Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.51BCJ8 Arachis hypogaea HOM05D006565 ORTHO05D008717 1.2e-197 693.0 346 100.0
arahy.Tifrunner.gnm1.ann1.V0HLME Arachis hypogaea HOM05D006565 ORTHO05D008717 5.6e-195 684.1 346 98.6
Lj5g0019410 Lotus japonicus HOM05D006565 ORTHO05D008717 3.4e-160 568.5 346 83.2
Glyma.20G195000 Glycine max HOM05D006565 ORTHO05D008717 8.7e-156 553.9 344 80.5
Lalb_Chr06g0169851 Lupinus albus HOM05D006565 ORTHO05D008717 2.8e-154 548.9 350 80.6
Ca_10426_v3 Cicer arietinum L. HOM05D006565 ORTHO05D008717 1.3e-151 540.0 343 79.0
TPR.G10259 Trifolium pratense HOM05D006565 ORTHO05D008717 6.4e-151 537.7 348 78.2
Phvul.007G137100 Phaseolus vulgaris HOM05D006565 ORTHO05D008717 2.7e-141 505.8 341 75.7
Psat6g171600 Pisum sativum HOM05D006565 ORTHO05D008717 3.5e-141 505.4 341 75.4
Medtr1g090380 Medicago truncatula HOM05D006565 ORTHO05D008717 6.0e-141 504.6 299 83.6
VMungo0720G0186 Vigna mungo HOM05D006565 ORTHO05D008717 1.9e-139 499.6 321 78.2
CiPaw.14G036000 Carya illinoinensis HOM05D006565 ORTHO05D008717 2.0e-136 489.6 341 73.0
Thecc.10G119100 Theobroma cacao HOM05D006565 ORTHO05D008717 7.6e-136 487.6 351 68.9
Ciclev10015763m.g Citrus clementina HOM05D006565 ORTHO05D008717 1.4e-134 483.4 308 75.0
QL04p048612 Quercus lobata HOM05D006565 ORTHO05D008717 2.5e-134 482.6 303 78.5
TAR636G0179 Trochodendron aralioides HOM05D006565 ORTHO05D008717 2.5e-134 482.6 350 69.7
Prupe.2G073700 Prunus persica HOM05D006565 ORTHO05D008717 6.1e-133 478.0 315 74.3
RcHm_v2.0_Chr1g0332191 Rosa chinensis HOM05D006565 ORTHO05D008717 6.1e-133 478.0 310 74.8
Potri.010G243900 Populus trichocarpa HOM05D006565 ORTHO05D008717 1.4e-132 476.9 330 72.7
Atru.chr12.1084 Acer truncatum HOM05D006565 ORTHO05D008717 1.9e-131 473.0 323 72.8
Gohir.A05G286300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 2.5e-131 472.6 354 67.5
Duzib114G0050 Durio zibethinus HOM05D006565 ORTHO05D008717 7.4e-131 471.1 300 75.3
Gohir.D05G287300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 7.4e-131 471.1 354 67.5
GSVIVG01034599001 Vitis vinifera HOM05D006565 ORTHO05D008717 1.3e-130 470.3 336 67.9
Gorai.009G302300 Gossypium raimondii HOM05D006565 ORTHO05D008717 1.7e-130 469.9 354 67.5
Manes.10G059200 Manihot esculenta HOM05D006565 ORTHO05D008717 4.8e-130 468.4 297 76.4
TWI15G0448 Tripterygium wilfordii HOM05D006565 ORTHO05D008717 1.4e-129 466.8 295 76.9
Aqoxy1G00616 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 2.4e-129 466.1 300 74.3
MD07G1062700 Malus domestica HOM05D006565 ORTHO05D008717 4.1e-129 465.3 341 69.8
Eucgr.G02667 Eucalyptus grandis HOM05D006565 ORTHO05D008717 6.9e-129 464.5 318 71.7
FvH4_7g05460 Fragaria vesca HOM05D006565 ORTHO05D008717 1.5e-128 463.4 289 76.5
