Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.538Z4G Arachis hypogaea HOM05D007184 ORTHO05D008987 4.9e-126 454.5 238 100.0
Medtr2g082930 Medicago truncatula HOM05D007184 ORTHO05D008987 3.0e-67 259.2 241 63.9
TPR.G36807 Trifolium pratense HOM05D007184 ORTHO05D008987 6.8e-67 258.1 241 66.4
Lj3g0025244 Lotus japonicus HOM05D007184 ORTHO05D008987 3.1e-64 249.2 244 63.1
Ca_01753_v3 Cicer arietinum L. HOM05D007184 ORTHO05D008987 1.6e-63 246.9 242 64.0
Psat5g251800 Pisum sativum HOM05D007184 ORTHO05D008987 1.6e-63 246.9 242 62.0
Phvul.005G091600 Phaseolus vulgaris HOM05D007184 ORTHO05D008987 4.5e-63 245.4 243 63.8
Glyma.12G214300 Glycine max HOM05D007184 ORTHO05D008987 5.9e-63 245.0 242 63.2
Glyma.13G287300 Glycine max HOM05D007184 ORTHO05D008987 5.9e-63 245.0 246 62.2
Gorai.013G163800 Gossypium raimondii HOM05D007184 ORTHO05D008987 1.0e-62 244.2 240 61.7
COL.COLO4_09571 Corchorus olitorius HOM05D007184 ORTHO05D008987 1.3e-62 243.8 201 68.7
MELO3C016627.2 Cucumis melo HOM05D007184 ORTHO05D008987 1.3e-62 243.8 214 67.3
Gohir.A13G141300 Gossypium hirsutum HOM05D007184 ORTHO05D008987 1.7e-62 243.4 240 61.7
Gohir.D13G146000 Gossypium hirsutum HOM05D007184 ORTHO05D008987 3.8e-62 242.3 240 61.2
VMungo1080G0323 Vigna mungo HOM05D007184 ORTHO05D008987 3.8e-62 242.3 240 62.9
Thecc.07G052800 Theobroma cacao HOM05D007184 ORTHO05D008987 5.0e-62 241.9 241 60.6
AUR62015645 Chenopodium quinoa HOM05D007184 ORTHO05D008987 1.5e-61 240.4 245 61.2
ClCG10G005800 Citrullus lanatus HOM05D007184 ORTHO05D008987 3.3e-61 239.2 170 77.1
Cfa020415 Carpinus fangiana HOM05D007184 ORTHO05D008987 7.3e-61 238.0 241 60.2
AUR62020554 Chenopodium quinoa HOM05D007184 ORTHO05D008987 1.2e-60 237.3 245 60.8
CiPaw.11G183700 Carya illinoinensis HOM05D007184 ORTHO05D008987 2.1e-60 236.5 240 60.0
CsaV3_3G005480 Cucumis sativus L. HOM05D007184 ORTHO05D008987 2.1e-60 236.5 214 65.4
Duzib268G1070 Durio zibethinus HOM05D007184 ORTHO05D008987 5.2e-59 231.9 216 63.4
Lalb_Chr14g0366141 Lupinus albus HOM05D007184 ORTHO05D008987 6.8e-59 231.5 237 61.2
Hma1.2p1_1869F.1_g306030 Hydrangea macrophylla HOM05D007184 ORTHO05D008987 1.2e-58 230.7 243 57.6
Manes.03G122800 Manihot esculenta HOM05D007184 ORTHO05D008987 2.6e-58 229.6 238 61.3
QL08p013467 Quercus lobata HOM05D007184 ORTHO05D008987 3.4e-58 229.2 194 65.5
QL08p013337 Quercus lobata HOM05D007184 ORTHO05D008987 4.4e-58 228.8 239 59.0
CSS0032425 Camellia sinensis var. sinensis HOM05D007184 ORTHO05D008987 5.8e-58 228.4 242 57.4
CSS0036378 Camellia sinensis var. sinensis HOM05D007184 ORTHO05D008987 5.8e-58 228.4 242 57.4
Potri.011G132900 Populus trichocarpa HOM05D007184 ORTHO05D008987 1.3e-57 227.3 242 58.3
PGR031G2970 Punica granatum HOM05D007184 ORTHO05D008987 2.2e-57 226.5 217 61.8
Nitab4.5_0000397g0060 Nicotiana tabacum HOM05D007184 ORTHO05D008987 3.7e-57 225.7 238 57.6
Cpa.g.sc97.69 Carica papaya HOM05D007184 ORTHO05D008987 4.9e-57 225.3 149 81.9
RcHm_v2.0_Chr4g0410121 Rosa chinensis HOM05D007184 ORTHO05D008987 6.4e-57 224.9 241 58.1
EL10Ac4g07971 Beta vulgaris HOM05D007184 ORTHO05D008987 1.1e-56 224.2 239 58.6
