Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.52W323 Arachis hypogaea HOM05D003642 ORTHO05D004460 5.6e-81 304.3 161 100.0
arahy.Tifrunner.gnm1.ann1.GDD8RQ Arachis hypogaea HOM05D003642 ORTHO05D004460 2.3e-66 255.8 141 97.9
arahy.Tifrunner.gnm1.ann1.U1TIAA Arachis hypogaea HOM05D003642 ORTHO05D004460 1.5e-65 253.1 141 86.5
arahy.Tifrunner.gnm1.ann1.SR1X9W Arachis hypogaea HOM05D003642 ORTHO05D004460 2.5e-65 252.3 141 87.2
VMungo1127G0822 Vigna mungo HOM05D003642 ORTHO05D004460 2.7e-59 232.3 141 78.0
Phvul.011G093000 Phaseolus vulgaris HOM05D003642 ORTHO05D004460 3.5e-59 231.9 141 77.3
Lalb_Chr03g0028031 Lupinus albus HOM05D003642 ORTHO05D004460 1.3e-58 229.9 141 76.6
TPR.G17216 Trifolium pratense HOM05D003642 ORTHO05D004460 3.9e-58 228.4 141 74.5
Glyma.12G088200 Glycine max HOM05D003642 ORTHO05D004460 5.1e-58 228.0 141 75.9
Lj3g0020685 Lotus japonicus HOM05D003642 ORTHO05D004460 5.1e-58 228.0 141 75.9
Ca_19399_v3 Cicer arietinum L. HOM05D003642 ORTHO05D004460 3.3e-57 225.3 141 75.2
Glyma.11G184200 Glycine max HOM05D003642 ORTHO05D004460 3.3e-57 225.3 141 75.9
Psat7g189000 Pisum sativum HOM05D003642 ORTHO05D004460 5.6e-57 224.6 141 73.8
Medtr4g053520 Medicago truncatula HOM05D003642 ORTHO05D004460 1.3e-56 223.4 141 71.6
Glyma.12G088100 Glycine max HOM05D003642 ORTHO05D004460 6.2e-56 221.1 140 74.3
Atru.chr3.3290 Acer truncatum HOM05D003642 ORTHO05D004460 1.4e-55 219.9 141 70.2
Prupe.6G127500 Prunus persica HOM05D003642 ORTHO05D004460 6.9e-55 217.6 141 69.5
Haze_23398 Corylus avellana HOM05D003642 ORTHO05D004460 1.5e-54 216.5 141 70.2
Cfa010037 Carpinus fangiana HOM05D003642 ORTHO05D004460 7.6e-54 214.2 141 68.8
Hma1.2p1_0305F.1_g119710 Hydrangea macrophylla HOM05D003642 ORTHO05D004460 7.6e-54 214.2 141 68.8
Hma1.2p1_0305F.1_g119720 Hydrangea macrophylla HOM05D003642 ORTHO05D004460 7.6e-54 214.2 141 68.8
Hma1.2p1_0578F.1_g182375 Hydrangea macrophylla HOM05D003642 ORTHO05D004460 7.6e-54 214.2 141 68.8
Nitab4.5_0005324g0040 Nicotiana tabacum HOM05D003642 ORTHO05D004460 1.3e-53 213.4 141 70.2
MD03G1142400 Malus domestica HOM05D003642 ORTHO05D004460 1.7e-53 213.0 141 68.8
COL.COLO4_19910 Corchorus olitorius HOM05D003642 ORTHO05D004460 2.2e-53 212.6 141 67.4
Thecc.09G285800 Theobroma cacao HOM05D003642 ORTHO05D004460 2.2e-53 212.6 141 68.8
Duzib170G0814 Durio zibethinus HOM05D003642 ORTHO05D004460 3.8e-53 211.8 141 68.8
CiPaw.13G137400 Carya illinoinensis HOM05D003642 ORTHO05D004460 4.9e-53 211.5 141 69.5
Potri.009G144000 Populus trichocarpa HOM05D003642 ORTHO05D004460 4.9e-53 211.5 140 69.3
Nitab4.5_0002002g0040 Nicotiana tabacum HOM05D003642 ORTHO05D004460 6.4e-53 211.1 141 69.5
Gohir.D07G113300 Gossypium hirsutum HOM05D003642 ORTHO05D004460 8.4e-53 210.7 141 68.8
Ciclev10028611m.g Citrus clementina HOM05D003642 ORTHO05D004460 1.1e-52 210.3 141 67.4
PGSC0003DMG400007143 Solanum tuberosum HOM05D003642 ORTHO05D004460 1.1e-52 210.3 141 69.5