Actinidia34736 Actinidia chinensis HOM05D006565 ORTHO05D008717 7.7e-128 461.1 318 71.4
ClCG05G021990 Citrullus lanatus HOM05D006565 ORTHO05D008717 1.3e-127 460.3 298 75.2
Sc07g0003130 Simmondsia chinensis HOM05D006565 ORTHO05D008717 1.9e-126 456.4 328 69.8
CANSAT56G1291 Cannabis sativa HOM05D006565 ORTHO05D008717 2.5e-126 456.1 315 72.4
MELO3C012330.2 Cucumis melo HOM05D006565 ORTHO05D008717 9.4e-126 454.1 346 67.3
Rhsim09G0140500 Rhododendron simsii HOM05D006565 ORTHO05D008717 2.7e-125 452.6 328 69.8
HanXRQChr08g0217341 Helianthus annuus HOM05D006565 ORTHO05D008717 3.6e-125 452.2 295 74.6
CsaV3_5G035170 Cucumis sativus L. HOM05D006565 ORTHO05D008717 6.1e-125 451.4 334 68.9
Cc02_g09290 Coffea canephora HOM05D006565 ORTHO05D008717 7.9e-125 451.1 292 72.6
Sabra10G0190700 Salix brachista HOM05D006565 ORTHO05D008717 7.9e-125 451.1 365 63.8
Nn2g14368 Nelumbo nucifera HOM05D006565 ORTHO05D008717 2.3e-124 449.5 292 75.3
ECA233G2794 Erigeron canadensis HOM05D006565 ORTHO05D008717 5.1e-124 448.4 295 73.2
vmacro10331 Vaccinium macrocarpon HOM05D006565 ORTHO05D008717 5.1e-124 448.4 302 73.5
HanXRQChr02g0049321 Helianthus annuus HOM05D006565 ORTHO05D008717 6.7e-124 448.0 287 75.3
Dinv03812 Davidia involucrata HOM05D006565 ORTHO05D008717 9.7e-123 444.1 297 73.7
Sed0004638 Sechium edule HOM05D006565 ORTHO05D008717 1.3e-122 443.7 327 69.4
Carub.0004s2066 Capsella rubella HOM05D006565 ORTHO05D008717 2.8e-122 442.6 323 66.9
PSO339G2240 Papaver somniferum HOM05D006565 ORTHO05D008717 1.1e-121 440.7 323 65.6
A03p21520 Brassica napus HOM05D006565 ORTHO05D008717 1.4e-121 440.3 303 69.0
THA.LOC104801973 Tarenaya hassleriana HOM05D006565 ORTHO05D008717 1.4e-121 440.3 309 69.9
Os03g0648900 Oryza sativa ssp. japonica HOM05D006565 ORTHO05D008717 1.8e-121 439.9 287 73.5
SGA_v2.0_scaffold90G27708 Striga asiatica HOM05D006565 ORTHO05D008717 6.9e-121 438.0 298 72.5
Sp4g21020 Schrenkiella parvula HOM05D006565 ORTHO05D008717 1.5e-120 436.8 336 65.8
Lj3A921T38 Lonicera japonica HOM05D006565 ORTHO05D008717 3.4e-120 435.6 279 76.7
COL.COLO4_10008 Corchorus olitorius HOM05D006565 ORTHO05D008717 4.5e-120 435.3 301 71.1
Migut.F00832 Erythranthe guttata HOM05D006565 ORTHO05D008717 5.9e-120 434.9 314 69.1
HPP92_013938 Vanilla planifolia HOM05D006565 ORTHO05D008717 1.0e-119 434.1 323 65.9
AUR62034160 Chenopodium quinoa HOM05D006565 ORTHO05D008717 6.5e-119 431.4 311 66.9
MSTRG.9025 Avicennia marina HOM05D006565 ORTHO05D008717 1.4e-118 430.3 317 66.2
CARHR133350 Cardamine hirsuta HOM05D006565 ORTHO05D008717 9.4e-118 427.6 304 67.8
Zm00001eb218510 Zea mays HOM05D006565 ORTHO05D008717 1.2e-117 427.2 291 70.1
AUR62014278 Chenopodium quinoa HOM05D006565 ORTHO05D008717 1.6e-117 426.8 338 63.9