Cc05_g13240 Coffea canephora HOM05D007184 ORTHO05D008987 3.2e-56 222.6 197 64.5
Oeu062614.1 Olea europaea HOM05D007184 ORTHO05D008987 3.2e-56 222.6 241 58.5
Sabra11G0119700 Salix brachista HOM05D007184 ORTHO05D008987 5.4e-56 221.9 246 58.1
RcHm_v2.0_Chr5g0037571 Rosa chinensis HOM05D007184 ORTHO05D008987 7.0e-56 221.5 241 58.1
BcaB07g33556 Brassica carinata HOM05D007184 ORTHO05D008987 1.2e-55 220.7 186 69.4
Solyc07g064100.1 Solanum lycopersicum HOM05D007184 ORTHO05D008987 1.6e-55 220.3 201 63.7
Sopen07g032240 Solanum pennellii HOM05D007184 ORTHO05D008987 1.6e-55 220.3 201 63.7
A06p02680 Brassica napus HOM05D007184 ORTHO05D008987 2.0e-55 219.9 160 76.9
Nitab4.5_0009192g0030 Nicotiana tabacum HOM05D007184 ORTHO05D008987 2.0e-55 219.9 240 57.1
BraA06t23477Z Brassica rapa HOM05D007184 ORTHO05D008987 2.7e-55 219.5 160 76.9
Prupe.4G202500 Prunus persica HOM05D007184 ORTHO05D008987 2.7e-55 219.5 244 57.8
PGSC0003DMG400019260 Solanum tuberosum HOM05D007184 ORTHO05D008987 2.7e-55 219.5 217 60.4
THA.LOC104817896 Tarenaya hassleriana HOM05D007184 ORTHO05D008987 7.8e-55 218.0 149 77.9
Ciclev10009433m.g Citrus clementina HOM05D007184 ORTHO05D008987 1.0e-54 217.6 243 57.6
Lsat_1_v5_gn_5_5700 Lactuca sativa HOM05D003993 ORTHO05D005336 1.0e-54 217.6 213 62.9
Thhalv10011779m.g Eutrema salsugineum HOM05D007184 ORTHO05D008987 1.7e-54 216.9 191 67.0
ClCG03G004100 Citrullus lanatus HOM05D007184 ORTHO05D008987 2.3e-54 216.5 170 71.8
HanXRQChr05g0159221 Helianthus annuus HOM05D007184 ORTHO05D008987 2.3e-54 216.5 180 68.9
FAN25G3727 Fragaria x ananassa HOM05D007184 ORTHO05D008987 3.0e-54 216.1 200 62.0
TAR624G0273 Trochodendron aralioides HOM05D007184 ORTHO05D008987 3.0e-54 216.1 241 54.4
AT1G51100 Arabidopsis thaliana HOM05D007184 ORTHO05D008987 3.9e-54 215.7 192 66.1
Peaxi162Scf01086g00015 Petunia axillaris HOM05D007184 ORTHO05D008987 5.0e-54 215.3 239 58.2
CANSAT11G2419 Cannabis sativa HOM05D007184 ORTHO05D008987 6.6e-54 214.9 197 63.5
Nn1g03662 Nelumbo nucifera HOM05D007184 ORTHO05D008987 6.6e-54 214.9 147 76.2
CARHR041120 Cardamine hirsuta HOM05D007184 ORTHO05D008987 1.1e-53 214.2 192 65.6
FAN21G0378 Fragaria x ananassa HOM05D007184 ORTHO05D008987 1.1e-53 214.2 231 57.6
GSVIVG01014606001 Vitis vinifera HOM05D007184 ORTHO05D008987 1.5e-53 213.8 230 57.4
BcaC08g43280 Brassica carinata HOM05D007184 ORTHO05D008987 2.5e-53 213.0 197 66.0
C06p06300 Brassica napus HOM05D007184 ORTHO05D008987 2.5e-53 213.0 197 66.0
BolC6t35739H Brassica oleracea HOM05D007184 ORTHO05D008987 2.5e-53 213.0 197 66.0
FvH4_3g21830 Fragaria vesca HOM05D007184 ORTHO05D008987 2.5e-53 213.0 231 57.1
FAN11G2616 Fragaria x ananassa HOM05D007184 ORTHO05D008987 2.5e-53 213.0 231 57.1
Sp1g37830 Schrenkiella parvula HOM05D007184 ORTHO05D008987 2.5e-53 213.0 239 60.7
Carub.0001s4001 Capsella rubella HOM05D007184 ORTHO05D008987 3.3e-53 212.6 192 66.1
MD03G1211500 Malus domestica HOM05D007184 ORTHO05D008987 3.3e-53 212.6 239 56.5
AL1G58900 Arabidopsis lyrata HOM05D007184 ORTHO05D008987 4.3e-53 212.2 192 65.6
Migut.H01857 Erythranthe guttata HOM05D007184 ORTHO05D008987 5.6e-53 211.8 197 64.0