Manes.11G160800 Manihot esculenta HOM05D003642 ORTHO05D004460 1.4e-52 209.9 141 66.7
Potri.004G184200 Populus trichocarpa HOM05D003642 ORTHO05D004460 1.4e-52 209.9 140 67.9
Gohir.A05G081500 Gossypium hirsutum HOM05D003642 ORTHO05D004460 2.4e-52 209.1 141 68.8
CAN.G919.22 Capsicum annuum HOM05D003642 ORTHO05D004460 3.2e-52 208.8 141 68.8
FAN21G1092 Fragaria x ananassa HOM05D003642 ORTHO05D004460 3.2e-52 208.8 141 68.8
FAN25G1659 Fragaria x ananassa HOM05D003642 ORTHO05D004460 3.2e-52 208.8 141 68.8
Gohir.A07G109500 Gossypium hirsutum HOM05D003642 ORTHO05D004460 3.2e-52 208.8 141 68.1
Sabra04G0123900 Salix brachista HOM05D003642 ORTHO05D004460 3.2e-52 208.8 140 67.9
Sopen06g030830 Solanum pennellii HOM05D003642 ORTHO05D004460 3.2e-52 208.8 141 68.8
Gorai.004G009500 Gossypium raimondii HOM05D003642 ORTHO05D004460 4.2e-52 208.4 141 68.1
Manes.04G004900 Manihot esculenta HOM05D003642 ORTHO05D004460 4.2e-52 208.4 141 67.4
Gorai.009G086400 Gossypium raimondii HOM05D003642 ORTHO05D004460 5.4e-52 208.0 141 68.1
Gohir.A08G004800 Gossypium hirsutum HOM05D003642 ORTHO05D004460 7.1e-52 207.6 141 69.5
Gohir.D05G084500 Gossypium hirsutum HOM05D003642 ORTHO05D004460 7.1e-52 207.6 141 68.1
Duzib150G1635 Durio zibethinus HOM05D003642 ORTHO05D004460 9.3e-52 207.2 140 66.4
Lj1A233T8 Lonicera japonica HOM05D003642 ORTHO05D004460 9.3e-52 207.2 141 67.4
Nn2g14115 Nelumbo nucifera HOM05D003642 ORTHO05D004460 9.3e-52 207.2 137 69.3
Gorai.001G121600 Gossypium raimondii HOM05D003642 ORTHO05D004460 1.2e-51 206.8 141 68.1
Actinidia07238 Actinidia chinensis HOM05D003642 ORTHO05D004460 1.6e-51 206.5 141 67.4
HanXRQChr01g0024131 Helianthus annuus HOM05D003642 ORTHO05D004460 1.6e-51 206.5 141 65.2
Nn6g34944 Nelumbo nucifera HOM05D003642 ORTHO05D004460 1.6e-51 206.5 141 67.4
Solyc06g074370.3 Solanum lycopersicum HOM05D003642 ORTHO05D004460 1.6e-51 206.5 141 68.1
MD11G1162900 Malus domestica HOM05D003642 ORTHO05D004460 2.1e-51 206.1 141 66.0
MELO3C021417.2 Cucumis melo HOM05D003642 ORTHO05D004460 2.7e-51 205.7 141 66.7
CsaV3_6G015050 Cucumis sativus L. HOM05D003642 ORTHO05D004460 2.7e-51 205.7 141 66.7
Peaxi162Scf00091g00013 Petunia axillaris HOM05D003642 ORTHO05D004460 4.6e-51 204.9 141 65.2
ClCG02G022190 Citrullus lanatus HOM05D003642 ORTHO05D004460 6.0e-51 204.5 141 66.7
FAN16G3636 Fragaria x ananassa HOM05D003642 ORTHO05D004460 7.9e-51 204.1 141 67.4
ECA248G0168 Erigeron canadensis HOM05D003642 ORTHO05D002466 1.8e-50 203.0 141 64.5
PGR102G1012 Punica granatum HOM05D003642 ORTHO05D004460 1.8e-50 203.0 141 66.0
Aqoxy2G01228 Aquilegia oxysepala HOM05D003642 ORTHO05D004460 3.0e-50 202.2 141 64.5
QL01p012516 Quercus lobata HOM05D003642 ORTHO05D004460 3.9e-50 201.8 143 63.6
RcHm_v2.0_Chr5g0044221 Rosa chinensis HOM05D003642 ORTHO05D004460 3.9e-50 201.8 141 66.7
Sabra09G0111700 Salix brachista HOM05D003642 ORTHO05D004460 3.9e-50 201.8 140 67.1
