.7e-18 95.5 63 68.3
CARHR009780 Cardamine hirsuta HOM05D003037 ORTHO05D003659 1.7e-18 95.5 63 68.3
Potri.019G057200 Populus trichocarpa HOM05D003037 ORTHO05D003659 1.7e-18 95.5 63 68.3
BolC4t24107H Brassica oleracea HOM05D003037 ORTHO05D003659 2.2e-18 95.1 64 68.8
Lsat_1_v5_gn_9_120700 Lactuca sativa HOM05D003037 ORTHO05D003659 2.2e-18 95.1 63 73.0
THA.LOC104823696 Tarenaya hassleriana HOM05D003037 ORTHO05D003659 2.2e-18 95.1 63 68.3
BcaC04g22114 Brassica carinata HOM05D003037 ORTHO05D003659 2.9e-18 94.7 63 68.3
CANSAT35G1041 Cannabis sativa HOM05D003037 ORTHO05D003659 2.9e-18 94.7 63 73.0
FAN03G1983 Fragaria x ananassa HOM05D003037 ORTHO05D003659 2.9e-18 94.7 63 68.3
QL02p100067 Quercus lobata HOM05D003037 ORTHO05D003659 2.9e-18 94.7 63 68.3
QL02p100153 Quercus lobata HOM05D003037 ORTHO05D003659 2.9e-18 94.7 63 66.7
SGA_v2.0_scaffold8G04432 Striga asiatica HOM05D003037 ORTHO05D003659 2.9e-18 94.7 63 68.3
ATR0661G422 Amborella trichopoda HOM05D003037 ORTHO05D003659 3.8e-18 94.4 63 66.7
Potri.004G222400 Populus trichocarpa HOM05D003037 ORTHO05D003659 3.8e-18 94.4 63 69.8
Sed0025195 Sechium edule HOM05D003037 ORTHO05D003659 3.8e-18 94.4 63 68.3
MSTRG.16497 Avicennia marina HOM05D003037 ORTHO05D003659 4.9e-18 94.0 63 68.3
BcaC05g24849 Brassica carinata HOM05D003037 ORTHO05D003659 4.9e-18 94.0 63 66.7
C05p07880 Brassica napus HOM05D003037 ORTHO05D003659 4.9e-18 94.0 63 66.7
C09p23190 Brassica napus HOM05D003037 ORTHO05D003659 4.9e-18 94.0 64 67.2
BolC5t29539H Brassica oleracea HOM05D003037 ORTHO05D003659 4.9e-18 94.0 63 66.7
BolC9t55238H Brassica oleracea HOM05D003037 ORTHO05D003659 4.9e-18 94.0 64 67.2
AUR62041122 Chenopodium quinoa HOM05D003037 ORTHO05D003659 4.9e-18 94.0 63 69.8
Nn4g24648 Nelumbo nucifera HOM05D003037 ORTHO05D003659 4.9e-18 94.0 63 69.8
CARHR053980 Cardamine hirsuta HOM05D003037 ORTHO05D003659 6.4e-18 93.6 63 68.3
RcHm_v2.0_Chr1g0321271 Rosa chinensis HOM05D003037 ORTHO05D003659 6.4e-18 93.6 63 68.3
THA.LOC104816806 Tarenaya hassleriana HOM05D003037 ORTHO05D003659 6.4e-18 93.6 63 68.3
Thhalv10007791m.g Eutrema salsugineum HOM05D003037 ORTHO05D003659 8.4e-18 93.2 63 66.7
PGR142G1570 Punica granatum HOM05D003037 ORTHO05D003659 8.4e-18 93.2 63 69.8
Sp1g08400 Schrenkiella parvula HOM05D003037 ORTHO05D003659 8.4e-18 93.2 63 66.7
BraA09t37483Z Brassica rapa HOM05D003037 ORTHO05D003659 1.1e-17 92.8 64 67.2
unitig_747.g21264 Utricularia gibba HOM05D003037 ORTHO05D003659 1.1e-17 92.8 63 66.7
Ah.02g126950 Amaranthus hybridus HOM05D003037 ORTHO05D003659 1.4e-17 92.4 63 69.8
AUR62014220 Chenopodium quinoa HOM05D003037 ORTHO05D003659 1.4e-17 92.4 63 68.3
Sabra01G0168500 Salix brachista HOM05D003037 ORTHO05D003659 1.4e-17 92.4 63 69.8
Aa31LG2G11000 Aethionema arabicum HOM05D003037 ORTHO05D003659 1.9e-17 92.0 63 66.7