Atru.BG.150.p Acer truncatum HOM05D007184 ORTHO05D008987 7.3e-53 211.5 163 71.2
ECA246G2094 Erigeron canadensis HOM05D003993 ORTHO05D005336 1.6e-52 210.3 199 61.8
QL08p013286 Quercus lobata HOM05D007184 ORTHO05D008987 2.3e-51 206.5 241 54.8
Haze_09610 Corylus avellana HOM05D007184 ORTHO05D008987 2.6e-50 203.0 230 55.7
TWI38G1172 Tripterygium wilfordii HOM05D007184 ORTHO05D008987 4.4e-50 202.2 229 56.3
Lj1P863T33 Lonicera japonica HOM05D007184 ORTHO05D008987 5.8e-50 201.8 180 63.3
SalBow7G0016 Salvia bowleyana HOM05D007184 ORTHO05D008987 5.8e-50 201.8 165 67.3
Aa31LG10G3410 Aethionema arabicum HOM05D006358 ORTHO05D008185 3.7e-49 199.1 184 64.7
Sed0004555 Sechium edule HOM05D007184 ORTHO05D008987 3.2e-48 196.1 197 58.4
unitig_52.g17357 Utricularia gibba HOM05D007184 ORTHO05D008987 3.2e-48 196.1 168 67.9
Aqoxy4G02072 Aquilegia oxysepala HOM05D007184 ORTHO05D008987 9.2e-48 194.5 237 54.9
CDE05G0960 Ceratophyllum demersum HOM05D007184 ORTHO05D008987 5.1e-46 188.7 128 77.3
MBI12_g14496_MAGBIO Magnolia biondii HOM05D007184 ORTHO05D008987 3.3e-45 186.0 151 65.6
PSO541G2827 Papaver somniferum HOM05D007184 ORTHO05D008987 5.6e-45 185.3 239 54.0
PSO675G5359 Papaver somniferum HOM05D007184 ORTHO05D008987 9.5e-45 184.5 240 53.8
CDE11G0483 Ceratophyllum demersum HOM05D007184 ORTHO05D008987 1.2e-44 184.1 151 66.9
ATR0073G001 Amborella trichopoda HOM05D007184 ORTHO05D008987 3.4e-42 176.0 150 62.7
QL08p013784 Quercus lobata HOM05D007184 ORTHO05D008987 1.2e-39 167.5 246 49.6
Eucgr.F03426 Eucalyptus grandis HOM05D007184 ORTHO05D008987 4.6e-39 165.6 118 75.4
Os01g0676200 Oryza sativa ssp. japonica HOM05D007184 ORTHO05D008987 4.6e-39 165.6 149 60.4
Zm00001eb156870 Zea mays HOM05D007184 ORTHO05D008987 1.3e-38 164.1 181 52.5
DCAR_010017 Daucus carota HOM05D007184 ORTHO05D008987 6.6e-38 161.8 107 81.3
EL10Ac1g02068 Beta vulgaris HOM05D007184 ORTHO05D008987 1.6e-31 140.6 115 64.3
QL08p060543 Quercus lobata HOM05D000807 ORTHO05D008987 1.1e-29 134.4 82 87.8
QL08p060183 Quercus lobata HOM05D000807 ORTHO05D008987 7.3e-29 131.7 82 86.6
Potri.001G417350 Populus trichocarpa HOM05D007184 ORTHO05D008987 3.0e-22 109.8 73 80.8
Nn1g08505 Nelumbo nucifera HOM05D007184 ORTHO05D008987 1.6e-20 104.0 93 59.1
SEGI_35792 Sequoiadendron giganteum HOM05D007184 ORTHO05D008987 3.6e-20 102.8 126 46.0
BcaB07g33555 Brassica carinata HOM05D007184 ORTHO05D008987 4.0e-19 99.4 111 54.1
Sc03g0008930 Simmondsia chinensis HOM05D007184 ORTHO05D008987 2.2e-17 93.6 105 55.2
Lju3590C0T1 Lonicera japonica HOM05D007184 ORTHO05D008987 4.2e-16 89.4 59 81.4
Thhalv10012149m.g Eutrema salsugineum HOM05D007184 ORTHO05D008987 7.9e-15 85.1 92 55.4
Pp3c11_19690 Physcomitrium patens HOM05D007184 ORTHO05D008987 2.6e-10 70.1 111 37.8
FvH4_7g08050 Fragaria vesca HOM05D007184 ORTHO05D008987 4.5e-10 69.3 46 78.3
FAN01G2498 Fragaria x ananassa HOM05D007184 ORTHO05D008987 4.5e-10 69.3 46 78.3
CBR_g19283 Chara braunii HOM05D007184 ORTHO05D008987 9.3e-08 61.6 98 35.7
Mapoly0032s0044 Marchantia polymorpha HOM05D007184 ORTHO05D008987 1.2e-07 61.2 103 40.8


User provided reference genes

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