Sabra09G0114400 Salix brachista HOM05D003642 ORTHO05D004460 3.9e-50 201.8 140 67.1
TWI31G0358 Tripterygium wilfordii HOM05D003642 ORTHO05D004460 3.9e-50 201.8 141 66.0
Oeu002383.1 Olea europaea HOM05D003642 ORTHO05D004460 6.7e-50 201.1 141 63.8
TAR369G0931 Trochodendron aralioides HOM05D003642 ORTHO05D004460 6.7e-50 201.1 141 66.0
Sed0019020 Sechium edule HOM05D003642 ORTHO05D004460 1.1e-49 200.3 141 64.5
SGA_v2.0_scaffold22G09875 Striga asiatica HOM05D003642 ORTHO05D004460 1.9e-49 199.5 141 65.2
Migut.D02354 Erythranthe guttata HOM05D003642 ORTHO05D004460 2.5e-49 199.1 141 63.8
Glyma.12G088000 Glycine max HOM05D003642 ORTHO05D004460 3.3e-49 198.7 145 65.5
vmacro03309 Vaccinium macrocarpon HOM05D003642 ORTHO05D004460 3.3e-49 198.7 141 64.5
THA.LOC104826418 Tarenaya hassleriana HOM05D003642 ORTHO05D004460 4.3e-49 198.4 141 64.5
Ah.08g215830 Amaranthus hybridus HOM05D003642 ORTHO05D004460 5.6e-49 198.0 141 63.8
SGA_v2.0_scaffold147G36369 Striga asiatica HOM05D003642 ORTHO05D004460 5.6e-49 198.0 141 65.2
TAR369G0447 Trochodendron aralioides HOM05D003642 ORTHO05D004460 5.6e-49 198.0 141 66.7
THA.LOC104800538 Tarenaya hassleriana HOM05D003642 ORTHO05D004460 7.4e-49 197.6 141 63.1
AUR62009777 Chenopodium quinoa HOM05D003642 ORTHO05D004460 9.6e-49 197.2 141 61.0
MBI17_g01557_MAGBIO Magnolia biondii HOM05D003642 ORTHO05D004460 9.6e-49 197.2 142 65.5
EL10Ac7g15808 Beta vulgaris HOM05D003642 ORTHO05D004460 1.6e-48 196.4 141 63.1
CDE06G1048 Ceratophyllum demersum HOM05D003642 ORTHO05D004460 1.6e-48 196.4 141 62.4
Cc01_g09370 Coffea canephora HOM05D003642 ORTHO05D004460 1.6e-48 196.4 140 65.7
CANSAT54G0701 Cannabis sativa HOM05D003642 ORTHO05D004460 2.8e-48 195.7 142 66.2
CDE08G0849 Ceratophyllum demersum HOM05D003642 ORTHO05D004460 2.8e-48 195.7 142 62.0
AUR62039222 Chenopodium quinoa HOM05D003642 ORTHO05D004460 3.7e-48 195.3 141 61.0
HanXRQChr11g0346801 Helianthus annuus HOM05D003642 ORTHO05D004460 3.7e-48 195.3 141 63.8
PSO384G4986 Papaver somniferum HOM05D003642 ORTHO05D004460 3.7e-48 195.3 141 62.4
TAR623G1689 Trochodendron aralioides HOM05D003642 ORTHO05D004460 4.8e-48 194.9 140 65.7
Actinidia24206 Actinidia chinensis HOM05D003642 ORTHO05D004460 6.2e-48 194.5 126 70.6
FvH4_3g24660 Fragaria vesca HOM05D003642 ORTHO05D004460 6.2e-48 194.5 130 69.2
SEGI_33073 Sequoiadendron giganteum HOM05D003642 ORTHO05D004460 8.1e-48 194.1 142 65.5
DCAR_012184 Daucus carota HOM05D003642 ORTHO05D004460 1.4e-47 193.4 140 60.7
Rhsim13G0110400 Rhododendron simsii HOM05D003642 ORTHO05D004460 1.4e-47 193.4 141 61.0
HPP92_006804 Vanilla planifolia HOM05D003642 ORTHO05D004460 1.4e-47 193.4 142 64.1
ATR0820G225 Amborella trichopoda HOM05D003642 ORTHO05D004460 1.8e-47 193.0 142 62.7
FAN11G1888 Fragaria x ananassa HOM05D003642 ORTHO05D004460 4.0e-47 191.8 126 70.6
Lsat_1_v5_gn_1_61681 Lactuca sativa HOM05D003642 ORTHO05D004460 6.9e-47 191.0 140 61.4
MBI01_g03598_MAGBIO Magnolia biondii HOM05D003642 ORTHO05D004460 6.9e-47 191.0 142 63.4