BcaC09g49512 Brassica carinata HOM05D003037 ORTHO05D003659 1.9e-17 92.0 63 66.7
Carub.0002s0655 Capsella rubella HOM05D003037 ORTHO05D003659 1.9e-17 92.0 63 66.7
TWI75G1787 Tripterygium wilfordii HOM05D003037 ORTHO05D003659 1.9e-17 92.0 63 66.7
AL2G17980 Arabidopsis lyrata HOM05D003037 ORTHO05D003659 2.4e-17 91.7 63 66.7
A06p06470 Brassica napus HOM05D003037 ORTHO05D003659 2.4e-17 91.7 63 65.1
BraA06t23858Z Brassica rapa HOM05D003037 ORTHO05D003659 2.4e-17 91.7 63 65.1
A01p28170 Brassica napus HOM05D003037 ORTHO05D003659 3.2e-17 91.3 64 65.6
C01p35730 Brassica napus HOM05D003037 ORTHO05D003659 3.2e-17 91.3 64 65.6
BolC1t03532H Brassica oleracea HOM05D003037 ORTHO05D003659 3.2e-17 91.3 64 65.6
BraA01t02947Z Brassica rapa HOM05D003037 ORTHO05D003659 3.2e-17 91.3 64 65.6
Lsat_1_v5_gn_9_120721 Lactuca sativa HOM05D003037 ORTHO05D003659 3.2e-17 91.3 63 69.8
Thhalv10023501m.g Eutrema salsugineum HOM05D003037 ORTHO05D003659 5.4e-17 90.5 63 66.7
AT1G58080 Arabidopsis thaliana HOM05D003037 ORTHO05D003659 7.1e-17 90.1 63 66.7
ECA240G1415 Erigeron canadensis HOM05D003037 ORTHO05D003659 9.3e-17 89.7 63 68.3
HanXRQChr07g0187481 Helianthus annuus HOM05D003037 ORTHO05D003659 1.2e-16 89.4 63 68.3
Prupe.8G013100 Prunus persica HOM05D003037 ORTHO05D003659 1.2e-16 89.4 63 65.1
TWI12G1167 Tripterygium wilfordii HOM05D003037 ORTHO05D003659 1.2e-16 89.4 63 63.5
ECA236G0695 Erigeron canadensis HOM05D003037 ORTHO05D003659 2.1e-16 88.6 63 68.3
HanXRQChr03g0065191 Helianthus annuus HOM05D003037 ORTHO05D003659 2.1e-16 88.6 63 68.3
Sp2g05490 Schrenkiella parvula HOM05D003037 ORTHO05D003659 2.7e-16 88.2 63 63.5
SEGI_29627 Sequoiadendron giganteum HOM05D003037 ORTHO05D003659 6.0e-16 87.0 63 65.1
Aa31LG1G5170 Aethionema arabicum HOM05D003037 ORTHO05D003659 1.0e-15 86.3 63 61.9
Cc02_g22990 Coffea canephora HOM05D003037 ORTHO05D003659 1.3e-15 85.9 63 66.7
CAN.G798.49 Capsicum annuum HOM05D003037 ORTHO05D003659 1.7e-15 85.5 63 63.5
Eucgr.G00352 Eucalyptus grandis HOM05D003037 ORTHO05D003659 1.7e-15 85.5 63 61.9
AL2G18010 Arabidopsis lyrata HOM05D003037 ORTHO05D003659 3.0e-15 84.7 62 59.7
MSTRG.27854 Avicennia marina HOM05D003037 ORTHO05D003659 3.9e-15 84.3 63 58.7
Nitab4.5_0000948g0100 Nicotiana tabacum HOM05D003037 ORTHO05D003659 8.7e-15 83.2 63 65.1
HPP92_003874 Vanilla planifolia HOM05D003037 ORTHO05D003659 8.7e-15 83.2 63 60.3
HPP92_003892 Vanilla planifolia HOM05D003037 ORTHO05D003659 8.7e-15 83.2 63 60.3
QL02p100083 Quercus lobata HOM05D003037 ORTHO05D003659 1.5e-14 82.4 79 53.2
RcHm_v2.0_Chr1g0321261 Rosa chinensis HOM05D003037 ORTHO05D003659 1.6e-13 79.0 60 61.7
MBI04_g26974_MAGBIO Magnolia biondii HOM05D003037 ORTHO05D003659 2.8e-13 78.2 63 65.1