Thhalv10016992m.g Eutrema salsugineum HOM05D006565 ORTHO05D008717 1.6e-117 426.8 302 68.9
CAN.G143.52 Capsicum annuum HOM05D006565 ORTHO05D008717 2.7e-117 426.0 336 63.4
Solyc11g006420.2 Solanum lycopersicum HOM05D006565 ORTHO05D008717 3.6e-117 425.6 333 64.0
Lsat_1_v5_gn_8_21800 Lactuca sativa HOM05D006565 ORTHO05D008717 4.7e-117 425.2 295 70.5
RhsimUnG0215000 Rhododendron simsii HOM05D006565 ORTHO05D008717 1.8e-116 423.3 387 58.9
Sopen11g002320 Solanum pennellii HOM05D006565 ORTHO05D008717 2.3e-116 422.9 294 68.7
AT2G38680 Arabidopsis thaliana HOM05D006565 ORTHO05D008717 3.9e-116 422.2 304 66.4
Dinv06042 Davidia involucrata HOM05D006565 ORTHO05D008717 5.2e-116 421.8 277 74.4
EL10Ac4g08734 Beta vulgaris HOM05D006565 ORTHO05D008717 2.6e-115 419.5 299 68.9
PGSC0003DMG400014108 Solanum tuberosum HOM05D006565 ORTHO05D008717 4.4e-115 418.7 294 67.7
Peaxi162Scf00120g01317 Petunia axillaris HOM05D006565 ORTHO05D008717 3.7e-114 415.6 329 62.6
BolC3t14938H Brassica oleracea HOM05D006565 ORTHO05D008717 2.4e-113 412.9 299 66.2
BraA03t11388Z Brassica rapa HOM05D006565 ORTHO05D008717 3.1e-113 412.5 281 70.5
C03p25510 Brassica napus HOM05D006565 ORTHO05D008717 5.9e-112 408.3 317 63.4
ATR0697G221 Amborella trichopoda HOM05D006565 ORTHO05D008717 7.7e-112 407.9 272 72.1
Hund06810 Selenicereus undatus HOM05D006565 ORTHO05D008717 5.2e-108 395.2 345 60.9
CDE06G1733 Ceratophyllum demersum HOM05D006565 ORTHO05D008717 1.8e-105 386.7 275 69.8
FAN06G1903 Fragaria x ananassa HOM05D006565 ORTHO05D008717 7.0e-105 384.8 275 71.3
SEGI_36612 Sequoiadendron giganteum HOM05D006565 ORTHO05D008717 2.0e-104 383.3 271 68.6
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 5.0e-103 378.6 330 60.9
FAN01G3085 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.1e-102 377.5 283 68.2
SMO367G1082 Selaginella moellendorffii HOM05D006565 ORTHO05D008717 1.1e-102 377.5 290 63.1
Nitab4.5_0001781g0210 Nicotiana tabacum HOM05D006565 ORTHO05D008717 1.8e-100 370.2 293 64.5
FAN10G4168 Fragaria x ananassa HOM05D006565 ORTHO05D008717 4.0e-100 369.0 300 65.0
AagrBONN_evm.TU.Sc2ySwM_228.2835 Anthoceros agrestis HOM05D006565 ORTHO05D008717 2.6e-99 366.3 318 57.9
Prupe.2G074100 Prunus persica HOM05D006565 ORTHO05D008717 1.8e-97 360.1 215 81.4
Pp3c1_24570 Physcomitrium patens HOM05D006565 ORTHO05D008717 1.0e-95 354.4 288 59.4
FAN21G0259 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.3e-95 354.0 272 66.9
Mapoly0082s0075 Marchantia polymorpha HOM05D006565 ORTHO05D008717 1.6e-93 347.1 266 61.7
AL4G35960 Arabidopsis lyrata HOM05D006565 ORTHO05D008717 1.5e-91 340.5 292 60.3
FvH4_1g27810 Fragaria vesca HOM05D006565 ORTHO05D008717 3.7e-82 309.3 269 62.5
PGSC0003DMG400001988 Solanum tuberosum HOM05D006565 ORTHO05D008717 1.3e-79 300.8 206 68.9