Dinv29465 Davidia involucrata HOM05D003642 ORTHO05D004460 9.0e-47 190.7 126 69.8
Eucgr.B03872 Eucalyptus grandis HOM05D003642 ORTHO05D004460 1.2e-46 190.3 141 63.1
MSTRG.18752 Avicennia marina HOM05D003642 ORTHO05D004460 1.5e-46 189.9 143 62.2
CDE02G0744 Ceratophyllum demersum HOM05D003642 ORTHO05D004460 1.5e-46 189.9 141 61.7
vmacro03308 Vaccinium macrocarpon HOM05D003642 ORTHO05D004460 3.4e-46 188.7 141 61.7
Eucgr.B03871 Eucalyptus grandis HOM05D003642 ORTHO05D004460 4.5e-46 188.3 136 62.5
PSO210G3660 Papaver somniferum HOM05D003642 ORTHO05D004460 4.5e-46 188.3 140 62.1
SalBow6G1534 Salvia bowleyana HOM05D003642 ORTHO05D004460 4.5e-46 188.3 142 61.3
arahy.Tifrunner.gnm1.ann1.H74NZW Arachis hypogaea HOM05D003642 ORTHO05D004460 9.9e-46 187.2 144 62.5
Sc12g0004420 Simmondsia chinensis HOM05D003642 ORTHO05D004460 9.9e-46 187.2 141 59.6
Lsat_1_v5_gn_6_40461 Lactuca sativa HOM05D003642 ORTHO05D004460 1.7e-45 186.4 141 58.9
vmacro03307 Vaccinium macrocarpon HOM05D003642 ORTHO05D004460 1.1e-44 183.7 147 59.9
unitig_0.g1479 Utricularia gibba HOM05D003642 ORTHO05D004460 1.4e-44 183.3 140 60.7
HPP92_025134 Vanilla planifolia HOM05D003642 ORTHO05D004460 1.9e-44 183.0 126 68.3
HPP92_026090 Vanilla planifolia HOM05D003642 ORTHO05D004460 1.9e-44 183.0 126 68.3
HPP92_011490 Vanilla planifolia HOM05D003642 ORTHO05D004460 5.5e-44 181.4 142 61.3
CSS0027733 Camellia sinensis var. sinensis HOM05D003642 ORTHO05D004460 7.1e-44 181.0 140 62.1
CSS0037628 Camellia sinensis var. sinensis HOM05D003642 ORTHO05D004460 7.1e-44 181.0 140 62.1
CSS0018533 Camellia sinensis var. sinensis HOM05D003642 ORTHO05D004460 1.2e-43 180.3 140 62.9
ECA233G1545 Erigeron canadensis HOM05D003642 ORTHO05D004460 6.0e-43 177.9 140 56.4
HanXRQChr12g0364601 Helianthus annuus HOM05D003642 ORTHO05D004460 6.0e-43 177.9 140 59.3
Sp1g06910 Schrenkiella parvula HOM05D003642 ORTHO05D004460 2.3e-42 176.0 144 55.6
Os01g0858900 Oryza sativa ssp. japonica HOM05D003642 ORTHO05D004460 3.0e-42 175.6 146 56.8
Thhalv10007826m.g Eutrema salsugineum HOM05D003642 ORTHO05D004460 3.9e-42 175.3 141 57.4
AT1G08280 Arabidopsis thaliana HOM05D003642 ORTHO05D004460 6.7e-42 174.5 141 56.7
Carub.0001s0763 Capsella rubella HOM05D003642 ORTHO05D004460 6.7e-42 174.5 141 56.0
BraA06t23738Z Brassica rapa HOM05D003642 ORTHO05D004460 8.7e-42 174.1 144 55.6
CARHR008130 Cardamine hirsuta HOM05D003642 ORTHO05D004460 8.7e-42 174.1 141 56.7
A06p05300 Brassica napus HOM05D003642 ORTHO05D004460 1.5e-41 173.3 144 54.9
Zm00001eb147290 Zea mays HOM05D003642 ORTHO05D004460 1.5e-41 173.3 146 55.5
AL1G18680 Arabidopsis lyrata HOM05D003642 ORTHO05D004460 1.9e-41 172.9 141 56.0
BcaB07g34070 Brassica carinata HOM05D003642 ORTHO05D004460 4.3e-41 171.8 144 54.9
BcaB07g34071 Brassica carinata HOM05D003642 ORTHO05D004460 7.4e-41 171.0 144 54.2
C05p06380 Brassica napus HOM05D003642 ORTHO05D004460 7.4e-41 171.0 144 54.2