Os03g0134300 Oryza sativa ssp. japonica HOM05D003037 ORTHO05D003659 6.2e-13 77.0 63 57.1
Pp3c22_160 Physcomitrium patens HOM05D003037 ORTHO05D003659 3.1e-12 74.7 63 50.8
Lalb_Chr25g0278781 Lupinus albus HOM05D003037 ORTHO05D003659 6.9e-12 73.6 63 61.9
Pp3c18_12130 Physcomitrium patens HOM05D003037 ORTHO05D003659 6.9e-12 73.6 63 52.4
CSS0016888 Camellia sinensis var. sinensis HOM05D003037 ORTHO05D003659 1.5e-11 72.4 57 61.4
CSS0026106 Camellia sinensis var. sinensis HOM05D003037 ORTHO05D003659 1.5e-11 72.4 57 61.4
CSS0041741 Camellia sinensis var. sinensis HOM05D003037 ORTHO05D003659 1.5e-11 72.4 57 61.4
CSS0046523 Camellia sinensis var. sinensis HOM05D003037 ORTHO05D003659 1.5e-11 72.4 57 61.4
BraA03t15703Z Brassica rapa HOM05D003037 ORTHO05D003659 7.6e-11 70.1 51 62.7
Oeu000128.2 Olea europaea HOM05D003037 ORTHO05D003659 9.9e-11 69.7 44 72.7
SEGI_05755 Sequoiadendron giganteum HOM05D003037 ORTHO05D003659 2.9e-10 68.2 62 48.4
C04p26910 Brassica napus HOM05D003037 ORTHO05D003659 3.8e-10 67.8 45 66.7
arahy.Tifrunner.gnm1.ann1.XCRF9Z Arachis hypogaea HOM05D003037 ORTHO05D003659 6.4e-10 67.0 38 84.2
A03p66520 Brassica napus HOM05D003037 ORTHO05D003659 6.4e-10 67.0 43 69.8
CSS0017565 Camellia sinensis var. sinensis HOM05D003037 ORTHO05D003659 6.4e-10 67.0 58 56.9
Mapoly0157s0018 Marchantia polymorpha HOM05D003037 ORTHO05D003659 8.4e-10 66.6 63 46.0
arahy.Tifrunner.gnm1.ann1.4H8VJF Arachis hypogaea HOM05D003037 ORTHO05D003659 1.1e-09 66.2 63 60.3
CSS0001224 Camellia sinensis var. sinensis HOM05D003037 ORTHO05D003659 1.1e-09 66.2 57 56.1
arahy.Tifrunner.gnm1.ann1.XPYE9K Arachis hypogaea HOM05D003037 ORTHO05D001609 2.4e-09 65.1 61 60.7
Oeu036681.1 Olea europaea HOM05D003037 ORTHO05D003659 4.2e-09 64.3 43 65.1
RcHm_v2.0_Chr1g0321241 Rosa chinensis HOM05D003037 ORTHO05D003659 7.1e-09 63.5 44 65.9
SMO146G0343 Selaginella moellendorffii HOM05D003037 ORTHO05D003659 9.3e-09 63.2 65 47.7
Thecc.02G025100 Theobroma cacao HOM05D003037 ORTHO05D003659 9.3e-09 63.2 42 66.7
RcHm_v2.0_Chr6g0256771 Rosa chinensis HOM05D003037 ORTHO05D003659 1.2e-08 62.8 64 46.9
RcHm_v2.0_Chr6g0258031 Rosa chinensis HOM05D003037 ORTHO05D003659 1.2e-08 62.8 64 46.9
RcHm_v2.0_Chr1g0321211 Rosa chinensis HOM05D003037 ORTHO05D003659 1.3e-07 59.3 43 60.5
Aqoxy6G01978 Aquilegia oxysepala HOM05D003037 ORTHO05D003659 3.0e-07 58.2 36 66.7
Rhsim09G0011300 Rhododendron simsii HOM05D003037 ORTHO05D003659 3.9e-07 57.8 46 56.5
Aqoxy6G01963 Aquilegia oxysepala HOM05D003037 ORTHO05D003659 6.7e-07 57.0 35 68.6
CBR_g16944 Chara braunii HOM05D003037 ORTHO05D003659 8.7e-07 56.6 52 51.9
arahy.Tifrunner.gnm1.ann1.09CWRL Arachis hypogaea HOM05D003037 ORTHO05D003659 7.4e-06 53.5 44 65.9


User provided reference genes

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