CBR_g36829 Chara braunii HOM05D006565 ORTHO05D001468 2.5e-78 296.6 384 43.5
Nitab4.5_0016854g0010 Nicotiana tabacum HOM05D006565 ORTHO05D008717 1.3e-71 274.2 228 63.2
MBI05_g36782_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 3.7e-66 256.1 160 77.5
Haze_03436 Corylus avellana HOM05D006565 ORTHO05D008717 4.6e-64 249.2 306 50.3
Potri.008G015201 Populus trichocarpa HOM05D006565 ORTHO05D008717 4.9e-58 229.2 140 82.1
Lj3A922G54 Lonicera japonica HOM05D006565 ORTHO05D008717 8.4e-58 228.4 146 74.0
Sabra13G0091500 Salix brachista HOM05D006565 ORTHO05D008717 1.6e-56 224.2 155 69.0
FAN10G3234 Fragaria x ananassa HOM05D006565 ORTHO05D008717 3.8e-50 203.0 253 48.2
PSO384G3661 Papaver somniferum HOM05D006565 ORTHO05D008717 4.9e-50 202.6 163 58.9
Glyma.10G195001 Glycine max HOM05D006565 ORTHO05D008717 1.2e-48 198.0 107 84.1
Hma1.2p1_0098F.1_g048200 Hydrangea macrophylla HOM05D006565 ORTHO05D008717 1.9e-41 174.1 108 75.9
FAN10G0629 Fragaria x ananassa HOM05D006565 ORTHO05D008717 4.2e-41 172.9 186 53.2
FAN03G2487 Fragaria x ananassa HOM05D006565 ORTHO05D008717 5.4e-41 172.6 186 53.2
Lj3A922G55 Lonicera japonica HOM05D006565 ORTHO05D008717 1.1e-33 148.3 94 77.7
Cpa.g.sc33.129 Carica papaya HOM05D006565 ORTHO05D008717 9.3e-33 145.2 99 67.7
Cpa.g.sc33.128 Carica papaya HOM05D006565 ORTHO05D008717 1.1e-30 138.3 82 79.3
CSS0040424 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 1.2e-24 118.2 73 74.0
Aqoxy6G01578 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 1.4e-20 104.8 144 43.1
RhsimUnG0214900 Rhododendron simsii HOM05D006565 ORTHO05D008717 2.9e-18 97.1 82 62.2
CSS0049814 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 3.8e-18 96.7 73 67.1
MBI15_g31580_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 2.1e-16 90.9 60 75.0
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.6e-16 89.7 80 61.2
Glyma.10G195100 Glycine max HOM05D006565 ORTHO05D025622 3.7e-13 80.1 82 57.3
Psat7g239080 Pisum sativum HOM05D005767 ORTHO05D006785 1.3e-10 71.6 81 49.4
TPR.G13189 Trifolium pratense HOM05D006565 ORTHO05D025622 1.3e-10 71.6 80 57.5
MBI17_g02193_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D011977 2.2e-10 70.9 44 81.8
MBI05_g33289_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 1.1e-09 68.6 45 71.1
Aqoxy6G01581 Aquilegia oxysepala HOM05D006565 ORTHO05D000596 1.9e-09 67.8 41 70.7
arahy.Tifrunner.gnm1.ann1.6WDS79 Arachis hypogaea HOM05D006565 ORTHO05D086099 2.7e-08 63.9 34 94.1
MBI06_g14037_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 6.7e-07 59.3 42 71.4
COL.COLO4_26864 Corchorus olitorius HOM05D002341 ORTHO05D003165 4.4e-06 56.6 34 73.5


User provided reference genes

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