BolC5t29393H Brassica oleracea HOM05D003642 ORTHO05D004460 7.4e-41 171.0 144 54.2
Zm00001eb366950 Zea mays HOM05D003642 ORTHO05D004460 7.4e-41 171.0 146 54.1
unitig_746.g26606 Utricularia gibba HOM05D003642 ORTHO05D004460 9.6e-41 170.6 140 55.0
TWI75G1212 Tripterygium wilfordii HOM05D003642 ORTHO05D004460 1.6e-40 169.9 141 56.0
Rhsim13G0110200 Rhododendron simsii HOM05D003642 ORTHO05D004460 2.8e-40 169.1 144 56.2
SMO145G0137 Selaginella moellendorffii HOM05D003642 ORTHO05D004460 3.1e-39 165.6 143 53.8
Zm00001eb077930 Zea mays HOM05D003642 ORTHO05D004460 6.9e-39 164.5 141 52.5
Os04g0506800 Oryza sativa ssp. japonica HOM05D003642 ORTHO05D004460 1.0e-37 160.6 154 50.0
Zm00001eb426190 Zea mays HOM05D003642 ORTHO05D004460 1.3e-37 160.2 146 51.4
Zm00001eb196980 Zea mays HOM05D003642 ORTHO05D004460 2.9e-37 159.1 149 52.3
Os12g0151500 Oryza sativa ssp. japonica HOM05D003642 ORTHO05D004460 3.2e-36 155.6 147 53.1
unitig_899.g15371 Utricularia gibba HOM05D003642 ORTHO05D004460 3.2e-36 155.6 140 52.1
Mapoly0005s0249 Marchantia polymorpha HOM05D003642 ORTHO05D004460 7.1e-36 154.5 142 54.9
PSO339G5820 Papaver somniferum HOM05D003642 ORTHO05D004460 1.6e-35 153.3 116 61.2
Mapoly0001s0264 Marchantia polymorpha HOM05D003642 ORTHO05D004460 1.3e-34 150.2 146 50.0
SMO331G0026 Selaginella moellendorffii HOM05D003642 ORTHO05D004460 6.7e-34 147.9 148 50.7
AagrBONN_evm.TU.Sc2ySwM_228.2668 Anthoceros agrestis HOM05D003642 ORTHO05D004460 1.8e-31 139.8 142 46.5
Gohir.D08G015066 Gossypium hirsutum HOM05D003642 ORTHO05D004460 5.3e-31 138.3 102 63.7
Zm00001eb092710 Zea mays HOM05D003642 ORTHO05D004460 1.2e-30 137.1 151 49.7
Lj1A242T18 Lonicera japonica HOM05D003642 ORTHO05D004460 1.0e-29 134.0 97 66.0
CiPaw.14G101500 Carya illinoinensis HOM05D003642 ORTHO05D004460 9.3e-28 127.5 141 47.5
Cpa.g.sc32.97 Carica papaya HOM05D003642 ORTHO05D004460 1.6e-27 126.7 94 61.7
CAN.G225.12 Capsicum annuum HOM05D003642 ORTHO05D004460 1.1e-25 120.6 87 66.7
Pp3c14_26500 Physcomitrium patens HOM05D003642 ORTHO05D004460 2.5e-25 119.4 147 44.9
CDE06G0775 Ceratophyllum demersum HOM05D003642 ORTHO05D004460 3.7e-24 115.5 94 58.5
Mapoly0032s0065 Marchantia polymorpha HOM05D003642 ORTHO05D004460 8.2e-24 114.4 146 39.0
Mapoly0028s0144 Marchantia polymorpha HOM05D003642 ORTHO05D004460 3.8e-21 105.5 153 37.9
unitig_899.g15372 Utricularia gibba HOM05D003642 ORTHO05D004460 2.7e-19 99.4 71 63.4
GSVIVG01036150001 Vitis vinifera HOM05D003642 ORTHO05D004460 1.7e-16 90.1 76 59.2
Lalb_Chr19g0136571 Lupinus albus HOM05D003642 ORTHO05D004460 8.2e-16 87.8 52 75.0
CDE08G1668 Ceratophyllum demersum HOM05D003642 ORTHO05D003759 9.4e-12 74.3 129 35.7
Lj2C980T3 Lonicera japonica HOM05D003642 ORTHO05D004460 1.6e-11 73.6 68 54.4
Pp3c6_3550 Physcomitrium patens HOM05D003642 ORTHO05D004460 7.0e-07 58.2 69 44.9


User provided reference genes

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